RNA–Protein interactions for RNA: ENST00000561278.1

SHF-211, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-211ENST00000561278 RRBP1Q9P2E9 1410 aaKnown RBP19.01■□□□□ 0.63
SHF-211ENST00000561278 PPP1R15AO75807 674 aaPredicted RBP19.01■□□□□ 0.63
SHF-211ENST00000561278 SLC26A8Q96RN1 970 aa19■□□□□ 0.63
SHF-211ENST00000561278 MYO5BQ9ULV0 1848 aa19■□□□□ 0.63
SHF-211ENST00000561278 TMEM131LA2VDJ0 1609 aa19■□□□□ 0.63
SHF-211ENST00000561278 HSPA1LP34931 641 aa18.99■□□□□ 0.63
SHF-211ENST00000561278 ALKQ9UM73 1620 aa18.99■□□□□ 0.63
SHF-211ENST00000561278 RIMS2Q9UQ26 1411 aa18.99■□□□□ 0.63
SHF-211ENST00000561278 ZFYVE9O95405 1425 aa18.97■□□□□ 0.63
SHF-211ENST00000561278 HDGFP51858 240 aaKnown RBP18.95■□□□□ 0.62
SHF-211ENST00000561278 PLEKHG1Q9ULL1 1385 aa18.94■□□□□ 0.62
SHF-211ENST00000561278 XIRP1Q702N8 1843 aaKnown RBP18.93■□□□□ 0.62
SHF-211ENST00000561278 KCNA6P17658 529 aa18.93■□□□□ 0.62
SHF-211ENST00000561278 NUTM2DQ5VT03 806 aaPredicted RBP18.93■□□□□ 0.62
SHF-211ENST00000561278 TMEM94Q12767 1356 aa18.93■□□□□ 0.62
SHF-211ENST00000561278 SPHKAPQ2M3C7 1700 aa18.92■□□□□ 0.62
SHF-211ENST00000561278 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.92■□□□□ 0.62
SHF-211ENST00000561278 NWD1Q149M9 1564 aa18.92■□□□□ 0.62
SHF-211ENST00000561278 NAIPQ13075 1403 aa18.91■□□□□ 0.62
SHF-211ENST00000561278 NKTRP30414 1462 aaKnown RBP18.91■□□□□ 0.62
SHF-211ENST00000561278 PROSER2Q86WR7 435 aaPredicted RBP18.91■□□□□ 0.62
SHF-211ENST00000561278 ILDR2Q71H61 639 aa18.9■□□□□ 0.62
SHF-211ENST00000561278 RBM33Q96EV2 1170 aaKnown RBP18.9■□□□□ 0.62
SHF-211ENST00000561278 MED1Q15648 1581 aaPredicted RBP18.88■□□□□ 0.61
SHF-211ENST00000561278 HFM1A2PYH4 1435 aa18.86■□□□□ 0.61
SHF-211ENST00000561278 ZNF326Q5BKZ1 582 aaKnown RBP18.86■□□□□ 0.61
SHF-211ENST00000561278 TRIM52Q96A61 297 aa18.86■□□□□ 0.61
SHF-211ENST00000561278 DIP2AQ14689 1571 aa18.85■□□□□ 0.61
SHF-211ENST00000561278 MSH6P52701 1360 aa18.84■□□□□ 0.61
SHF-211ENST00000561278 CLTCL1P53675 1640 aa18.83■□□□□ 0.61
SHF-211ENST00000561278 TRPM2O94759 1503 aa18.83■□□□□ 0.6
SHF-211ENST00000561278 CHD2O14647 1828 aaKnown RBP18.83■□□□□ 0.6
SHF-211ENST00000561278 ADAMTS13Q76LX8 1427 aa18.83■□□□□ 0.6
SHF-211ENST00000561278 TBX22Q9Y458 520 aa18.82■□□□□ 0.6
SHF-211ENST00000561278 C14orf37Q86TY3 774 aa18.81■□□□□ 0.6
SHF-211ENST00000561278 ROBO1Q9Y6N7 1651 aa18.8■□□□□ 0.6
SHF-211ENST00000561278 FAM135BQ49AJ0 1406 aa18.78■□□□□ 0.6
SHF-211ENST00000561278 SLC4A1APQ9BWU0 796 aaKnown RBP18.78■□□□□ 0.6
SHF-211ENST00000561278 PIAS4Q8N2W9 510 aaPredicted RBP18.77■□□□□ 0.6
SHF-211ENST00000561278 PIK3R4Q99570 1358 aa18.77■□□□□ 0.6
SHF-211ENST00000561278 KIF1BO60333 1816 aa18.76■□□□□ 0.59
SHF-211ENST00000561278 SETBP1Q9Y6X0 1596 aa18.76■□□□□ 0.59
SHF-211ENST00000561278 NEXMIFQ5QGS0 1516 aa18.75■□□□□ 0.59
SHF-211ENST00000561278 NRXN3Q9Y4C0 1643 aa18.75■□□□□ 0.59
SHF-211ENST00000561278 SOCS7O14512 581 aa18.75■□□□□ 0.59
SHF-211ENST00000561278 AMOTL2Q9Y2J4 779 aa18.74■□□□□ 0.59
SHF-211ENST00000561278 SLAIN2Q9P270 581 aa18.73■□□□□ 0.59
SHF-211ENST00000561278 PTPRUQ92729 1446 aa18.73■□□□□ 0.59
SHF-211ENST00000561278 NCOA3Q9Y6Q9 1424 aa18.73■□□□□ 0.59
SHF-211ENST00000561278 XRN1Q8IZH2 1706 aaKnown RBP18.7■□□□□ 0.58
SHF-211ENST00000561278 PHLPP1O60346 1717 aa18.69■□□□□ 0.58
SHF-211ENST00000561278 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.69■□□□□ 0.58
SHF-211ENST00000561278 ATF3P18847 181 aa18.69■□□□□ 0.58
SHF-211ENST00000561278 METP08581 1390 aa18.68■□□□□ 0.58
SHF-211ENST00000561278 CADPS2Q86UW7 1296 aa18.68■□□□□ 0.58
SHF-211ENST00000561278 C19orf44Q9H6X5 657 aa18.67■□□□□ 0.58
SHF-211ENST00000561278 CCDC144AA2RUR9 1427 aa18.66■□□□□ 0.58
SHF-211ENST00000561278 VGFO15240 615 aaPredicted RBP18.65■□□□□ 0.58
SHF-211ENST00000561278 DCCP43146 1447 aa18.63■□□□□ 0.57
SHF-211ENST00000561278 RPGRIP1LQ68CZ1 1315 aa18.62■□□□□ 0.57
SHF-211ENST00000561278 PPLO60437 1756 aa18.62■□□□□ 0.57
SHF-211ENST00000561278 COL16A1Q07092 1604 aaPredicted RBP18.61■□□□□ 0.57
SHF-211ENST00000561278 MPHOSPH9Q99550 1183 aa18.61■□□□□ 0.57
SHF-211ENST00000561278 JCADQ9P266 1359 aa18.6■□□□□ 0.57
SHF-211ENST00000561278 SETD5Q9C0A6 1442 aa18.59■□□□□ 0.57
SHF-211ENST00000561278 ADGRL3Q9HAR2 1447 aa18.59■□□□□ 0.57
SHF-211ENST00000561278 SETD1AO15047 1707 aaKnown RBP18.59■□□□□ 0.57
SHF-211ENST00000561278 NALCNQ8IZF0 1738 aa18.59■□□□□ 0.57
SHF-211ENST00000561278 AHDC1Q5TGY3 1603 aaPredicted RBP18.59■□□□□ 0.57
SHF-211ENST00000561278 RGL3Q3MIN7 710 aa18.58■□□□□ 0.56
SHF-211ENST00000561278 BRINP3Q76B58 766 aa18.57■□□□□ 0.56
SHF-211ENST00000561278 ASXL1Q8IXJ9 1541 aa18.57■□□□□ 0.56
SHF-211ENST00000561278 MST1RQ04912 1400 aa18.57■□□□□ 0.56
SHF-211ENST00000561278 PTCH1Q13635 1447 aa18.57■□□□□ 0.56
SHF-211ENST00000561278 ACIN1Q9UKV3 1341 aaKnown RBP18.54■□□□□ 0.56
SHF-211ENST00000561278 RGS17Q9UGC6 210 aaPredicted RBP18.54■□□□□ 0.56
SHF-211ENST00000561278 SPATA31E1Q6ZUB1 1445 aa18.54■□□□□ 0.56
SHF-211ENST00000561278 RAB3GAP2Q9H2M9 1393 aa18.54■□□□□ 0.56
SHF-211ENST00000561278 ROBO2Q9HCK4 1378 aa18.54■□□□□ 0.56
SHF-211ENST00000561278 ADGRF5Q8IZF2 1346 aa18.52■□□□□ 0.56
SHF-211ENST00000561278 MEX3CQ5U5Q3 659 aaKnown RBP18.52■□□□□ 0.56
SHF-211ENST00000561278 ANKRD30BQ9BXX2 1392 aa18.52■□□□□ 0.55
SHF-211ENST00000561278 IFT172Q9UG01 1749 aa18.52■□□□□ 0.55
SHF-211ENST00000561278 SHPRHQ149N8 1683 aa18.5■□□□□ 0.55
SHF-211ENST00000561278 SPATA31A6Q5VVP1 1343 aa18.5■□□□□ 0.55
SHF-211ENST00000561278 LRP6O75581 1613 aa18.49■□□□□ 0.55
SHF-211ENST00000561278 NHSL1Q5SYE7 1610 aa18.49■□□□□ 0.55
SHF-211ENST00000561278 PRAG1Q86YV5 1406 aa18.49■□□□□ 0.55
SHF-211ENST00000561278 C1orf167Q5SNV9 1468 aa18.47■□□□□ 0.55
SHF-211ENST00000561278 STK26Q9P289 416 aa18.47■□□□□ 0.55
SHF-211ENST00000561278 PIK3C2GO75747 1445 aa18.47■□□□□ 0.55
SHF-211ENST00000561278 NUTM2BA6NNL0 878 aaPredicted RBP18.46■□□□□ 0.55
SHF-211ENST00000561278 NUTM2EB1AL46 878 aaPredicted RBP18.46■□□□□ 0.55
SHF-211ENST00000561278 POTEAQ6S8J7 498 aa18.46■□□□□ 0.55
SHF-211ENST00000561278 NUTM2AQ8IVF1 878 aaPredicted RBP18.46■□□□□ 0.55
SHF-211ENST00000561278 DDX17Q92841 729 aaKnown RBP18.46■□□□□ 0.55
SHF-211ENST00000561278 TMEM132EQ6IEE7 984 aa18.43■□□□□ 0.54
SHF-211ENST00000561278 LRRC59Q96AG4 307 aaKnown RBP18.43■□□□□ 0.54
SHF-211ENST00000561278 LRPPRCP42704 1394 aaKnown RBP18.42■□□□□ 0.54
SHF-211ENST00000561278 CDC42BPGQ6DT37 1551 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms