RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 C3orf80F5H4A9 247 aa8.06□□□□□ -1.12
CAPN3-211ENST00000562199 RSPH4AQ5TD94 716 aa8.06□□□□□ -1.12
CAPN3-211ENST00000562199 PNMA3Q9UL41 463 aa8.05□□□□□ -1.12
CAPN3-211ENST00000562199 DCAF1Q9Y4B6 1507 aa8.04□□□□□ -1.12
CAPN3-211ENST00000562199 ZNF326Q5BKZ1 582 aaKnown RBP8.04□□□□□ -1.12
CAPN3-211ENST00000562199 IFFO2Q5TF58 517 aa8.04□□□□□ -1.12
CAPN3-211ENST00000562199 TATDN2Q93075 761 aa8.04□□□□□ -1.12
CAPN3-211ENST00000562199 TSR3Q9UJK0 312 aaKnown RBP8.04□□□□□ -1.12
CAPN3-211ENST00000562199 A0A0G2JS52 829 aa8.03□□□□□ -1.12
CAPN3-211ENST00000562199 SAMD7Q7Z3H4 446 aa8.03□□□□□ -1.12
CAPN3-211ENST00000562199 CERKQ8TCT0 537 aa8.03□□□□□ -1.12
CAPN3-211ENST00000562199 PPP4CP60510 307 aa8.02□□□□□ -1.13
CAPN3-211ENST00000562199 MLLT3P42568 568 aaPredicted RBP8.01□□□□□ -1.13
CAPN3-211ENST00000562199 NYAP1Q6ZVC0 841 aa8.01□□□□□ -1.13
CAPN3-211ENST00000562199 NUDT18Q6ZVK8 323 aa8.01□□□□□ -1.13
CAPN3-211ENST00000562199 POLR3GLQ9BT43 218 aa8.01□□□□□ -1.13
CAPN3-211ENST00000562199 ZBTB7CA1YPR0 619 aa8□□□□□ -1.13
CAPN3-211ENST00000562199 NBPF26B4DH59 902 aa8□□□□□ -1.13
CAPN3-211ENST00000562199 ITGBL1O95965 494 aaPredicted RBP8□□□□□ -1.13
CAPN3-211ENST00000562199 KCNC4Q03721 635 aa8□□□□□ -1.13
CAPN3-211ENST00000562199 KCNV2Q8TDN2 545 aa8□□□□□ -1.13
CAPN3-211ENST00000562199 RNF40O75150 1001 aa7.99□□□□□ -1.13
CAPN3-211ENST00000562199 PADI6Q6TGC4 694 aa7.99□□□□□ -1.13
CAPN3-211ENST00000562199 ARHGEF1Q92888 912 aaKnown RBP7.99□□□□□ -1.13
CAPN3-211ENST00000562199 NPDC1Q9NQX5 325 aaPredicted RBP7.99□□□□□ -1.13
CAPN3-211ENST00000562199 HDGFP51858 240 aaKnown RBP7.97□□□□□ -1.13
CAPN3-211ENST00000562199 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.96□□□□□ -1.14
CAPN3-211ENST00000562199 RGS20O76081 388 aa7.95□□□□□ -1.14
CAPN3-211ENST00000562199 SWT1Q5T5J6 900 aaKnown RBP7.93□□□□□ -1.14
CAPN3-211ENST00000562199 TTC13Q8NBP0 860 aa7.93□□□□□ -1.14
CAPN3-211ENST00000562199 IRX2Q9BZI1 471 aaPredicted RBP7.93□□□□□ -1.14
CAPN3-211ENST00000562199 RSPH6AQ9H0K4 717 aa7.93□□□□□ -1.14
CAPN3-211ENST00000562199 RBM27Q9P2N5 1060 aaKnown RBP7.93□□□□□ -1.14
CAPN3-211ENST00000562199 NUTM2FA1L443 756 aa7.92□□□□□ -1.14
CAPN3-211ENST00000562199 NECTIN2Q92692 538 aa7.92□□□□□ -1.14
CAPN3-211ENST00000562199 TJAP1Q5JTD0 557 aa7.91□□□□□ -1.14
CAPN3-211ENST00000562199 TICAM2Q86XR7 235 aa7.91□□□□□ -1.14
CAPN3-211ENST00000562199 MTRQ99707 1265 aa7.91□□□□□ -1.14
CAPN3-211ENST00000562199 SEMA3EO15041 775 aa7.9□□□□□ -1.14
CAPN3-211ENST00000562199 APLP1P51693 650 aa7.9□□□□□ -1.14
CAPN3-211ENST00000562199 ZNF516Q92618 1163 aa7.9□□□□□ -1.14
CAPN3-211ENST00000562199 EYA1Q99502 592 aa7.9□□□□□ -1.14
CAPN3-211ENST00000562199 ZEB1P37275 1124 aaPredicted RBP7.89□□□□□ -1.15
CAPN3-211ENST00000562199 PTGDRQ13258 359 aa7.89□□□□□ -1.15
CAPN3-211ENST00000562199 AAMPQ13685 434 aa7.89□□□□□ -1.15
CAPN3-211ENST00000562199 FAM161AQ3B820 660 aa7.89□□□□□ -1.15
CAPN3-211ENST00000562199 PCGF6Q9BYE7 350 aa7.89□□□□□ -1.15
CAPN3-211ENST00000562199 CCDC136Q96JN2 1154 aa7.88□□□□□ -1.15
CAPN3-211ENST00000562199 IL21Q9HBE4 155 aa7.88□□□□□ -1.15
CAPN3-211ENST00000562199 COPS2P61201 443 aa7.87□□□□□ -1.15
CAPN3-211ENST00000562199 P3H3Q8IVL6 736 aa7.87□□□□□ -1.15
CAPN3-211ENST00000562199 SLF2Q8IX21 1173 aa7.87□□□□□ -1.15
CAPN3-211ENST00000562199 ARID3AQ99856 593 aa7.87□□□□□ -1.15
CAPN3-211ENST00000562199 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.87□□□□□ -1.15
CAPN3-211ENST00000562199 CLSTN1O94985 981 aa7.86□□□□□ -1.15
CAPN3-211ENST00000562199 NAP1L5Q96NT1 182 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-211ENST00000562199 ANP32EQ9BTT0 268 aa7.86□□□□□ -1.15
CAPN3-211ENST00000562199 PPP1R18Q6NYC8 613 aa7.85□□□□□ -1.15
CAPN3-211ENST00000562199 NKX2-3Q8TAU0 364 aa7.85□□□□□ -1.15
CAPN3-211ENST00000562199 ABCC9O60706 1549 aa7.84□□□□□ -1.15
CAPN3-211ENST00000562199 SLC4A3P48751 1232 aa7.84□□□□□ -1.15
CAPN3-211ENST00000562199 RBM46Q8TBY0 533 aaKnown RBP7.83□□□□□ -1.16
CAPN3-211ENST00000562199 ADGRG1Q9Y653 693 aa7.83□□□□□ -1.16
CAPN3-211ENST00000562199 RCCD1A6NED2 376 aa7.82□□□□□ -1.16
CAPN3-211ENST00000562199 FCHSD2O94868 740 aa7.82□□□□□ -1.16
CAPN3-211ENST00000562199 DNAJB2P25686 324 aa7.82□□□□□ -1.16
CAPN3-211ENST00000562199 RBM26Q5T8P6 1007 aaKnown RBP7.82□□□□□ -1.16
CAPN3-211ENST00000562199 PPARGC1BQ86YN6 1023 aaKnown RBP7.82□□□□□ -1.16
CAPN3-211ENST00000562199 ZNF592Q92610 1267 aa7.82□□□□□ -1.16
CAPN3-211ENST00000562199 ZMYND15Q9H091 742 aa7.82□□□□□ -1.16
CAPN3-211ENST00000562199 Q6ZNB5 142 aa7.81□□□□□ -1.16
CAPN3-211ENST00000562199 PRKD2Q9BZL6 878 aa7.81□□□□□ -1.16
CAPN3-211ENST00000562199 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.81□□□□□ -1.16
CAPN3-211ENST00000562199 BRPF3Q9ULD4 1205 aa7.81□□□□□ -1.16
CAPN3-211ENST00000562199 IRX6P78412 446 aaPredicted RBP7.8□□□□□ -1.16
CAPN3-211ENST00000562199 PSMD1Q99460 953 aa7.8□□□□□ -1.16
CAPN3-211ENST00000562199 PCDHB3Q9Y5E6 796 aa7.8□□□□□ -1.16
CAPN3-211ENST00000562199 CLSPNQ9HAW4 1339 aa7.79□□□□□ -1.16
CAPN3-211ENST00000562199 TMEM134Q9H6X4 195 aa7.79□□□□□ -1.16
CAPN3-211ENST00000562199 GFRA3O60609 400 aa7.78□□□□□ -1.16
CAPN3-211ENST00000562199 ZPR1O75312 459 aa7.78□□□□□ -1.16
CAPN3-211ENST00000562199 BRPF1P55201 1214 aaPredicted RBP7.78□□□□□ -1.16
CAPN3-211ENST00000562199 BLOC1S3Q6QNY0 202 aa7.78□□□□□ -1.16
CAPN3-211ENST00000562199 RGS22Q8NE09 1264 aa7.78□□□□□ -1.16
CAPN3-211ENST00000562199 A0A0U1RQG5 324 aaPredicted RBP7.77□□□□□ -1.17
CAPN3-211ENST00000562199 TESPA1A2RU30 521 aaPredicted RBP7.77□□□□□ -1.17
CAPN3-211ENST00000562199 RAD21O60216 631 aa7.77□□□□□ -1.17
CAPN3-211ENST00000562199 ERICH6BQ5W0A0 696 aa7.77□□□□□ -1.17
CAPN3-211ENST00000562199 CC2D2BQ6DHV5 1058 aa7.77□□□□□ -1.17
CAPN3-211ENST00000562199 KCTD17Q8N5Z5 321 aa7.77□□□□□ -1.17
CAPN3-211ENST00000562199 C1orf115Q9H7X2 142 aa7.77□□□□□ -1.17
CAPN3-211ENST00000562199 FECHP22830 423 aa7.76□□□□□ -1.17
CAPN3-211ENST00000562199 SMYD5Q6GMV2 418 aa7.76□□□□□ -1.17
CAPN3-211ENST00000562199 PRR14Q9BWN1 585 aa7.76□□□□□ -1.17
CAPN3-211ENST00000562199 CFHP08603 1231 aa7.75□□□□□ -1.17
CAPN3-211ENST00000562199 SLC10A3P09131 477 aa7.75□□□□□ -1.17
CAPN3-211ENST00000562199 CERS3Q8IU89 383 aa7.75□□□□□ -1.17
CAPN3-211ENST00000562199 TLL1O43897 1013 aa7.74□□□□□ -1.17
CAPN3-211ENST00000562199 OATP04181 439 aa7.74□□□□□ -1.17
CAPN3-211ENST00000562199 GGCXP38435 758 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms