RNA–Protein interactions for RNA: ENST00000560555.1

ALDH1A3-206, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 1 (best)

Gene ALDH1A3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-206ENST00000560555 FOXD1Q16676 465 aa18.24■□□□□ 0.51
ALDH1A3-206ENST00000560555 STRCP1A6NGW2 1772 aa18.24■□□□□ 0.51
ALDH1A3-206ENST00000560555 FAM135BQ49AJ0 1406 aa18.23■□□□□ 0.51
ALDH1A3-206ENST00000560555 SLIT1O75093 1534 aa18.23■□□□□ 0.51
ALDH1A3-206ENST00000560555 TMEM131LA2VDJ0 1609 aa18.23■□□□□ 0.51
ALDH1A3-206ENST00000560555 SPHKAPQ2M3C7 1700 aa18.23■□□□□ 0.51
ALDH1A3-206ENST00000560555 IQGAP1P46940 1657 aa18.23■□□□□ 0.51
ALDH1A3-206ENST00000560555 MPHOSPH9Q99550 1183 aa18.23■□□□□ 0.51
ALDH1A3-206ENST00000560555 SLC4A1APQ9BWU0 796 aaKnown RBP18.22■□□□□ 0.51
ALDH1A3-206ENST00000560555 HRCP23327 699 aa18.21■□□□□ 0.51
ALDH1A3-206ENST00000560555 TMEM2Q9UHN6 1383 aa18.2■□□□□ 0.5
ALDH1A3-206ENST00000560555 ADGRB3O60242 1522 aa18.19■□□□□ 0.5
ALDH1A3-206ENST00000560555 CLTCL1P53675 1640 aa18.19■□□□□ 0.5
ALDH1A3-206ENST00000560555 UPF1Q92900 1129 aaKnown RBP eCLIP18.18■□□□□ 0.5
ALDH1A3-206ENST00000560555 ZFYVE9O95405 1425 aa18.17■□□□□ 0.5
ALDH1A3-206ENST00000560555 TXNDC2Q86VQ3 553 aa18.17■□□□□ 0.5
ALDH1A3-206ENST00000560555 TRPM2O94759 1503 aa18.16■□□□□ 0.5
ALDH1A3-206ENST00000560555 SCAF11Q99590 1463 aaKnown RBP18.14■□□□□ 0.49
ALDH1A3-206ENST00000560555 STAG3Q9UJ98 1225 aa18.12■□□□□ 0.49
ALDH1A3-206ENST00000560555 SETD1AO15047 1707 aaKnown RBP18.11■□□□□ 0.49
ALDH1A3-206ENST00000560555 RIMS2Q9UQ26 1411 aa18.1■□□□□ 0.49
ALDH1A3-206ENST00000560555 TMEM94Q12767 1356 aa18.1■□□□□ 0.49
ALDH1A3-206ENST00000560555 ACIN1Q9UKV3 1341 aaKnown RBP18.09■□□□□ 0.49
ALDH1A3-206ENST00000560555 CHGAP10645 457 aaKnown RBP18.09■□□□□ 0.49
ALDH1A3-206ENST00000560555 KIF1BO60333 1816 aa18.08■□□□□ 0.48
ALDH1A3-206ENST00000560555 NUTM2DQ5VT03 806 aaPredicted RBP18.08■□□□□ 0.48
ALDH1A3-206ENST00000560555 TRIM26Q12899 539 aaPredicted RBP18.07■□□□□ 0.48
ALDH1A3-206ENST00000560555 EID1Q9Y6B2 187 aa18.07■□□□□ 0.48
ALDH1A3-206ENST00000560555 ANKRD30BQ9BXX2 1392 aa18.06■□□□□ 0.48
ALDH1A3-206ENST00000560555 RBM33Q96EV2 1170 aaKnown RBP18.06■□□□□ 0.48
ALDH1A3-206ENST00000560555 SPATA31E1Q6ZUB1 1445 aa18.06■□□□□ 0.48
ALDH1A3-206ENST00000560555 JCADQ9P266 1359 aa18.05■□□□□ 0.48
ALDH1A3-206ENST00000560555 NEXMIFQ5QGS0 1516 aa18.05■□□□□ 0.48
ALDH1A3-206ENST00000560555 KCNA6P17658 529 aa18.05■□□□□ 0.48
ALDH1A3-206ENST00000560555 PROSER2Q86WR7 435 aaPredicted RBP18.05■□□□□ 0.48
ALDH1A3-206ENST00000560555 ADAMTS13Q76LX8 1427 aa18.05■□□□□ 0.48
ALDH1A3-206ENST00000560555 SLC26A8Q96RN1 970 aa18.04■□□□□ 0.48
ALDH1A3-206ENST00000560555 XIRP1Q702N8 1843 aaKnown RBP18.04■□□□□ 0.48
ALDH1A3-206ENST00000560555 PLEKHG1Q9ULL1 1385 aa18.04■□□□□ 0.48
ALDH1A3-206ENST00000560555 ROBO1Q9Y6N7 1651 aa18.03■□□□□ 0.48
ALDH1A3-206ENST00000560555 ZNF772Q68DY9 489 aaPredicted RBP18.03■□□□□ 0.48
ALDH1A3-206ENST00000560555 NRXN3Q9Y4C0 1643 aa18.02■□□□□ 0.48
ALDH1A3-206ENST00000560555 SLAIN2Q9P270 581 aa18.01■□□□□ 0.47
ALDH1A3-206ENST00000560555 PPLO60437 1756 aa17.99■□□□□ 0.47
ALDH1A3-206ENST00000560555 MEX3CQ5U5Q3 659 aaKnown RBP17.99■□□□□ 0.47
ALDH1A3-206ENST00000560555 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.99■□□□□ 0.47
ALDH1A3-206ENST00000560555 TBX22Q9Y458 520 aa17.99■□□□□ 0.47
ALDH1A3-206ENST00000560555 CCDC144AA2RUR9 1427 aa17.98■□□□□ 0.47
ALDH1A3-206ENST00000560555 CHD2O14647 1828 aaKnown RBP17.98■□□□□ 0.47
ALDH1A3-206ENST00000560555 RXRBP28702 533 aa17.97■□□□□ 0.47
ALDH1A3-206ENST00000560555 HDGFP51858 240 aaKnown RBP17.97■□□□□ 0.47
ALDH1A3-206ENST00000560555 ZNF326Q5BKZ1 582 aaKnown RBP17.97■□□□□ 0.47
ALDH1A3-206ENST00000560555 IFT172Q9UG01 1749 aa17.97■□□□□ 0.47
ALDH1A3-206ENST00000560555 SPATA31A6Q5VVP1 1343 aa17.97■□□□□ 0.47
ALDH1A3-206ENST00000560555 RGL3Q3MIN7 710 aa17.96■□□□□ 0.47
ALDH1A3-206ENST00000560555 RPGRIP1LQ68CZ1 1315 aa17.96■□□□□ 0.46
ALDH1A3-206ENST00000560555 SETBP1Q9Y6X0 1596 aa17.96■□□□□ 0.46
ALDH1A3-206ENST00000560555 LRP6O75581 1613 aa17.95■□□□□ 0.46
ALDH1A3-206ENST00000560555 MSH6P52701 1360 aa17.95■□□□□ 0.46
ALDH1A3-206ENST00000560555 PTPRUQ92729 1446 aa17.95■□□□□ 0.46
ALDH1A3-206ENST00000560555 ADGRF5Q8IZF2 1346 aa17.94■□□□□ 0.46
ALDH1A3-206ENST00000560555 PPP1R15AO75807 674 aaPredicted RBP17.93■□□□□ 0.46
ALDH1A3-206ENST00000560555 METP08581 1390 aa17.92■□□□□ 0.46
ALDH1A3-206ENST00000560555 PHLPP1O60346 1717 aa17.92■□□□□ 0.46
ALDH1A3-206ENST00000560555 DHX57Q6P158 1386 aaKnown RBP17.91■□□□□ 0.46
ALDH1A3-206ENST00000560555 NWD1Q149M9 1564 aa17.91■□□□□ 0.46
ALDH1A3-206ENST00000560555 VGFO15240 615 aaPredicted RBP17.9■□□□□ 0.46
ALDH1A3-206ENST00000560555 BCANQ96GW7 911 aa17.89■□□□□ 0.45
ALDH1A3-206ENST00000560555 NKTRP30414 1462 aaKnown RBP17.88■□□□□ 0.45
ALDH1A3-206ENST00000560555 CDK12Q9NYV4 1490 aaPredicted RBP17.88■□□□□ 0.45
ALDH1A3-206ENST00000560555 DIP2AQ14689 1571 aa17.87■□□□□ 0.45
ALDH1A3-206ENST00000560555 SIN3AQ96ST3 1273 aa17.87■□□□□ 0.45
ALDH1A3-206ENST00000560555 NRXN1Q9ULB1 1477 aa17.87■□□□□ 0.45
ALDH1A3-206ENST00000560555 COL16A1Q07092 1604 aaPredicted RBP17.87■□□□□ 0.45
ALDH1A3-206ENST00000560555 PIK3R4Q99570 1358 aa17.86■□□□□ 0.45
ALDH1A3-206ENST00000560555 XRN1Q8IZH2 1706 aaKnown RBP17.85■□□□□ 0.45
ALDH1A3-206ENST00000560555 AMOTL2Q9Y2J4 779 aa17.85■□□□□ 0.45
ALDH1A3-206ENST00000560555 NUTM2BA6NNL0 878 aaPredicted RBP17.84■□□□□ 0.45
ALDH1A3-206ENST00000560555 NUTM2EB1AL46 878 aaPredicted RBP17.84■□□□□ 0.45
ALDH1A3-206ENST00000560555 NUTM2AQ8IVF1 878 aaPredicted RBP17.84■□□□□ 0.45
ALDH1A3-206ENST00000560555 PIK3C2GO75747 1445 aa17.83■□□□□ 0.45
ALDH1A3-206ENST00000560555 SRCAPQ6ZRS2 3230 aa17.83■□□□□ 0.44
ALDH1A3-206ENST00000560555 PCGF6Q9BYE7 350 aa17.83■□□□□ 0.44
ALDH1A3-206ENST00000560555 ASXL1Q8IXJ9 1541 aa17.82■□□□□ 0.44
ALDH1A3-206ENST00000560555 AFF2P51816 1311 aa17.82■□□□□ 0.44
ALDH1A3-206ENST00000560555 C14orf93Q9H972 538 aaKnown RBP17.81■□□□□ 0.44
ALDH1A3-206ENST00000560555 MYOM2P54296 1465 aa17.81■□□□□ 0.44
ALDH1A3-206ENST00000560555 CFAP70Q5T0N1 1121 aa17.79■□□□□ 0.44
ALDH1A3-206ENST00000560555 TMEM132EQ6IEE7 984 aa17.79■□□□□ 0.44
ALDH1A3-206ENST00000560555 C14orf37Q86TY3 774 aa17.79■□□□□ 0.44
ALDH1A3-206ENST00000560555 DCAF11Q8TEB1 546 aa17.79■□□□□ 0.44
ALDH1A3-206ENST00000560555 NCOA3Q9Y6Q9 1424 aa17.79■□□□□ 0.44
ALDH1A3-206ENST00000560555 CADPS2Q86UW7 1296 aa17.78■□□□□ 0.44
ALDH1A3-206ENST00000560555 QTRT2Q9H974 415 aaKnown RBP17.78■□□□□ 0.44
ALDH1A3-206ENST00000560555 RBM6P78332 1123 aaKnown RBP17.77■□□□□ 0.44
ALDH1A3-206ENST00000560555 KDM2AQ9Y2K7 1162 aa17.77■□□□□ 0.44
ALDH1A3-206ENST00000560555 RGS12O14924 1447 aa17.77■□□□□ 0.44
ALDH1A3-206ENST00000560555 PRAG1Q86YV5 1406 aa17.76■□□□□ 0.43
ALDH1A3-206ENST00000560555 ATF3P18847 181 aa17.76■□□□□ 0.43
ALDH1A3-206ENST00000560555 C19orf44Q9H6X5 657 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms