RNA–Protein interactions for RNA: ENST00000560999.1

CSHL1-209, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

Gene CSHL1, Length 1,602 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-209ENST00000560999 PIP4K2BP78356 416 aa19.22■□□□□ 0.67
CSHL1-209ENST00000560999 NOS1P29475 1434 aa19.21■□□□□ 0.67
CSHL1-209ENST00000560999 IDI1Q13907 227 aa19.21■□□□□ 0.67
CSHL1-209ENST00000560999 TXNDC2Q86VQ3 553 aa19.21■□□□□ 0.67
CSHL1-209ENST00000560999 E9PCH4 1651 aa19.2■□□□□ 0.66
CSHL1-209ENST00000560999 FOXD1Q16676 465 aa19.2■□□□□ 0.66
CSHL1-209ENST00000560999 ADGRB3O60242 1522 aa19.19■□□□□ 0.66
CSHL1-209ENST00000560999 LRRC7Q96NW7 1537 aa19.19■□□□□ 0.66
CSHL1-209ENST00000560999 TMEM2Q9UHN6 1383 aa19.19■□□□□ 0.66
CSHL1-209ENST00000560999 STAG3Q9UJ98 1225 aa19.19■□□□□ 0.66
CSHL1-209ENST00000560999 SIN3AQ96ST3 1273 aa19.18■□□□□ 0.66
CSHL1-209ENST00000560999 KDM5AP29375 1690 aaKnown RBP19.18■□□□□ 0.66
CSHL1-209ENST00000560999 MYO5BQ9ULV0 1848 aa19.17■□□□□ 0.66
CSHL1-209ENST00000560999 SENP3Q9H4L4 574 aaPredicted RBP19.17■□□□□ 0.66
CSHL1-209ENST00000560999 ILDR2Q71H61 639 aa19.15■□□□□ 0.66
CSHL1-209ENST00000560999 RPRD2Q5VT52 1461 aaKnown RBP19.15■□□□□ 0.66
CSHL1-209ENST00000560999 NEUROD1Q13562 356 aa19.14■□□□□ 0.66
CSHL1-209ENST00000560999 EID1Q9Y6B2 187 aa19.14■□□□□ 0.66
CSHL1-209ENST00000560999 XIRP1Q702N8 1843 aaKnown RBP19.14■□□□□ 0.65
CSHL1-209ENST00000560999 SPHKAPQ2M3C7 1700 aa19.14■□□□□ 0.65
CSHL1-209ENST00000560999 HSPA1LP34931 641 aa19.14■□□□□ 0.65
CSHL1-209ENST00000560999 TOM1O60784 492 aa19.13■□□□□ 0.65
CSHL1-209ENST00000560999 TRPM2O94759 1503 aa19.1■□□□□ 0.65
CSHL1-209ENST00000560999 SLC26A8Q96RN1 970 aa19.1■□□□□ 0.65
CSHL1-209ENST00000560999 TMEM131LA2VDJ0 1609 aa19.1■□□□□ 0.65
CSHL1-209ENST00000560999 TONSLQ96HA7 1378 aa19.09■□□□□ 0.65
CSHL1-209ENST00000560999 CCDC144AA2RUR9 1427 aa19.07■□□□□ 0.64
CSHL1-209ENST00000560999 SLC52A1Q9NWF4 448 aa19.07■□□□□ 0.64
CSHL1-209ENST00000560999 ZFYVE9O95405 1425 aa19.07■□□□□ 0.64
CSHL1-209ENST00000560999 RBM33Q96EV2 1170 aaKnown RBP19.06■□□□□ 0.64
CSHL1-209ENST00000560999 CHGAP10645 457 aaKnown RBP19.05■□□□□ 0.64
CSHL1-209ENST00000560999 RIMS2Q9UQ26 1411 aa19.05■□□□□ 0.64
CSHL1-209ENST00000560999 MED1Q15648 1581 aaPredicted RBP19.04■□□□□ 0.64
CSHL1-209ENST00000560999 NUTM2DQ5VT03 806 aaPredicted RBP19.03■□□□□ 0.64
CSHL1-209ENST00000560999 BCANQ96GW7 911 aa19.03■□□□□ 0.64
CSHL1-209ENST00000560999 NWD1Q149M9 1564 aa19.02■□□□□ 0.64
CSHL1-209ENST00000560999 CLTCL1P53675 1640 aa19.02■□□□□ 0.64
CSHL1-209ENST00000560999 TMEM94Q12767 1356 aa19.02■□□□□ 0.64
CSHL1-209ENST00000560999 PPP1R15AO75807 674 aaPredicted RBP19■□□□□ 0.63
CSHL1-209ENST00000560999 PLEKHG1Q9ULL1 1385 aa18.99■□□□□ 0.63
CSHL1-209ENST00000560999 KCNA6P17658 529 aa18.99■□□□□ 0.63
CSHL1-209ENST00000560999 L3MBTL2Q969R5 705 aa18.98■□□□□ 0.63
CSHL1-209ENST00000560999 KIF1BO60333 1816 aa18.97■□□□□ 0.63
CSHL1-209ENST00000560999 PROSER2Q86WR7 435 aaPredicted RBP18.96■□□□□ 0.63
CSHL1-209ENST00000560999 NKTRP30414 1462 aaKnown RBP18.96■□□□□ 0.63
CSHL1-209ENST00000560999 CHD2O14647 1828 aaKnown RBP18.96■□□□□ 0.63
CSHL1-209ENST00000560999 SPATA31E1Q6ZUB1 1445 aa18.95■□□□□ 0.62
CSHL1-209ENST00000560999 ADAMTS13Q76LX8 1427 aa18.94■□□□□ 0.62
CSHL1-209ENST00000560999 ROBO1Q9Y6N7 1651 aa18.93■□□□□ 0.62
CSHL1-209ENST00000560999 SOCS7O14512 581 aa18.9■□□□□ 0.62
CSHL1-209ENST00000560999 NRXN3Q9Y4C0 1643 aa18.9■□□□□ 0.62
CSHL1-209ENST00000560999 CENPBP07199 599 aaPredicted RBP18.89■□□□□ 0.62
CSHL1-209ENST00000560999 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.89■□□□□ 0.62
CSHL1-209ENST00000560999 DIP2AQ14689 1571 aa18.89■□□□□ 0.61
CSHL1-209ENST00000560999 HDGFP51858 240 aaKnown RBP18.88■□□□□ 0.61
CSHL1-209ENST00000560999 TBX22Q9Y458 520 aa18.87■□□□□ 0.61
CSHL1-209ENST00000560999 MSH6P52701 1360 aa18.87■□□□□ 0.61
CSHL1-209ENST00000560999 FAM135BQ49AJ0 1406 aa18.86■□□□□ 0.61
CSHL1-209ENST00000560999 PTPRUQ92729 1446 aa18.86■□□□□ 0.61
CSHL1-209ENST00000560999 IFT172Q9UG01 1749 aa18.86■□□□□ 0.61
CSHL1-209ENST00000560999 RGL3Q3MIN7 710 aa18.85■□□□□ 0.61
CSHL1-209ENST00000560999 STAC3Q96MF2 364 aa18.85■□□□□ 0.61
CSHL1-209ENST00000560999 ZNF326Q5BKZ1 582 aaKnown RBP18.85■□□□□ 0.61
CSHL1-209ENST00000560999 DCAF11Q8TEB1 546 aa18.85■□□□□ 0.61
CSHL1-209ENST00000560999 NEXMIFQ5QGS0 1516 aa18.84■□□□□ 0.61
CSHL1-209ENST00000560999 SETBP1Q9Y6X0 1596 aa18.83■□□□□ 0.61
CSHL1-209ENST00000560999 PHF23Q9BUL5 403 aaPredicted RBP18.83■□□□□ 0.61
CSHL1-209ENST00000560999 XRN1Q8IZH2 1706 aaKnown RBP18.82■□□□□ 0.6
CSHL1-209ENST00000560999 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.82■□□□□ 0.6
CSHL1-209ENST00000560999 NBPF8Q3BBV2 869 aa18.82■□□□□ 0.6
CSHL1-209ENST00000560999 PPLO60437 1756 aa18.81■□□□□ 0.6
CSHL1-209ENST00000560999 PHLPP1O60346 1717 aa18.81■□□□□ 0.6
CSHL1-209ENST00000560999 C14orf37Q86TY3 774 aa18.81■□□□□ 0.6
CSHL1-209ENST00000560999 PRAG1Q86YV5 1406 aa18.81■□□□□ 0.6
CSHL1-209ENST00000560999 MYOM2P54296 1465 aa18.8■□□□□ 0.6
CSHL1-209ENST00000560999 RPGRIP1LQ68CZ1 1315 aa18.8■□□□□ 0.6
CSHL1-209ENST00000560999 KDM2AQ9Y2K7 1162 aa18.8■□□□□ 0.6
CSHL1-209ENST00000560999 SLAIN2Q9P270 581 aa18.79■□□□□ 0.6
CSHL1-209ENST00000560999 AMOTL2Q9Y2J4 779 aa18.79■□□□□ 0.6
CSHL1-209ENST00000560999 METP08581 1390 aa18.79■□□□□ 0.6
CSHL1-209ENST00000560999 PIK3R4Q99570 1358 aa18.79■□□□□ 0.6
CSHL1-209ENST00000560999 TRPM1Q7Z4N2 1603 aa18.78■□□□□ 0.6
CSHL1-209ENST00000560999 RALGAPBQ86X10 1494 aa18.78■□□□□ 0.6
CSHL1-209ENST00000560999 MIER1Q8N108 512 aa18.75■□□□□ 0.59
CSHL1-209ENST00000560999 COL16A1Q07092 1604 aaPredicted RBP18.75■□□□□ 0.59
CSHL1-209ENST00000560999 NRXN1Q9ULB1 1477 aa18.75■□□□□ 0.59
CSHL1-209ENST00000560999 KIAA1210Q9ULL0 1709 aa18.74■□□□□ 0.59
CSHL1-209ENST00000560999 SETD1AO15047 1707 aaKnown RBP18.74■□□□□ 0.59
CSHL1-209ENST00000560999 NCOA3Q9Y6Q9 1424 aa18.74■□□□□ 0.59
CSHL1-209ENST00000560999 RGS17Q9UGC6 210 aaPredicted RBP18.74■□□□□ 0.59
CSHL1-209ENST00000560999 NALCNQ8IZF0 1738 aa18.72■□□□□ 0.59
CSHL1-209ENST00000560999 LAMC1P11047 1609 aa18.71■□□□□ 0.59
CSHL1-209ENST00000560999 C19orf44Q9H6X5 657 aa18.71■□□□□ 0.59
CSHL1-209ENST00000560999 ATF3P18847 181 aa18.71■□□□□ 0.58
CSHL1-209ENST00000560999 CADPS2Q86UW7 1296 aa18.69■□□□□ 0.58
CSHL1-209ENST00000560999 AHDC1Q5TGY3 1603 aaPredicted RBP18.68■□□□□ 0.58
CSHL1-209ENST00000560999 GPRASP1Q5JY77 1395 aa18.68■□□□□ 0.58
CSHL1-209ENST00000560999 VGFO15240 615 aaPredicted RBP18.68■□□□□ 0.58
CSHL1-209ENST00000560999 ADGRF5Q8IZF2 1346 aa18.68■□□□□ 0.58
CSHL1-209ENST00000560999 ROCK2O75116 1388 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms