RNA–Protein interactions for RNA: ENST00000561838.1

ITGAM-203, Transcript of integrin subunit alpha M, humanhuman

TSL 4

Gene ITGAM, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-203ENST00000561838 NCOA3Q9Y6Q9 1424 aa20.3■□□□□ 0.84
ITGAM-203ENST00000561838 BCANQ96GW7 911 aa20.3■□□□□ 0.84
ITGAM-203ENST00000561838 JCADQ9P266 1359 aa20.3■□□□□ 0.84
ITGAM-203ENST00000561838 FGD6Q6ZV73 1430 aa20.29■□□□□ 0.84
ITGAM-203ENST00000561838 PLEKHG1Q9ULL1 1385 aa20.27■□□□□ 0.84
ITGAM-203ENST00000561838 PHLPP1O60346 1717 aa20.26■□□□□ 0.83
ITGAM-203ENST00000561838 LOC105371045A0A1W2PR82 267 aa20.25■□□□□ 0.83
ITGAM-203ENST00000561838 CHIC2Q9UKJ5 165 aa20.25■□□□□ 0.83
ITGAM-203ENST00000561838 CHD2O14647 1828 aaKnown RBP20.25■□□□□ 0.83
ITGAM-203ENST00000561838 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.24■□□□□ 0.83
ITGAM-203ENST00000561838 TBX22Q9Y458 520 aa20.24■□□□□ 0.83
ITGAM-203ENST00000561838 ADGRL2O95490 1459 aa20.24■□□□□ 0.83
ITGAM-203ENST00000561838 PPP1R15AO75807 674 aaPredicted RBP20.23■□□□□ 0.83
ITGAM-203ENST00000561838 ZFYVE9O95405 1425 aa20.23■□□□□ 0.83
ITGAM-203ENST00000561838 RBM33Q96EV2 1170 aaKnown RBP20.23■□□□□ 0.83
ITGAM-203ENST00000561838 SPATA31A6Q5VVP1 1343 aa20.23■□□□□ 0.83
ITGAM-203ENST00000561838 RIMS2Q9UQ26 1411 aa20.2■□□□□ 0.82
ITGAM-203ENST00000561838 ZNF772Q68DY9 489 aaPredicted RBP20.2■□□□□ 0.82
ITGAM-203ENST00000561838 PIK3R4Q99570 1358 aa20.2■□□□□ 0.82
ITGAM-203ENST00000561838 CADPS2Q86UW7 1296 aa20.19■□□□□ 0.82
ITGAM-203ENST00000561838 ANKRD50Q9ULJ7 1429 aa20.19■□□□□ 0.82
ITGAM-203ENST00000561838 C19orf44Q9H6X5 657 aa20.17■□□□□ 0.82
ITGAM-203ENST00000561838 COL16A1Q07092 1604 aaPredicted RBP20.16■□□□□ 0.82
ITGAM-203ENST00000561838 C14orf37Q86TY3 774 aa20.16■□□□□ 0.82
ITGAM-203ENST00000561838 DIP2AQ14689 1571 aa20.16■□□□□ 0.82
ITGAM-203ENST00000561838 TMEM131LA2VDJ0 1609 aa20.16■□□□□ 0.82
ITGAM-203ENST00000561838 ATF3P18847 181 aa20.15■□□□□ 0.82
ITGAM-203ENST00000561838 MEX3CQ5U5Q3 659 aaKnown RBP20.15■□□□□ 0.82
ITGAM-203ENST00000561838 GCC2Q8IWJ2 1684 aa20.15■□□□□ 0.82
ITGAM-203ENST00000561838 MYO5BQ9ULV0 1848 aa20.13■□□□□ 0.81
ITGAM-203ENST00000561838 AHDC1Q5TGY3 1603 aaPredicted RBP20.13■□□□□ 0.81
ITGAM-203ENST00000561838 SHPRHQ149N8 1683 aa20.11■□□□□ 0.81
ITGAM-203ENST00000561838 SETD1AO15047 1707 aaKnown RBP20.1■□□□□ 0.81
ITGAM-203ENST00000561838 ADAMTS13Q76LX8 1427 aa20.1■□□□□ 0.81
ITGAM-203ENST00000561838 CHGAP10645 457 aaKnown RBP20.09■□□□□ 0.81
ITGAM-203ENST00000561838 FAM50AQ14320 339 aaKnown RBP20.09■□□□□ 0.81
ITGAM-203ENST00000561838 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.09■□□□□ 0.81
ITGAM-203ENST00000561838 DCCP43146 1447 aa20.08■□□□□ 0.8
ITGAM-203ENST00000561838 UNC13BO14795 1591 aa20.08■□□□□ 0.8
ITGAM-203ENST00000561838 TRPM2O94759 1503 aa20.07■□□□□ 0.8
ITGAM-203ENST00000561838 LRP6O75581 1613 aa20.07■□□□□ 0.8
ITGAM-203ENST00000561838 RXRBP28702 533 aa20.07■□□□□ 0.8
ITGAM-203ENST00000561838 UPF1Q92900 1129 aaKnown RBP eCLIP20.07■□□□□ 0.8
ITGAM-203ENST00000561838 CDK12Q9NYV4 1490 aaPredicted RBP20.06■□□□□ 0.8
ITGAM-203ENST00000561838 AMOTL2Q9Y2J4 779 aa20.05■□□□□ 0.8
ITGAM-203ENST00000561838 BRINP3Q76B58 766 aa20.03■□□□□ 0.8
ITGAM-203ENST00000561838 ROCK1Q13464 1354 aa20.03■□□□□ 0.8
ITGAM-203ENST00000561838 E9PCH4 1651 aa20.03■□□□□ 0.8
ITGAM-203ENST00000561838 TRIM52Q96A61 297 aa20.02■□□□□ 0.8
ITGAM-203ENST00000561838 IQGAP3Q86VI3 1631 aa20.01■□□□□ 0.79
ITGAM-203ENST00000561838 LRRC59Q96AG4 307 aaKnown RBP20■□□□□ 0.79
ITGAM-203ENST00000561838 SETD5Q9C0A6 1442 aa20■□□□□ 0.79
ITGAM-203ENST00000561838 NUTM2DQ5VT03 806 aaPredicted RBP19.99■□□□□ 0.79
ITGAM-203ENST00000561838 ASXL1Q8IXJ9 1541 aa19.97■□□□□ 0.79
ITGAM-203ENST00000561838 PTPRUQ92729 1446 aa19.96■□□□□ 0.79
ITGAM-203ENST00000561838 NUTM2BA6NNL0 878 aaPredicted RBP19.96■□□□□ 0.79
ITGAM-203ENST00000561838 NUTM2EB1AL46 878 aaPredicted RBP19.96■□□□□ 0.79
ITGAM-203ENST00000561838 NUTM2AQ8IVF1 878 aaPredicted RBP19.96■□□□□ 0.79
ITGAM-203ENST00000561838 NUP155O75694 1391 aa19.95■□□□□ 0.79
ITGAM-203ENST00000561838 SETBP1Q9Y6X0 1596 aa19.95■□□□□ 0.78
ITGAM-203ENST00000561838 AFF2P51816 1311 aa19.95■□□□□ 0.78
ITGAM-203ENST00000561838 XRN1Q8IZH2 1706 aaKnown RBP19.94■□□□□ 0.78
ITGAM-203ENST00000561838 NHSL1Q5SYE7 1610 aa19.94■□□□□ 0.78
ITGAM-203ENST00000561838 MST1RQ04912 1400 aa19.93■□□□□ 0.78
ITGAM-203ENST00000561838 RBM6P78332 1123 aaKnown RBP19.92■□□□□ 0.78
ITGAM-203ENST00000561838 FOXD1Q16676 465 aa19.89■□□□□ 0.77
ITGAM-203ENST00000561838 ZNF326Q5BKZ1 582 aaKnown RBP19.89■□□□□ 0.77
ITGAM-203ENST00000561838 NGLY1Q96IV0 654 aa19.89■□□□□ 0.77
ITGAM-203ENST00000561838 QTRT2Q9H974 415 aaKnown RBP19.89■□□□□ 0.77
ITGAM-203ENST00000561838 ADGRL3Q9HAR2 1447 aa19.89■□□□□ 0.77
ITGAM-203ENST00000561838 NRXN3Q9Y4C0 1643 aa19.89■□□□□ 0.77
ITGAM-203ENST00000561838 PNPLA6Q8IY17 1366 aa19.86■□□□□ 0.77
ITGAM-203ENST00000561838 SPHKAPQ2M3C7 1700 aa19.86■□□□□ 0.77
ITGAM-203ENST00000561838 C8orf37Q96NL8 207 aa19.86■□□□□ 0.77
ITGAM-203ENST00000561838 METP08581 1390 aa19.85■□□□□ 0.77
ITGAM-203ENST00000561838 RGS12O14924 1447 aa19.83■□□□□ 0.76
ITGAM-203ENST00000561838 LAMC1P11047 1609 aa19.82■□□□□ 0.76
ITGAM-203ENST00000561838 ATAD2Q6PL18 1390 aa19.81■□□□□ 0.76
ITGAM-203ENST00000561838 C1orf167Q5SNV9 1468 aa19.8■□□□□ 0.76
ITGAM-203ENST00000561838 PTCH1Q13635 1447 aa19.79■□□□□ 0.76
ITGAM-203ENST00000561838 VGFO15240 615 aaPredicted RBP19.79■□□□□ 0.76
ITGAM-203ENST00000561838 NALCNQ8IZF0 1738 aa19.79■□□□□ 0.76
ITGAM-203ENST00000561838 SOS2Q07890 1332 aaPredicted RBP19.78■□□□□ 0.76
ITGAM-203ENST00000561838 NEXMIFQ5QGS0 1516 aa19.78■□□□□ 0.76
ITGAM-203ENST00000561838 TRPC5Q9UL62 973 aaPredicted RBP19.78■□□□□ 0.76
ITGAM-203ENST00000561838 KIF1BO60333 1816 aa19.76■□□□□ 0.75
ITGAM-203ENST00000561838 ADAMTS2O95450 1211 aa19.76■□□□□ 0.75
ITGAM-203ENST00000561838 DDX17Q92841 729 aaKnown RBP19.76■□□□□ 0.75
ITGAM-203ENST00000561838 USP21Q9UK80 565 aa19.76■□□□□ 0.75
ITGAM-203ENST00000561838 PRAG1Q86YV5 1406 aa19.76■□□□□ 0.75
ITGAM-203ENST00000561838 ITGAEP38570 1179 aa19.75■□□□□ 0.75
ITGAM-203ENST00000561838 CCDC125Q86Z20 511 aa19.75■□□□□ 0.75
ITGAM-203ENST00000561838 FNBP4Q8N3X1 1017 aaPredicted RBP19.75■□□□□ 0.75
ITGAM-203ENST00000561838 RPGRIP1LQ68CZ1 1315 aa19.75■□□□□ 0.75
ITGAM-203ENST00000561838 HFM1A2PYH4 1435 aa19.73■□□□□ 0.75
ITGAM-203ENST00000561838 CLTCL1P53675 1640 aa19.73■□□□□ 0.75
ITGAM-203ENST00000561838 ZRANB1Q9UGI0 708 aa19.71■□□□□ 0.75
ITGAM-203ENST00000561838 COL22A1Q8NFW1 1626 aaPredicted RBP19.7■□□□□ 0.74
ITGAM-203ENST00000561838 ORAI2Q96SN7 254 aa19.7■□□□□ 0.74
ITGAM-203ENST00000561838 NPHP3Q7Z494 1330 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms