RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 TXNDC2Q86VQ3 553 aa17.65■□□□□ 0.42
IRF9-211ENST00000560852 SCAF11Q99590 1463 aaKnown RBP17.64■□□□□ 0.41
IRF9-211ENST00000560852 VGFO15240 615 aaPredicted RBP17.64■□□□□ 0.41
IRF9-211ENST00000560852 TIMELESSQ9UNS1 1208 aa17.64■□□□□ 0.41
IRF9-211ENST00000560852 PLEKHG1Q9ULL1 1385 aa17.63■□□□□ 0.41
IRF9-211ENST00000560852 NEXMIFQ5QGS0 1516 aa17.62■□□□□ 0.41
IRF9-211ENST00000560852 CHGAP10645 457 aaKnown RBP17.62■□□□□ 0.41
IRF9-211ENST00000560852 KIF1BO60333 1816 aa17.62■□□□□ 0.41
IRF9-211ENST00000560852 SIN3AQ96ST3 1273 aa17.6■□□□□ 0.41
IRF9-211ENST00000560852 NCKAP5LQ9HCH0 1330 aa17.6■□□□□ 0.41
IRF9-211ENST00000560852 NRXN1Q9ULB1 1477 aa17.6■□□□□ 0.41
IRF9-211ENST00000560852 STRCQ7RTU9 1775 aa17.6■□□□□ 0.41
IRF9-211ENST00000560852 NPHP4O75161 1426 aaPredicted RBP17.59■□□□□ 0.41
IRF9-211ENST00000560852 ZNF326Q5BKZ1 582 aaKnown RBP17.59■□□□□ 0.41
IRF9-211ENST00000560852 TBX22Q9Y458 520 aa17.59■□□□□ 0.41
IRF9-211ENST00000560852 MYOM2P54296 1465 aa17.58■□□□□ 0.41
IRF9-211ENST00000560852 RGL3Q3MIN7 710 aa17.57■□□□□ 0.4
IRF9-211ENST00000560852 SETBP1Q9Y6X0 1596 aa17.55■□□□□ 0.4
IRF9-211ENST00000560852 PIK3R4Q99570 1358 aa17.54■□□□□ 0.4
IRF9-211ENST00000560852 MYO5BQ9ULV0 1848 aa17.54■□□□□ 0.4
IRF9-211ENST00000560852 CCER1Q8TC90 406 aaPredicted RBP17.54■□□□□ 0.4
IRF9-211ENST00000560852 L3MBTL2Q969R5 705 aa17.54■□□□□ 0.4
IRF9-211ENST00000560852 ADAMTS13Q76LX8 1427 aa17.54■□□□□ 0.4
IRF9-211ENST00000560852 ADGRF5Q8IZF2 1346 aa17.53■□□□□ 0.4
IRF9-211ENST00000560852 PIK3C2GO75747 1445 aa17.53■□□□□ 0.4
IRF9-211ENST00000560852 POLR1AO95602 1720 aaPredicted RBP17.52■□□□□ 0.4
IRF9-211ENST00000560852 IFT172Q9UG01 1749 aa17.52■□□□□ 0.4
IRF9-211ENST00000560852 PPP1R15AO75807 674 aaPredicted RBP17.52■□□□□ 0.4
IRF9-211ENST00000560852 DCAF11Q8TEB1 546 aa17.52■□□□□ 0.4
IRF9-211ENST00000560852 C14orf93Q9H972 538 aaKnown RBP17.52■□□□□ 0.4
IRF9-211ENST00000560852 PPLO60437 1756 aa17.52■□□□□ 0.4
IRF9-211ENST00000560852 DIP2AQ14689 1571 aa17.5■□□□□ 0.39
IRF9-211ENST00000560852 NEUROD1Q13562 356 aa17.5■□□□□ 0.39
IRF9-211ENST00000560852 PRAG1Q86YV5 1406 aa17.49■□□□□ 0.39
IRF9-211ENST00000560852 IQGAP1P46940 1657 aa17.48■□□□□ 0.39
IRF9-211ENST00000560852 NRXN3Q9Y4C0 1643 aa17.47■□□□□ 0.39
IRF9-211ENST00000560852 NUTM2DQ5VT03 806 aaPredicted RBP17.47■□□□□ 0.39
IRF9-211ENST00000560852 TONSLQ96HA7 1378 aa17.46■□□□□ 0.39
IRF9-211ENST00000560852 KCNA6P17658 529 aa17.46■□□□□ 0.39
IRF9-211ENST00000560852 SLC26A8Q96RN1 970 aa17.45■□□□□ 0.38
IRF9-211ENST00000560852 ALKQ9UM73 1620 aa17.44■□□□□ 0.38
IRF9-211ENST00000560852 SIRT1Q96EB6 747 aa17.44■□□□□ 0.38
IRF9-211ENST00000560852 KDM2AQ9Y2K7 1162 aa17.43■□□□□ 0.38
IRF9-211ENST00000560852 METP08581 1390 aa17.42■□□□□ 0.38
IRF9-211ENST00000560852 CFAP70Q5T0N1 1121 aa17.41■□□□□ 0.38
IRF9-211ENST00000560852 ABCC11Q96J66 1382 aa17.4■□□□□ 0.38
IRF9-211ENST00000560852 TECPR2O15040 1411 aa17.4■□□□□ 0.38
IRF9-211ENST00000560852 LAMC1P11047 1609 aa17.39■□□□□ 0.38
IRF9-211ENST00000560852 NCOA3Q9Y6Q9 1424 aa17.39■□□□□ 0.38
IRF9-211ENST00000560852 SETD1AO15047 1707 aaKnown RBP17.39■□□□□ 0.37
IRF9-211ENST00000560852 BCANQ96GW7 911 aa17.39■□□□□ 0.37
IRF9-211ENST00000560852 ADGRB1O14514 1584 aa17.39■□□□□ 0.37
IRF9-211ENST00000560852 NWD1Q149M9 1564 aa17.39■□□□□ 0.37
IRF9-211ENST00000560852 LTBP4Q8N2S1 1624 aa17.39■□□□□ 0.37
IRF9-211ENST00000560852 LRPPRCP42704 1394 aaKnown RBP17.39■□□□□ 0.37
IRF9-211ENST00000560852 GPRASP1Q5JY77 1395 aa17.39■□□□□ 0.37
IRF9-211ENST00000560852 PTPRUQ92729 1446 aa17.38■□□□□ 0.37
IRF9-211ENST00000560852 KIAA1210Q9ULL0 1709 aa17.38■□□□□ 0.37
IRF9-211ENST00000560852 NBPF8Q3BBV2 869 aa17.38■□□□□ 0.37
IRF9-211ENST00000560852 NKTRP30414 1462 aaKnown RBP17.37■□□□□ 0.37
IRF9-211ENST00000560852 CPS1P31327 1500 aa17.37■□□□□ 0.37
IRF9-211ENST00000560852 AMOTL2Q9Y2J4 779 aa17.37■□□□□ 0.37
IRF9-211ENST00000560852 ZNF335Q9H4Z2 1342 aaPredicted RBP17.37■□□□□ 0.37
IRF9-211ENST00000560852 PTCH1Q13635 1447 aa17.35■□□□□ 0.37
IRF9-211ENST00000560852 ASXL1Q8IXJ9 1541 aa17.35■□□□□ 0.37
IRF9-211ENST00000560852 CHD2O14647 1828 aaKnown RBP17.35■□□□□ 0.37
IRF9-211ENST00000560852 FAM135BQ49AJ0 1406 aa17.34■□□□□ 0.37
IRF9-211ENST00000560852 IQSEC2Q5JU85 1478 aa17.34■□□□□ 0.37
IRF9-211ENST00000560852 YTHDC2Q9H6S0 1430 aaKnown RBP17.34■□□□□ 0.37
IRF9-211ENST00000560852 XRN1Q8IZH2 1706 aaKnown RBP17.33■□□□□ 0.36
IRF9-211ENST00000560852 RALGAPBQ86X10 1494 aa17.32■□□□□ 0.36
IRF9-211ENST00000560852 NBPF1Q3BBV0 1214 aa17.32■□□□□ 0.36
IRF9-211ENST00000560852 TMEM132EQ6IEE7 984 aa17.32■□□□□ 0.36
IRF9-211ENST00000560852 DLC1Q96QB1 1528 aa17.31■□□□□ 0.36
IRF9-211ENST00000560852 LRRC7Q96NW7 1537 aa17.31■□□□□ 0.36
IRF9-211ENST00000560852 TRPM1Q7Z4N2 1603 aa17.29■□□□□ 0.36
IRF9-211ENST00000560852 ROBO2Q9HCK4 1378 aa17.28■□□□□ 0.36
IRF9-211ENST00000560852 STRCP1A6NGW2 1772 aa17.28■□□□□ 0.36
IRF9-211ENST00000560852 PROSER2Q86WR7 435 aaPredicted RBP17.27■□□□□ 0.36
IRF9-211ENST00000560852 CERKQ8TCT0 537 aa17.26■□□□□ 0.35
IRF9-211ENST00000560852 KNDC1Q76NI1 1749 aa17.26■□□□□ 0.35
IRF9-211ENST00000560852 ROCK2O75116 1388 aaKnown RBP17.26■□□□□ 0.35
IRF9-211ENST00000560852 TMEM94Q12767 1356 aa17.26■□□□□ 0.35
IRF9-211ENST00000560852 SENP3Q9H4L4 574 aaPredicted RBP17.25■□□□□ 0.35
IRF9-211ENST00000560852 C19orf44Q9H6X5 657 aa17.24■□□□□ 0.35
IRF9-211ENST00000560852 DCCP43146 1447 aa17.22■□□□□ 0.35
IRF9-211ENST00000560852 ZEB1P37275 1124 aaPredicted RBP17.22■□□□□ 0.35
IRF9-211ENST00000560852 CARD11Q9BXL7 1154 aa17.22■□□□□ 0.35
IRF9-211ENST00000560852 STK26Q9P289 416 aa17.22■□□□□ 0.35
IRF9-211ENST00000560852 SBNO2Q9Y2G9 1366 aa17.21■□□□□ 0.35
IRF9-211ENST00000560852 SLC24A1O60721 1099 aa17.21■□□□□ 0.35
IRF9-211ENST00000560852 TRAK1Q9UPV9 953 aa17.21■□□□□ 0.35
IRF9-211ENST00000560852 WAPLQ7Z5K2 1190 aa17.2■□□□□ 0.34
IRF9-211ENST00000560852 PRAM1Q96QH2 718 aa17.2■□□□□ 0.34
IRF9-211ENST00000560852 ADGRL3Q9HAR2 1447 aa17.2■□□□□ 0.34
IRF9-211ENST00000560852 PLEKHH1Q9ULM0 1364 aa17.18■□□□□ 0.34
IRF9-211ENST00000560852 EIF3AQ14152 1382 aaKnown RBP17.17■□□□□ 0.34
IRF9-211ENST00000560852 CADPS2Q86UW7 1296 aa17.17■□□□□ 0.34
IRF9-211ENST00000560852 CENPJQ9HC77 1338 aaPredicted RBP17.17■□□□□ 0.34
IRF9-211ENST00000560852 MSH6P52701 1360 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms