RNA–Protein interactions for RNA: ENST00000561437.1

PPP1R3E-209, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 2

Gene PPP1R3E, Length 690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-209ENST00000561437 USP47Q96K76 1375 aa23.76■■□□□ 1.39
PPP1R3E-209ENST00000561437 ERVK-7P63135 1459 aa23.75■■□□□ 1.39
PPP1R3E-209ENST00000561437 SYNMO15061 1565 aa23.75■■□□□ 1.39
PPP1R3E-209ENST00000561437 KIAA1210Q9ULL0 1709 aa23.75■■□□□ 1.39
PPP1R3E-209ENST00000561437 MROH2AA6NES4 1674 aa23.74■■□□□ 1.39
PPP1R3E-209ENST00000561437 SLC24A1O60721 1099 aa23.73■■□□□ 1.39
PPP1R3E-209ENST00000561437 UGGT1Q9NYU2 1555 aa23.73■■□□□ 1.39
PPP1R3E-209ENST00000561437 CHGAP10645 457 aaKnown RBP23.72■■□□□ 1.39
PPP1R3E-209ENST00000561437 IFT172Q9UG01 1749 aa23.71■■□□□ 1.39
PPP1R3E-209ENST00000561437 VGFO15240 615 aaPredicted RBP23.71■■□□□ 1.39
PPP1R3E-209ENST00000561437 ZMYM3Q14202 1370 aa23.7■■□□□ 1.38
PPP1R3E-209ENST00000561437 CEBPAP49715 358 aaPredicted RBP23.7■■□□□ 1.38
PPP1R3E-209ENST00000561437 CFAP65Q6ZU64 1925 aaKnown RBP23.7■■□□□ 1.38
PPP1R3E-209ENST00000561437 SETD1BQ9UPS6 1966 aaKnown RBP23.69■■□□□ 1.38
PPP1R3E-209ENST00000561437 IDI1Q13907 227 aa23.68■■□□□ 1.38
PPP1R3E-209ENST00000561437 NRXN1Q9ULB1 1477 aa23.68■■□□□ 1.38
PPP1R3E-209ENST00000561437 POLR1AO95602 1720 aaPredicted RBP23.67■■□□□ 1.38
PPP1R3E-209ENST00000561437 ZFYVE9O95405 1425 aa23.67■■□□□ 1.38
PPP1R3E-209ENST00000561437 PPLO60437 1756 aa23.65■■□□□ 1.38
PPP1R3E-209ENST00000561437 EIF3AQ14152 1382 aaKnown RBP23.65■■□□□ 1.38
PPP1R3E-209ENST00000561437 HIRIP3Q9BW71 556 aaPredicted RBP23.64■■□□□ 1.37
PPP1R3E-209ENST00000561437 STAG3Q9UJ98 1225 aa23.64■■□□□ 1.37
PPP1R3E-209ENST00000561437 HDGFP51858 240 aaKnown RBP23.63■■□□□ 1.37
PPP1R3E-209ENST00000561437 TMEM131LA2VDJ0 1609 aa23.62■■□□□ 1.37
PPP1R3E-209ENST00000561437 IQSEC2Q5JU85 1478 aa23.62■■□□□ 1.37
PPP1R3E-209ENST00000561437 DDX10Q13206 875 aaKnown RBP23.61■■□□□ 1.37
PPP1R3E-209ENST00000561437 CCDC7Q96M83 1385 aa23.61■■□□□ 1.37
PPP1R3E-209ENST00000561437 KDM5AP29375 1690 aaKnown RBP23.6■■□□□ 1.37
PPP1R3E-209ENST00000561437 FBXO31Q5XUX0 539 aaPredicted RBP23.6■■□□□ 1.37
PPP1R3E-209ENST00000561437 SETBP1Q9Y6X0 1596 aa23.6■■□□□ 1.37
PPP1R3E-209ENST00000561437 LTBP4Q8N2S1 1624 aa23.59■■□□□ 1.37
PPP1R3E-209ENST00000561437 SCAF11Q99590 1463 aaKnown RBP23.59■■□□□ 1.37
PPP1R3E-209ENST00000561437 NEXMIFQ5QGS0 1516 aa23.59■■□□□ 1.37
PPP1R3E-209ENST00000561437 TNRQ92752 1358 aa23.58■■□□□ 1.37
PPP1R3E-209ENST00000561437 NBPF1Q3BBV0 1214 aa23.58■■□□□ 1.37
PPP1R3E-209ENST00000561437 PIK3C2GO75747 1445 aa23.58■■□□□ 1.36
PPP1R3E-209ENST00000561437 WASHC2AQ641Q2 1341 aa23.58■■□□□ 1.36
PPP1R3E-209ENST00000561437 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.57■■□□□ 1.36
PPP1R3E-209ENST00000561437 NLRP1Q9C000 1473 aa23.56■■□□□ 1.36
PPP1R3E-209ENST00000561437 ST20-MTHFSA0A0A6YYL1 179 aa23.56■■□□□ 1.36
PPP1R3E-209ENST00000561437 ADGRF5Q8IZF2 1346 aa23.56■■□□□ 1.36
PPP1R3E-209ENST00000561437 C14orf93Q9H972 538 aaKnown RBP23.55■■□□□ 1.36
PPP1R3E-209ENST00000561437 CDCA8Q53HL2 280 aa23.54■■□□□ 1.36
PPP1R3E-209ENST00000561437 IQGAP1P46940 1657 aa23.54■■□□□ 1.36
PPP1R3E-209ENST00000561437 C3P01024 1663 aa23.53■■□□□ 1.36
PPP1R3E-209ENST00000561437 ANP32CO43423 234 aa23.52■■□□□ 1.36
PPP1R3E-209ENST00000561437 KIF7Q2M1P5 1343 aa23.52■■□□□ 1.36
PPP1R3E-209ENST00000561437 TMF1P82094 1093 aa23.51■■□□□ 1.35
PPP1R3E-209ENST00000561437 A2ML1A8K2U0 1454 aa23.5■■□□□ 1.35
PPP1R3E-209ENST00000561437 MIER1Q8N108 512 aa23.5■■□□□ 1.35
PPP1R3E-209ENST00000561437 CFAP70Q5T0N1 1121 aa23.49■■□□□ 1.35
PPP1R3E-209ENST00000561437 MYO5BQ9ULV0 1848 aa23.45■■□□□ 1.34
PPP1R3E-209ENST00000561437 RIMS2Q9UQ26 1411 aa23.44■■□□□ 1.34
PPP1R3E-209ENST00000561437 SBNO2Q9Y2G9 1366 aa23.43■■□□□ 1.34
PPP1R3E-209ENST00000561437 C11orf95C9JLR9 678 aaPredicted RBP23.43■■□□□ 1.34
PPP1R3E-209ENST00000561437 UBAP1LF5GYI3 381 aa23.43■■□□□ 1.34
PPP1R3E-209ENST00000561437 TESK2Q96S53 571 aa23.41■■□□□ 1.34
PPP1R3E-209ENST00000561437 MYO3AQ8NEV4 1616 aa23.41■■□□□ 1.34
PPP1R3E-209ENST00000561437 ADGRB1O14514 1584 aa23.4■■□□□ 1.34
PPP1R3E-209ENST00000561437 CCER2I3L3R5 266 aa23.39■■□□□ 1.33
PPP1R3E-209ENST00000561437 UBR1Q8IWV7 1749 aa23.39■■□□□ 1.33
PPP1R3E-209ENST00000561437 TMEM2Q9UHN6 1383 aa23.38■■□□□ 1.33
PPP1R3E-209ENST00000561437 THEMISQ8N1K5 641 aaPredicted RBP23.37■■□□□ 1.33
PPP1R3E-209ENST00000561437 CENPJQ9HC77 1338 aaPredicted RBP23.36■■□□□ 1.33
PPP1R3E-209ENST00000561437 EID1Q9Y6B2 187 aa23.36■■□□□ 1.33
PPP1R3E-209ENST00000561437 ZNF335Q9H4Z2 1342 aaPredicted RBP23.34■■□□□ 1.33
PPP1R3E-209ENST00000561437 PUS7Q96PZ0 661 aaKnown RBP23.34■■□□□ 1.33
PPP1R3E-209ENST00000561437 POLR3GLQ9BT43 218 aa23.34■■□□□ 1.33
PPP1R3E-209ENST00000561437 ALKQ9UM73 1620 aa23.33■■□□□ 1.32
PPP1R3E-209ENST00000561437 KTN1Q86UP2 1357 aaKnown RBP23.32■■□□□ 1.32
PPP1R3E-209ENST00000561437 SLIT1O75093 1534 aa23.3■■□□□ 1.32
PPP1R3E-209ENST00000561437 NUTM2DQ5VT03 806 aaPredicted RBP23.3■■□□□ 1.32
PPP1R3E-209ENST00000561437 NCKAP5LQ9HCH0 1330 aa23.3■■□□□ 1.32
PPP1R3E-209ENST00000561437 MED1Q15648 1581 aaPredicted RBP23.29■■□□□ 1.32
PPP1R3E-209ENST00000561437 TRAK1Q9UPV9 953 aa23.29■■□□□ 1.32
PPP1R3E-209ENST00000561437 PLEKHG1Q9ULL1 1385 aa23.27■■□□□ 1.32
PPP1R3E-209ENST00000561437 YTHDC2Q9H6S0 1430 aaKnown RBP23.27■■□□□ 1.32
PPP1R3E-209ENST00000561437 TMEM132EQ6IEE7 984 aa23.27■■□□□ 1.32
PPP1R3E-209ENST00000561437 ARHGAP23Q9P227 1491 aa23.27■■□□□ 1.32
PPP1R3E-209ENST00000561437 DLC1Q96QB1 1528 aa23.27■■□□□ 1.32
PPP1R3E-209ENST00000561437 SIRT1Q96EB6 747 aa23.25■■□□□ 1.31
PPP1R3E-209ENST00000561437 LRPPRCP42704 1394 aaKnown RBP23.25■■□□□ 1.31
PPP1R3E-209ENST00000561437 QRICH2Q9H0J4 1663 aa23.24■■□□□ 1.31
PPP1R3E-209ENST00000561437 EVC2Q86UK5 1308 aa23.24■■□□□ 1.31
PPP1R3E-209ENST00000561437 ARHGEF28Q8N1W1 1705 aaKnown RBP23.24■■□□□ 1.31
PPP1R3E-209ENST00000561437 CEP170BQ9Y4F5 1589 aaPredicted RBP23.23■■□□□ 1.31
PPP1R3E-209ENST00000561437 TXNDC2Q86VQ3 553 aa23.23■■□□□ 1.31
PPP1R3E-209ENST00000561437 SCAF1Q9H7N4 1312 aaKnown RBP23.23■■□□□ 1.31
PPP1R3E-209ENST00000561437 ABCC11Q96J66 1382 aa23.23■■□□□ 1.31
PPP1R3E-209ENST00000561437 CENPBP07199 599 aaPredicted RBP23.22■■□□□ 1.31
PPP1R3E-209ENST00000561437 PRKRIP1Q9H875 184 aaPredicted RBP23.22■■□□□ 1.31
PPP1R3E-209ENST00000561437 ZNF142P52746 1687 aaPredicted RBP23.22■■□□□ 1.31
PPP1R3E-209ENST00000561437 HSPA1LP34931 641 aa23.21■■□□□ 1.31
PPP1R3E-209ENST00000561437 BCANQ96GW7 911 aa23.21■■□□□ 1.31
PPP1R3E-209ENST00000561437 ASXL1Q8IXJ9 1541 aa23.21■■□□□ 1.31
PPP1R3E-209ENST00000561437 DIP2AQ14689 1571 aa23.2■■□□□ 1.3
PPP1R3E-209ENST00000561437 POGKQ9P215 609 aa23.2■■□□□ 1.3
PPP1R3E-209ENST00000561437 RALBP1Q15311 655 aa23.19■■□□□ 1.3
PPP1R3E-209ENST00000561437 SETD1AO15047 1707 aaKnown RBP23.19■■□□□ 1.3
PPP1R3E-209ENST00000561437 NINLQ9Y2I6 1382 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms