RNA–Protein interactions for RNA: ENST00000560631.1

RNF31-222, Transcript of ring finger protein 31, human

TSL 2

Gene RNF31, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-222	ENST00000560631	PTPRT	O14522	1441 aa		12	□□□□□ -0.49
RNF31-222	ENST00000560631	UGGT1	Q9NYU2	1555 aa		12	□□□□□ -0.49
RNF31-222	ENST00000560631	UBR1	Q8IWV7	1749 aa		12	□□□□□ -0.49
RNF31-222	ENST00000560631	IDI1	Q13907	227 aa		11.99	□□□□□ -0.49
RNF31-222	ENST00000560631	TRIM52	Q96A61	297 aa		11.99	□□□□□ -0.49
RNF31-222	ENST00000560631	AKT1S1	Q96B36	256 aa		11.99	□□□□□ -0.49
RNF31-222	ENST00000560631	RAB3GAP2	Q9H2M9	1393 aa		11.99	□□□□□ -0.49
RNF31-222	ENST00000560631	PIK3C2B	O00750	1634 aa		11.99	□□□□□ -0.49
RNF31-222	ENST00000560631	SPHKAP	Q2M3C7	1700 aa		11.99	□□□□□ -0.49
RNF31-222	ENST00000560631	PKD2	Q13563	968 aa		11.98	□□□□□ -0.49
RNF31-222	ENST00000560631	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.96	□□□□□ -0.49
RNF31-222	ENST00000560631	SLIT1	O75093	1534 aa		11.96	□□□□□ -0.5
RNF31-222	ENST00000560631	ARHGAP23	Q9P227	1491 aa		11.95	□□□□□ -0.5
RNF31-222	ENST00000560631	MYO5B	Q9ULV0	1848 aa		11.95	□□□□□ -0.5
RNF31-222	ENST00000560631	TRIM26	Q12899	539 aa	Predicted RBP	11.95	□□□□□ -0.5
RNF31-222	ENST00000560631	SP7	Q8TDD2	431 aa	Predicted RBP	11.95	□□□□□ -0.5
RNF31-222	ENST00000560631	MPHOSPH9	Q99550	1183 aa		11.95	□□□□□ -0.5
RNF31-222	ENST00000560631	POLR1A	O95602	1720 aa	Predicted RBP	11.94	□□□□□ -0.5
RNF31-222	ENST00000560631	ANKLE2	Q86XL3	938 aa		11.94	□□□□□ -0.5
RNF31-222	ENST00000560631	ADGRB3	O60242	1522 aa		11.94	□□□□□ -0.5
RNF31-222	ENST00000560631	TMEM131L	A2VDJ0	1609 aa		11.93	□□□□□ -0.5
RNF31-222	ENST00000560631	TRPM2	O94759	1503 aa		11.93	□□□□□ -0.5
RNF31-222	ENST00000560631	MED14	O60244	1454 aa		11.93	□□□□□ -0.5
RNF31-222	ENST00000560631	TMEM2	Q9UHN6	1383 aa		11.92	□□□□□ -0.5
RNF31-222	ENST00000560631	NCKAP5L	Q9HCH0	1330 aa		11.91	□□□□□ -0.5
RNF31-222	ENST00000560631	KIF1B	O60333	1816 aa		11.91	□□□□□ -0.5
RNF31-222	ENST00000560631	STAG3	Q9UJ98	1225 aa		11.91	□□□□□ -0.5
RNF31-222	ENST00000560631	NEURL4	Q96JN8	1562 aa		11.91	□□□□□ -0.5
RNF31-222	ENST00000560631	CLTCL1	P53675	1640 aa		11.89	□□□□□ -0.51
RNF31-222	ENST00000560631	SCAF11	Q99590	1463 aa	Known RBP	11.89	□□□□□ -0.51
RNF31-222	ENST00000560631	LTK	P29376	864 aa		11.89	□□□□□ -0.51
RNF31-222	ENST00000560631	ZFYVE9	O95405	1425 aa		11.88	□□□□□ -0.51
RNF31-222	ENST00000560631	HDGF	P51858	240 aa	Known RBP	11.88	□□□□□ -0.51
RNF31-222	ENST00000560631	TXNDC2	Q86VQ3	553 aa		11.88	□□□□□ -0.51
RNF31-222	ENST00000560631	EID1	Q9Y6B2	187 aa		11.88	□□□□□ -0.51
RNF31-222	ENST00000560631	NPHP4	O75161	1426 aa	Predicted RBP	11.87	□□□□□ -0.51
RNF31-222	ENST00000560631	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
RNF31-222	ENST00000560631	IQGAP1	P46940	1657 aa		11.87	□□□□□ -0.51
RNF31-222	ENST00000560631	ANKRD30B	Q9BXX2	1392 aa		11.86	□□□□□ -0.51
RNF31-222	ENST00000560631	RIMS2	Q9UQ26	1411 aa		11.86	□□□□□ -0.51
RNF31-222	ENST00000560631	ATXN8OS	P0DMR3	200 aa		11.85	□□□□□ -0.51
RNF31-222	ENST00000560631	CHGA	P10645	457 aa	Known RBP	11.85	□□□□□ -0.51
RNF31-222	ENST00000560631	REM2	Q8IYK8	340 aa	Predicted RBP	11.85	□□□□□ -0.51
RNF31-222	ENST00000560631	CCDC144A	A2RUR9	1427 aa		11.85	□□□□□ -0.51
RNF31-222	ENST00000560631	RPGRIP1L	Q68CZ1	1315 aa		11.84	□□□□□ -0.51
RNF31-222	ENST00000560631	PLEKHG1	Q9ULL1	1385 aa		11.83	□□□□□ -0.52
RNF31-222	ENST00000560631	PIP4P2	Q8N4L2	257 aa		11.82	□□□□□ -0.52
RNF31-222	ENST00000560631	SPATA31E1	Q6ZUB1	1445 aa		11.82	□□□□□ -0.52
RNF31-222	ENST00000560631	LTBP4	Q8N2S1	1624 aa		11.82	□□□□□ -0.52
RNF31-222	ENST00000560631	NEXMIF	Q5QGS0	1516 aa		11.81	□□□□□ -0.52
RNF31-222	ENST00000560631	PPL	O60437	1756 aa		11.81	□□□□□ -0.52
RNF31-222	ENST00000560631	TBX22	Q9Y458	520 aa		11.8	□□□□□ -0.52
RNF31-222	ENST00000560631	VGF	O15240	615 aa	Predicted RBP	11.79	□□□□□ -0.52
RNF31-222	ENST00000560631	ZNF326	Q5BKZ1	582 aa	Known RBP	11.79	□□□□□ -0.52
RNF31-222	ENST00000560631	IFT172	Q9UG01	1749 aa		11.79	□□□□□ -0.52
RNF31-222	ENST00000560631	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	11.79	□□□□□ -0.52
RNF31-222	ENST00000560631	CHD2	O14647	1828 aa	Known RBP	11.78	□□□□□ -0.52
RNF31-222	ENST00000560631	DIP2A	Q14689	1571 aa		11.78	□□□□□ -0.52
RNF31-222	ENST00000560631	SETBP1	Q9Y6X0	1596 aa		11.78	□□□□□ -0.52
RNF31-222	ENST00000560631	ADAMTS13	Q76LX8	1427 aa		11.77	□□□□□ -0.52
RNF31-222	ENST00000560631	IQSEC2	Q5JU85	1478 aa		11.77	□□□□□ -0.52
RNF31-222	ENST00000560631	STRCP1	A6NGW2	1772 aa		11.77	□□□□□ -0.52
RNF31-222	ENST00000560631	PPP1R15A	O75807	674 aa	Predicted RBP	11.77	□□□□□ -0.53
RNF31-222	ENST00000560631	CERK	Q8TCT0	537 aa		11.77	□□□□□ -0.53
RNF31-222	ENST00000560631	STAC3	Q96MF2	364 aa		11.77	□□□□□ -0.53
RNF31-222	ENST00000560631	PIK3R4	Q99570	1358 aa		11.77	□□□□□ -0.53
RNF31-222	ENST00000560631	CPS1	P31327	1500 aa		11.76	□□□□□ -0.53
RNF31-222	ENST00000560631	NRXN3	Q9Y4C0	1643 aa		11.76	□□□□□ -0.53
RNF31-222	ENST00000560631	DHX57	Q6P158	1386 aa	Known RBP	11.76	□□□□□ -0.53
RNF31-222	ENST00000560631	HAX1	O00165	279 aa		11.75	□□□□□ -0.53
RNF31-222	ENST00000560631	KCNA6	P17658	529 aa		11.75	□□□□□ -0.53
RNF31-222	ENST00000560631	RGL3	Q3MIN7	710 aa		11.75	□□□□□ -0.53
RNF31-222	ENST00000560631	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.75	□□□□□ -0.53
RNF31-222	ENST00000560631	SLC26A8	Q96RN1	970 aa		11.75	□□□□□ -0.53
RNF31-222	ENST00000560631	NWD1	Q149M9	1564 aa		11.74	□□□□□ -0.53
RNF31-222	ENST00000560631	SETD1A	O15047	1707 aa	Known RBP	11.73	□□□□□ -0.53
RNF31-222	ENST00000560631	MYOM2	P54296	1465 aa		11.72	□□□□□ -0.53
RNF31-222	ENST00000560631	PITPNM1	O00562	1244 aa		11.72	□□□□□ -0.53
RNF31-222	ENST00000560631	BCAN	Q96GW7	911 aa		11.72	□□□□□ -0.53
RNF31-222	ENST00000560631	ALK	Q9UM73	1620 aa		11.71	□□□□□ -0.53
RNF31-222	ENST00000560631	NRXN1	Q9ULB1	1477 aa		11.71	□□□□□ -0.53
RNF31-222	ENST00000560631	ADGRF5	Q8IZF2	1346 aa		11.71	□□□□□ -0.53
RNF31-222	ENST00000560631	PCGF6	Q9BYE7	350 aa		11.71	□□□□□ -0.53
RNF31-222	ENST00000560631	NKTR	P30414	1462 aa	Known RBP	11.7	□□□□□ -0.54
RNF31-222	ENST00000560631	XIRP1	Q702N8	1843 aa	Known RBP	11.7	□□□□□ -0.54
RNF31-222	ENST00000560631	LRRC7	Q96NW7	1537 aa		11.7	□□□□□ -0.54
RNF31-222	ENST00000560631	PIK3C2G	O75747	1445 aa		11.69	□□□□□ -0.54
RNF31-222	ENST00000560631	PTPRU	Q92729	1446 aa		11.69	□□□□□ -0.54
RNF31-222	ENST00000560631	NCOA3	Q9Y6Q9	1424 aa		11.69	□□□□□ -0.54
RNF31-222	ENST00000560631	FXR2	P51116	673 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
RNF31-222	ENST00000560631	PRAG1	Q86YV5	1406 aa		11.69	□□□□□ -0.54
RNF31-222	ENST00000560631	MET	P08581	1390 aa		11.68	□□□□□ -0.54
RNF31-222	ENST00000560631	FBXO41	Q8TF61	875 aa		11.68	□□□□□ -0.54
RNF31-222	ENST00000560631	C14orf93	Q9H972	538 aa	Known RBP	11.68	□□□□□ -0.54
RNF31-222	ENST00000560631	XRN1	Q8IZH2	1706 aa	Known RBP	11.68	□□□□□ -0.54
RNF31-222	ENST00000560631	AMOTL2	Q9Y2J4	779 aa		11.67	□□□□□ -0.54
RNF31-222	ENST00000560631	LAMC1	P11047	1609 aa		11.67	□□□□□ -0.54
RNF31-222	ENST00000560631	CLSPN	Q9HAW4	1339 aa		11.66	□□□□□ -0.54
RNF31-222	ENST00000560631	PROSER2	Q86WR7	435 aa	Predicted RBP	11.66	□□□□□ -0.54
RNF31-222	ENST00000560631	DCAF11	Q8TEB1	546 aa		11.66	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms