RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 LMTK2Q8IWU2 1503 aa18.31■□□□□ 0.52
NSMCE1-202ENST00000561960 ANKRD30AQ9BXX3 1397 aa18.3■□□□□ 0.52
NSMCE1-202ENST00000561960 KCNA6P17658 529 aa18.3■□□□□ 0.52
NSMCE1-202ENST00000561960 FAM50AQ14320 339 aaKnown RBP18.3■□□□□ 0.52
NSMCE1-202ENST00000561960 FAM135BQ49AJ0 1406 aa18.3■□□□□ 0.52
NSMCE1-202ENST00000561960 NOS1P29475 1434 aa18.28■□□□□ 0.52
NSMCE1-202ENST00000561960 CHGAP10645 457 aaKnown RBP18.27■□□□□ 0.52
NSMCE1-202ENST00000561960 TMEM131LA2VDJ0 1609 aa18.26■□□□□ 0.51
NSMCE1-202ENST00000561960 PPP1R15AO75807 674 aaPredicted RBP18.25■□□□□ 0.51
NSMCE1-202ENST00000561960 MSH6P52701 1360 aa18.25■□□□□ 0.51
NSMCE1-202ENST00000561960 NKTRP30414 1462 aaKnown RBP18.25■□□□□ 0.51
NSMCE1-202ENST00000561960 E9PCH4 1651 aa18.25■□□□□ 0.51
NSMCE1-202ENST00000561960 RIMS2Q9UQ26 1411 aa18.23■□□□□ 0.51
NSMCE1-202ENST00000561960 COL16A1Q07092 1604 aaPredicted RBP18.23■□□□□ 0.51
NSMCE1-202ENST00000561960 ZFYVE9O95405 1425 aa18.23■□□□□ 0.51
NSMCE1-202ENST00000561960 C14orf37Q86TY3 774 aa18.22■□□□□ 0.51
NSMCE1-202ENST00000561960 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.22■□□□□ 0.51
NSMCE1-202ENST00000561960 LRP6O75581 1613 aa18.21■□□□□ 0.51
NSMCE1-202ENST00000561960 SLAIN2Q9P270 581 aa18.21■□□□□ 0.51
NSMCE1-202ENST00000561960 ADGRL2O95490 1459 aa18.2■□□□□ 0.5
NSMCE1-202ENST00000561960 ANKRD50Q9ULJ7 1429 aa18.2■□□□□ 0.5
NSMCE1-202ENST00000561960 UNC13BO14795 1591 aa18.18■□□□□ 0.5
NSMCE1-202ENST00000561960 PLEKHG1Q9ULL1 1385 aa18.17■□□□□ 0.5
NSMCE1-202ENST00000561960 TRIM52Q96A61 297 aa18.16■□□□□ 0.5
NSMCE1-202ENST00000561960 SLC52A1Q9NWF4 448 aa18.16■□□□□ 0.5
NSMCE1-202ENST00000561960 ITGAEP38570 1179 aa18.15■□□□□ 0.5
NSMCE1-202ENST00000561960 MEX3CQ5U5Q3 659 aaKnown RBP18.15■□□□□ 0.5
NSMCE1-202ENST00000561960 JCADQ9P266 1359 aa18.15■□□□□ 0.5
NSMCE1-202ENST00000561960 PPARGC1BQ86YN6 1023 aaKnown RBP18.14■□□□□ 0.49
NSMCE1-202ENST00000561960 RPRD2Q5VT52 1461 aaKnown RBP18.14■□□□□ 0.49
NSMCE1-202ENST00000561960 ADAMTS13Q76LX8 1427 aa18.13■□□□□ 0.49
NSMCE1-202ENST00000561960 SHPRHQ149N8 1683 aa18.12■□□□□ 0.49
NSMCE1-202ENST00000561960 NUTM2BA6NNL0 878 aaPredicted RBP18.12■□□□□ 0.49
NSMCE1-202ENST00000561960 NUTM2EB1AL46 878 aaPredicted RBP18.12■□□□□ 0.49
NSMCE1-202ENST00000561960 NUTM2AQ8IVF1 878 aaPredicted RBP18.12■□□□□ 0.49
NSMCE1-202ENST00000561960 IQGAP3Q86VI3 1631 aa18.12■□□□□ 0.49
NSMCE1-202ENST00000561960 PTPRUQ92729 1446 aa18.1■□□□□ 0.49
NSMCE1-202ENST00000561960 NRXN3Q9Y4C0 1643 aa18.09■□□□□ 0.49
NSMCE1-202ENST00000561960 AHDC1Q5TGY3 1603 aaPredicted RBP18.09■□□□□ 0.49
NSMCE1-202ENST00000561960 SPHKAPQ2M3C7 1700 aa18.08■□□□□ 0.48
NSMCE1-202ENST00000561960 ATF3P18847 181 aa18.07■□□□□ 0.48
NSMCE1-202ENST00000561960 DDX17Q92841 729 aaKnown RBP18.07■□□□□ 0.48
NSMCE1-202ENST00000561960 DIP2AQ14689 1571 aa18.07■□□□□ 0.48
NSMCE1-202ENST00000561960 TRPM2O94759 1503 aa18.07■□□□□ 0.48
NSMCE1-202ENST00000561960 AMOTL2Q9Y2J4 779 aa18.06■□□□□ 0.48
NSMCE1-202ENST00000561960 TBX22Q9Y458 520 aa18.06■□□□□ 0.48
NSMCE1-202ENST00000561960 XRN1Q8IZH2 1706 aaKnown RBP18.05■□□□□ 0.48
NSMCE1-202ENST00000561960 NALCNQ8IZF0 1738 aa18.04■□□□□ 0.48
NSMCE1-202ENST00000561960 BRINP3Q76B58 766 aa18.04■□□□□ 0.48
NSMCE1-202ENST00000561960 HDGFP51858 240 aaKnown RBP18.03■□□□□ 0.48
NSMCE1-202ENST00000561960 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.03■□□□□ 0.48
NSMCE1-202ENST00000561960 NUP155O75694 1391 aa18.03■□□□□ 0.48
NSMCE1-202ENST00000561960 ASXL1Q8IXJ9 1541 aa18.03■□□□□ 0.48
NSMCE1-202ENST00000561960 NHSL1Q5SYE7 1610 aa18.02■□□□□ 0.48
NSMCE1-202ENST00000561960 C19orf44Q9H6X5 657 aa18.02■□□□□ 0.48
NSMCE1-202ENST00000561960 SPATA31A6Q5VVP1 1343 aa18.01■□□□□ 0.47
NSMCE1-202ENST00000561960 ZNF326Q5BKZ1 582 aaKnown RBP18.01■□□□□ 0.47
NSMCE1-202ENST00000561960 CADPS2Q86UW7 1296 aa18.01■□□□□ 0.47
NSMCE1-202ENST00000561960 UPF1Q92900 1129 aaKnown RBP eCLIP18.01■□□□□ 0.47
NSMCE1-202ENST00000561960 SRCAPQ6ZRS2 3230 aa18■□□□□ 0.47
NSMCE1-202ENST00000561960 CLTCL1P53675 1640 aa18■□□□□ 0.47
NSMCE1-202ENST00000561960 METP08581 1390 aa17.99■□□□□ 0.47
NSMCE1-202ENST00000561960 AFF2P51816 1311 aa17.98■□□□□ 0.47
NSMCE1-202ENST00000561960 ZNF772Q68DY9 489 aaPredicted RBP17.98■□□□□ 0.47
NSMCE1-202ENST00000561960 MST1RQ04912 1400 aa17.97■□□□□ 0.47
NSMCE1-202ENST00000561960 NCOA3Q9Y6Q9 1424 aa17.97■□□□□ 0.47
NSMCE1-202ENST00000561960 SETBP1Q9Y6X0 1596 aa17.96■□□□□ 0.47
NSMCE1-202ENST00000561960 KIF1BO60333 1816 aa17.96■□□□□ 0.47
NSMCE1-202ENST00000561960 RXRBP28702 533 aa17.96■□□□□ 0.47
NSMCE1-202ENST00000561960 C8orf37Q96NL8 207 aa17.96■□□□□ 0.47
NSMCE1-202ENST00000561960 PIK3R4Q99570 1358 aa17.94■□□□□ 0.46
NSMCE1-202ENST00000561960 NEXMIFQ5QGS0 1516 aa17.93■□□□□ 0.46
NSMCE1-202ENST00000561960 ROCK1Q13464 1354 aa17.93■□□□□ 0.46
NSMCE1-202ENST00000561960 RGS12O14924 1447 aa17.92■□□□□ 0.46
NSMCE1-202ENST00000561960 ADAMTS2O95450 1211 aa17.92■□□□□ 0.46
NSMCE1-202ENST00000561960 EP400Q96L91 3159 aa17.91■□□□□ 0.46
NSMCE1-202ENST00000561960 PNPLA6Q8IY17 1366 aa17.89■□□□□ 0.45
NSMCE1-202ENST00000561960 DCCP43146 1447 aa17.89■□□□□ 0.45
NSMCE1-202ENST00000561960 SETD5Q9C0A6 1442 aa17.89■□□□□ 0.45
NSMCE1-202ENST00000561960 ADGRL3Q9HAR2 1447 aa17.89■□□□□ 0.45
NSMCE1-202ENST00000561960 QTRT2Q9H974 415 aaKnown RBP17.87■□□□□ 0.45
NSMCE1-202ENST00000561960 ORAI2Q96SN7 254 aa17.85■□□□□ 0.45
NSMCE1-202ENST00000561960 LRRC59Q96AG4 307 aaKnown RBP17.84■□□□□ 0.45
NSMCE1-202ENST00000561960 C1orf167Q5SNV9 1468 aa17.83■□□□□ 0.45
NSMCE1-202ENST00000561960 ROBO2Q9HCK4 1378 aa17.83■□□□□ 0.45
NSMCE1-202ENST00000561960 NGLY1Q96IV0 654 aa17.83■□□□□ 0.44
NSMCE1-202ENST00000561960 PPLO60437 1756 aa17.83■□□□□ 0.44
NSMCE1-202ENST00000561960 CDK12Q9NYV4 1490 aaPredicted RBP17.82■□□□□ 0.44
NSMCE1-202ENST00000561960 XPCQ01831 940 aaPredicted RBP17.81■□□□□ 0.44
NSMCE1-202ENST00000561960 MARF1Q9Y4F3 1742 aaKnown RBP17.79■□□□□ 0.44
NSMCE1-202ENST00000561960 NUTM2FA1L443 756 aa17.79■□□□□ 0.44
NSMCE1-202ENST00000561960 RBM6P78332 1123 aaKnown RBP17.79■□□□□ 0.44
NSMCE1-202ENST00000561960 FOXD1Q16676 465 aa17.78■□□□□ 0.44
NSMCE1-202ENST00000561960 LAMC1P11047 1609 aa17.78■□□□□ 0.44
NSMCE1-202ENST00000561960 PLEKHG5O94827 1062 aa17.77■□□□□ 0.44
NSMCE1-202ENST00000561960 NAIPQ13075 1403 aa17.76■□□□□ 0.43
NSMCE1-202ENST00000561960 USP21Q9UK80 565 aa17.76■□□□□ 0.43
NSMCE1-202ENST00000561960 PTCH1Q13635 1447 aa17.74■□□□□ 0.43
NSMCE1-202ENST00000561960 RGPD8O14715 1765 aaPredicted RBP17.74■□□□□ 0.43
NSMCE1-202ENST00000561960 COL22A1Q8NFW1 1626 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms