RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 LSM11P83369 360 aaKnown RBP eCLIP9.68□□□□□ -0.86
CDH1-203ENST00000561751 AXIN2Q9Y2T1 843 aa9.68□□□□□ -0.86
CDH1-203ENST00000561751 CEP170Q5SW79 1584 aa9.67□□□□□ -0.86
CDH1-203ENST00000561751 TOP2BQ02880 1626 aa9.67□□□□□ -0.86
CDH1-203ENST00000561751 MAP3K1Q13233 1512 aa9.66□□□□□ -0.86
CDH1-203ENST00000561751 GRIN2AQ12879 1464 aa9.66□□□□□ -0.86
CDH1-203ENST00000561751 KIF13AQ9H1H9 1805 aa9.66□□□□□ -0.86
CDH1-203ENST00000561751 HNRNPUQ00839 825 aaKnown RBP eCLIP9.66□□□□□ -0.86
CDH1-203ENST00000561751 RTN4Q9NQC3 1192 aaKnown RBP9.66□□□□□ -0.86
CDH1-203ENST00000561751 ABCA10Q8WWZ4 1543 aa9.66□□□□□ -0.86
CDH1-203ENST00000561751 NUP160Q12769 1436 aa9.65□□□□□ -0.86
CDH1-203ENST00000561751 SMG6Q86US8 1419 aaKnown RBP9.65□□□□□ -0.86
CDH1-203ENST00000561751 SHROOM2Q13796 1616 aa9.65□□□□□ -0.86
CDH1-203ENST00000561751 CCNB3Q8WWL7 1395 aa9.64□□□□□ -0.87
CDH1-203ENST00000561751 ADAMTS12P58397 1594 aa9.64□□□□□ -0.87
CDH1-203ENST00000561751 PBX2P40425 430 aa9.64□□□□□ -0.87
CDH1-203ENST00000561751 CRISPLD2Q9H0B8 497 aa9.64□□□□□ -0.87
CDH1-203ENST00000561751 SETD5Q9C0A6 1442 aa9.64□□□□□ -0.87
CDH1-203ENST00000561751 BIVM-ERCC5R4GMW8 1640 aa9.64□□□□□ -0.87
CDH1-203ENST00000561751 GTPBP6O43824 516 aaPredicted RBP9.63□□□□□ -0.87
CDH1-203ENST00000561751 VSIG10Q8N0Z9 540 aa9.63□□□□□ -0.87
CDH1-203ENST00000561751 HSP90AA2PQ14568 343 aaPredicted RBP9.62□□□□□ -0.87
CDH1-203ENST00000561751 FHAD1B1AJZ9 1412 aa9.62□□□□□ -0.87
CDH1-203ENST00000561751 NCKAP5LQ9HCH0 1330 aa9.61□□□□□ -0.87
CDH1-203ENST00000561751 PTGER2P43116 358 aa9.61□□□□□ -0.87
CDH1-203ENST00000561751 B4GALNT3Q6L9W6 998 aa9.61□□□□□ -0.87
CDH1-203ENST00000561751 BRPF3Q9ULD4 1205 aa9.61□□□□□ -0.87
CDH1-203ENST00000561751 L1TD1Q5T7N2 865 aaKnown RBP9.6□□□□□ -0.87
CDH1-203ENST00000561751 RYDENQ9NUL5 291 aaKnown RBP9.6□□□□□ -0.87
CDH1-203ENST00000561751 RAB3GAP2Q9H2M9 1393 aa9.6□□□□□ -0.87
CDH1-203ENST00000561751 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.6□□□□□ -0.87
CDH1-203ENST00000561751 OXER1Q8TDS5 423 aa9.59□□□□□ -0.87
CDH1-203ENST00000561751 BACH2Q9BYV9 841 aa9.59□□□□□ -0.87
CDH1-203ENST00000561751 ERICH3Q5RHP9 1530 aa9.59□□□□□ -0.87
CDH1-203ENST00000561751 IGF1RP08069 1367 aa9.59□□□□□ -0.87
CDH1-203ENST00000561751 PSDA5PKW4 1024 aaPredicted RBP9.58□□□□□ -0.88
CDH1-203ENST00000561751 ARHGAP33O14559 1287 aa9.58□□□□□ -0.88
CDH1-203ENST00000561751 HSP90AA1P07900 732 aaKnown RBP9.58□□□□□ -0.88
CDH1-203ENST00000561751 CALD1Q05682 793 aaKnown RBP9.58□□□□□ -0.88
CDH1-203ENST00000561751 ABCC10Q5T3U5 1492 aa9.58□□□□□ -0.88
CDH1-203ENST00000561751 KIF27Q86VH2 1401 aa9.57□□□□□ -0.88
CDH1-203ENST00000561751 CLCN1P35523 988 aa9.57□□□□□ -0.88
CDH1-203ENST00000561751 PSEN2P49810 448 aa9.57□□□□□ -0.88
CDH1-203ENST00000561751 NFKBIBQ15653 356 aa9.57□□□□□ -0.88
CDH1-203ENST00000561751 PPP1R15BQ5SWA1 713 aa9.57□□□□□ -0.88
CDH1-203ENST00000561751 DMRTA1Q5VZB9 504 aa9.57□□□□□ -0.88
CDH1-203ENST00000561751 UPF1Q92900 1129 aaKnown RBP eCLIP9.57□□□□□ -0.88
CDH1-203ENST00000561751 NCOA2Q15596 1464 aa9.57□□□□□ -0.88
CDH1-203ENST00000561751 DIP2BQ9P265 1576 aa9.57□□□□□ -0.88
CDH1-203ENST00000561751 TBC1D12O60347 775 aa9.56□□□□□ -0.88
CDH1-203ENST00000561751 PDCL3Q9H2J4 239 aa9.56□□□□□ -0.88
CDH1-203ENST00000561751 PDE4AP27815 886 aa9.55□□□□□ -0.88
CDH1-203ENST00000561751 FRAT1Q92837 279 aaPredicted RBP9.55□□□□□ -0.88
CDH1-203ENST00000561751 RUSC2Q8N2Y8 1516 aa9.55□□□□□ -0.88
CDH1-203ENST00000561751 PRG4Q92954 1404 aaPredicted RBP9.55□□□□□ -0.88
CDH1-203ENST00000561751 KDM6BO15054 1643 aa9.54□□□□□ -0.88
CDH1-203ENST00000561751 FGD1P98174 961 aa9.54□□□□□ -0.88
CDH1-203ENST00000561751 ADGRD1Q6QNK2 874 aa9.54□□□□□ -0.88
CDH1-203ENST00000561751 NUDCQ9Y266 331 aa9.54□□□□□ -0.88
CDH1-203ENST00000561751 TPM2P07951 284 aa9.53□□□□□ -0.88
CDH1-203ENST00000561751 NCLP19338 710 aaKnown RBP9.53□□□□□ -0.88
CDH1-203ENST00000561751 IRX6P78412 446 aaPredicted RBP9.53□□□□□ -0.88
CDH1-203ENST00000561751 MAP7D2Q96T17 732 aa9.53□□□□□ -0.88
CDH1-203ENST00000561751 TERF1P54274 439 aa9.52□□□□□ -0.89
CDH1-203ENST00000561751 FAM69CQ0P6D2 419 aa9.52□□□□□ -0.89
CDH1-203ENST00000561751 PPP4R3BQ5MIZ7 849 aa9.52□□□□□ -0.89
CDH1-203ENST00000561751 CARMIL1Q5VZK9 1371 aa9.51□□□□□ -0.89
CDH1-203ENST00000561751 CNTLNQ9NXG0 1405 aa9.51□□□□□ -0.89
CDH1-203ENST00000561751 HRO43593 1189 aa9.51□□□□□ -0.89
CDH1-203ENST00000561751 AAMPQ13685 434 aa9.51□□□□□ -0.89
CDH1-203ENST00000561751 ISY1Q9ULR0 285 aaKnown RBP9.51□□□□□ -0.89
CDH1-203ENST00000561751 ADCY10Q96PN6 1610 aa9.51□□□□□ -0.89
CDH1-203ENST00000561751 LARP6Q9BRS8 491 aaKnown RBP9.5□□□□□ -0.89
CDH1-203ENST00000561751 PNNQ9H307 717 aaKnown RBP9.5□□□□□ -0.89
CDH1-203ENST00000561751 TK2O00142 265 aa9.49□□□□□ -0.89
CDH1-203ENST00000561751 MFSD10Q14728 455 aa9.49□□□□□ -0.89
CDH1-203ENST00000561751 CADPS2Q86UW7 1296 aa9.49□□□□□ -0.89
CDH1-203ENST00000561751 JPH4Q96JJ6 628 aa9.48□□□□□ -0.89
CDH1-203ENST00000561751 LAS1LQ9Y4W2 734 aaKnown RBP9.48□□□□□ -0.89
CDH1-203ENST00000561751 RBM10P98175 930 aaKnown RBP9.47□□□□□ -0.89
CDH1-203ENST00000561751 ZNF454Q8N9F8 522 aa9.47□□□□□ -0.89
CDH1-203ENST00000561751 DDX27Q96GQ7 796 aaKnown RBP9.47□□□□□ -0.89
CDH1-203ENST00000561751 KCNK17Q96T54 332 aa9.47□□□□□ -0.89
CDH1-203ENST00000561751 PRKRIP1Q9H875 184 aaPredicted RBP9.47□□□□□ -0.89
CDH1-203ENST00000561751 TONSLQ96HA7 1378 aa9.47□□□□□ -0.89
CDH1-203ENST00000561751 PDE4CQ08493 712 aa9.46□□□□□ -0.9
CDH1-203ENST00000561751 MTERF4Q7Z6M4 381 aaKnown RBP9.46□□□□□ -0.9
CDH1-203ENST00000561751 PRXQ9BXM0 1461 aa9.46□□□□□ -0.9
CDH1-203ENST00000561751 RAPGEF2Q9Y4G8 1499 aa9.46□□□□□ -0.9
CDH1-203ENST00000561751 FOSBP53539 338 aa9.45□□□□□ -0.9
CDH1-203ENST00000561751 KANK4Q5T7N3 995 aaPredicted RBP9.45□□□□□ -0.9
CDH1-203ENST00000561751 EMILIN3Q9NT22 766 aa9.45□□□□□ -0.9
CDH1-203ENST00000561751 EVI5O60447 810 aa9.44□□□□□ -0.9
CDH1-203ENST00000561751 PDE3BQ13370 1112 aa9.44□□□□□ -0.9
CDH1-203ENST00000561751 DCAF11Q8TEB1 546 aa9.44□□□□□ -0.9
CDH1-203ENST00000561751 RRAGDQ9NQL2 400 aaPredicted RBP9.44□□□□□ -0.9
CDH1-203ENST00000561751 PRDM4Q9UKN5 801 aa9.44□□□□□ -0.9
CDH1-203ENST00000561751 INSRP06213 1382 aa9.44□□□□□ -0.9
CDH1-203ENST00000561751 ADGRL1O94910 1474 aa9.44□□□□□ -0.9
CDH1-203ENST00000561751 TSPOAP1O95153 1857 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms