RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 NCKAP5LQ9HCH0 1330 aa19.85■□□□□ 0.77
CDH1-204ENST00000562118 DMRT2Q9Y5R5 561 aa19.85■□□□□ 0.77
CDH1-204ENST00000562118 NRXN3Q9Y4C0 1643 aa19.84■□□□□ 0.77
CDH1-204ENST00000562118 SETBP1Q9Y6X0 1596 aa19.83■□□□□ 0.77
CDH1-204ENST00000562118 DHX57Q6P158 1386 aaKnown RBP19.83■□□□□ 0.76
CDH1-204ENST00000562118 DIP2AQ14689 1571 aa19.82■□□□□ 0.76
CDH1-204ENST00000562118 PLEKHG1Q9ULL1 1385 aa19.82■□□□□ 0.76
CDH1-204ENST00000562118 LTBP4Q8N2S1 1624 aa19.81■□□□□ 0.76
CDH1-204ENST00000562118 SETD1AO15047 1707 aaKnown RBP19.8■□□□□ 0.76
CDH1-204ENST00000562118 STAG3Q9UJ98 1225 aa19.8■□□□□ 0.76
CDH1-204ENST00000562118 TXNDC2Q86VQ3 553 aa19.79■□□□□ 0.76
CDH1-204ENST00000562118 RPGRIP1LQ68CZ1 1315 aa19.78■□□□□ 0.76
CDH1-204ENST00000562118 EID1Q9Y6B2 187 aa19.78■□□□□ 0.76
CDH1-204ENST00000562118 STRCP1A6NGW2 1772 aa19.78■□□□□ 0.76
CDH1-204ENST00000562118 ADAMTS13Q76LX8 1427 aa19.77■□□□□ 0.76
CDH1-204ENST00000562118 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.77■□□□□ 0.76
CDH1-204ENST00000562118 NWD1Q149M9 1564 aa19.77■□□□□ 0.76
CDH1-204ENST00000562118 MYOM2P54296 1465 aa19.76■□□□□ 0.75
CDH1-204ENST00000562118 NRXN1Q9ULB1 1477 aa19.76■□□□□ 0.75
CDH1-204ENST00000562118 CHD2O14647 1828 aaKnown RBP19.74■□□□□ 0.75
CDH1-204ENST00000562118 HDGFP51858 240 aaKnown RBP19.74■□□□□ 0.75
CDH1-204ENST00000562118 CHGAP10645 457 aaKnown RBP19.72■□□□□ 0.75
CDH1-204ENST00000562118 CPS1P31327 1500 aa19.71■□□□□ 0.75
CDH1-204ENST00000562118 PCGF6Q9BYE7 350 aa19.7■□□□□ 0.74
CDH1-204ENST00000562118 PIK3C2GO75747 1445 aa19.69■□□□□ 0.74
CDH1-204ENST00000562118 IQSEC2Q5JU85 1478 aa19.69■□□□□ 0.74
CDH1-204ENST00000562118 XRN1Q8IZH2 1706 aaKnown RBP19.69■□□□□ 0.74
CDH1-204ENST00000562118 PIK3R4Q99570 1358 aa19.69■□□□□ 0.74
CDH1-204ENST00000562118 PRAG1Q86YV5 1406 aa19.68■□□□□ 0.74
CDH1-204ENST00000562118 LAMC1P11047 1609 aa19.68■□□□□ 0.74
CDH1-204ENST00000562118 ALKQ9UM73 1620 aa19.67■□□□□ 0.74
CDH1-204ENST00000562118 TBX22Q9Y458 520 aa19.67■□□□□ 0.74
CDH1-204ENST00000562118 VGFO15240 615 aaPredicted RBP19.66■□□□□ 0.74
CDH1-204ENST00000562118 ZNF326Q5BKZ1 582 aaKnown RBP19.66■□□□□ 0.74
CDH1-204ENST00000562118 XIRP1Q702N8 1843 aaKnown RBP19.66■□□□□ 0.74
CDH1-204ENST00000562118 ZNF335Q9H4Z2 1342 aaPredicted RBP19.66■□□□□ 0.74
CDH1-204ENST00000562118 NKTRP30414 1462 aaKnown RBP19.66■□□□□ 0.74
CDH1-204ENST00000562118 PPP1R15AO75807 674 aaPredicted RBP19.64■□□□□ 0.73
CDH1-204ENST00000562118 STAC3Q96MF2 364 aa19.64■□□□□ 0.73
CDH1-204ENST00000562118 ASXL1Q8IXJ9 1541 aa19.63■□□□□ 0.73
CDH1-204ENST00000562118 ADGRF5Q8IZF2 1346 aa19.62■□□□□ 0.73
CDH1-204ENST00000562118 NUTM2DQ5VT03 806 aaPredicted RBP19.62■□□□□ 0.73
CDH1-204ENST00000562118 PTPRUQ92729 1446 aa19.61■□□□□ 0.73
CDH1-204ENST00000562118 KNDC1Q76NI1 1749 aa19.61■□□□□ 0.73
CDH1-204ENST00000562118 KIAA1210Q9ULL0 1709 aa19.61■□□□□ 0.73
CDH1-204ENST00000562118 LRRC7Q96NW7 1537 aa19.61■□□□□ 0.73
CDH1-204ENST00000562118 CLSPNQ9HAW4 1339 aa19.6■□□□□ 0.73
CDH1-204ENST00000562118 RGL3Q3MIN7 710 aa19.6■□□□□ 0.73
CDH1-204ENST00000562118 SLC26A8Q96RN1 970 aa19.6■□□□□ 0.73
CDH1-204ENST00000562118 METP08581 1390 aa19.58■□□□□ 0.73
CDH1-204ENST00000562118 KCNA6P17658 529 aa19.58■□□□□ 0.72
CDH1-204ENST00000562118 ADGRB1O14514 1584 aa19.57■□□□□ 0.72
CDH1-204ENST00000562118 TECPR2O15040 1411 aa19.56■□□□□ 0.72
CDH1-204ENST00000562118 PTCH1Q13635 1447 aa19.55■□□□□ 0.72
CDH1-204ENST00000562118 SIN3AQ96ST3 1273 aa19.55■□□□□ 0.72
CDH1-204ENST00000562118 NCOA3Q9Y6Q9 1424 aa19.54■□□□□ 0.72
CDH1-204ENST00000562118 CERKQ8TCT0 537 aa19.54■□□□□ 0.72
CDH1-204ENST00000562118 C14orf93Q9H972 538 aaKnown RBP19.53■□□□□ 0.72
CDH1-204ENST00000562118 TRPM1Q7Z4N2 1603 aa19.51■□□□□ 0.71
CDH1-204ENST00000562118 DCAF11Q8TEB1 546 aa19.5■□□□□ 0.71
CDH1-204ENST00000562118 L3MBTL2Q969R5 705 aa19.49■□□□□ 0.71
CDH1-204ENST00000562118 DLC1Q96QB1 1528 aa19.49■□□□□ 0.71
CDH1-204ENST00000562118 LRPPRCP42704 1394 aaKnown RBP19.48■□□□□ 0.71
CDH1-204ENST00000562118 BCANQ96GW7 911 aa19.48■□□□□ 0.71
CDH1-204ENST00000562118 ABCC11Q96J66 1382 aa19.47■□□□□ 0.71
CDH1-204ENST00000562118 NALCNQ8IZF0 1738 aa19.47■□□□□ 0.71
CDH1-204ENST00000562118 TMEM94Q12767 1356 aa19.46■□□□□ 0.71
CDH1-204ENST00000562118 YTHDC2Q9H6S0 1430 aaKnown RBP19.46■□□□□ 0.71
CDH1-204ENST00000562118 AMOTL2Q9Y2J4 779 aa19.46■□□□□ 0.71
CDH1-204ENST00000562118 CFAP70Q5T0N1 1121 aa19.44■□□□□ 0.7
CDH1-204ENST00000562118 ARHGEF28Q8N1W1 1705 aaKnown RBP19.44■□□□□ 0.7
CDH1-204ENST00000562118 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.44■□□□□ 0.7
CDH1-204ENST00000562118 ROBO2Q9HCK4 1378 aa19.44■□□□□ 0.7
CDH1-204ENST00000562118 FAM135BQ49AJ0 1406 aa19.43■□□□□ 0.7
CDH1-204ENST00000562118 SENP3Q9H4L4 574 aaPredicted RBP19.43■□□□□ 0.7
CDH1-204ENST00000562118 DCCP43146 1447 aa19.42■□□□□ 0.7
CDH1-204ENST00000562118 NEUROD1Q13562 356 aa19.41■□□□□ 0.7
CDH1-204ENST00000562118 SIRT1Q96EB6 747 aa19.41■□□□□ 0.7
CDH1-204ENST00000562118 ADGRL3Q9HAR2 1447 aa19.41■□□□□ 0.7
CDH1-204ENST00000562118 TIMELESSQ9UNS1 1208 aa19.4■□□□□ 0.7
CDH1-204ENST00000562118 KDM2AQ9Y2K7 1162 aa19.4■□□□□ 0.7
CDH1-204ENST00000562118 TONSLQ96HA7 1378 aa19.4■□□□□ 0.7
CDH1-204ENST00000562118 PROSER2Q86WR7 435 aaPredicted RBP19.39■□□□□ 0.69
CDH1-204ENST00000562118 GPRASP1Q5JY77 1395 aa19.39■□□□□ 0.69
CDH1-204ENST00000562118 RALGAPBQ86X10 1494 aa19.39■□□□□ 0.69
CDH1-204ENST00000562118 ADGRB2O60241 1585 aa19.39■□□□□ 0.69
CDH1-204ENST00000562118 CDC42BPGQ6DT37 1551 aa19.39■□□□□ 0.69
CDH1-204ENST00000562118 TMEM132EQ6IEE7 984 aa19.37■□□□□ 0.69
CDH1-204ENST00000562118 FBXO41Q8TF61 875 aa19.36■□□□□ 0.69
CDH1-204ENST00000562118 MSH6P52701 1360 aa19.34■□□□□ 0.69
CDH1-204ENST00000562118 NBPF8Q3BBV2 869 aa19.34■□□□□ 0.69
CDH1-204ENST00000562118 PLEKHH1Q9ULM0 1364 aa19.32■□□□□ 0.68
CDH1-204ENST00000562118 CCER1Q8TC90 406 aaPredicted RBP19.32■□□□□ 0.68
CDH1-204ENST00000562118 C19orf44Q9H6X5 657 aa19.32■□□□□ 0.68
CDH1-204ENST00000562118 FMN2Q9NZ56 1722 aa19.31■□□□□ 0.68
CDH1-204ENST00000562118 NBPF1Q3BBV0 1214 aa19.31■□□□□ 0.68
CDH1-204ENST00000562118 RBM33Q96EV2 1170 aaKnown RBP19.3■□□□□ 0.68
CDH1-204ENST00000562118 MST1RQ04912 1400 aa19.29■□□□□ 0.68
CDH1-204ENST00000562118 ROBO1Q9Y6N7 1651 aa19.28■□□□□ 0.68
CDH1-204ENST00000562118 TOM1O60784 492 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms