RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 TMEM94Q12767 1356 aa16.39■□□□□ 0.21
CDC42BPB-207ENST00000560492 RBM33Q96EV2 1170 aaKnown RBP16.39■□□□□ 0.21
CDC42BPB-207ENST00000560492 ANKRD30AQ9BXX3 1397 aa16.38■□□□□ 0.21
CDC42BPB-207ENST00000560492 ADGRB3O60242 1522 aa16.37■□□□□ 0.21
CDC42BPB-207ENST00000560492 IDI1Q13907 227 aa16.37■□□□□ 0.21
CDC42BPB-207ENST00000560492 FGD6Q6ZV73 1430 aa16.36■□□□□ 0.21
CDC42BPB-207ENST00000560492 MYO5BQ9ULV0 1848 aa16.36■□□□□ 0.21
CDC42BPB-207ENST00000560492 FAM135BQ49AJ0 1406 aa16.36■□□□□ 0.21
CDC42BPB-207ENST00000560492 KCNA6P17658 529 aa16.35■□□□□ 0.21
CDC42BPB-207ENST00000560492 C1QBPQ07021 282 aaKnown RBP16.35■□□□□ 0.21
CDC42BPB-207ENST00000560492 PHLPP1O60346 1717 aa16.35■□□□□ 0.21
CDC42BPB-207ENST00000560492 PPP1R15AO75807 674 aaPredicted RBP16.34■□□□□ 0.21
CDC42BPB-207ENST00000560492 RGS17Q9UGC6 210 aaPredicted RBP16.34■□□□□ 0.21
CDC42BPB-207ENST00000560492 MSH6P52701 1360 aa16.34■□□□□ 0.21
CDC42BPB-207ENST00000560492 LMTK2Q8IWU2 1503 aa16.34■□□□□ 0.21
CDC42BPB-207ENST00000560492 GCC2Q8IWJ2 1684 aa16.34■□□□□ 0.21
CDC42BPB-207ENST00000560492 NKTRP30414 1462 aaKnown RBP16.32■□□□□ 0.2
CDC42BPB-207ENST00000560492 FAM50AQ14320 339 aaKnown RBP16.32■□□□□ 0.2
CDC42BPB-207ENST00000560492 TET3O43151 1660 aa16.31■□□□□ 0.2
CDC42BPB-207ENST00000560492 C14orf37Q86TY3 774 aa16.31■□□□□ 0.2
CDC42BPB-207ENST00000560492 SETD1AO15047 1707 aaKnown RBP16.31■□□□□ 0.2
CDC42BPB-207ENST00000560492 NWD1Q149M9 1564 aa16.3■□□□□ 0.2
CDC42BPB-207ENST00000560492 CHGAP10645 457 aaKnown RBP16.3■□□□□ 0.2
CDC42BPB-207ENST00000560492 NOS1P29475 1434 aa16.29■□□□□ 0.2
CDC42BPB-207ENST00000560492 CHD2O14647 1828 aaKnown RBP16.29■□□□□ 0.2
CDC42BPB-207ENST00000560492 POTEAQ6S8J7 498 aa16.29■□□□□ 0.2
CDC42BPB-207ENST00000560492 SLC52A1Q9NWF4 448 aa16.29■□□□□ 0.2
CDC42BPB-207ENST00000560492 HDGFP51858 240 aaKnown RBP16.26■□□□□ 0.19
CDC42BPB-207ENST00000560492 SLAIN2Q9P270 581 aa16.26■□□□□ 0.19
CDC42BPB-207ENST00000560492 RIMS2Q9UQ26 1411 aa16.26■□□□□ 0.19
CDC42BPB-207ENST00000560492 MEX3CQ5U5Q3 659 aaKnown RBP16.25■□□□□ 0.19
CDC42BPB-207ENST00000560492 ADGRL2O95490 1459 aa16.24■□□□□ 0.19
CDC42BPB-207ENST00000560492 RPRD2Q5VT52 1461 aaKnown RBP16.24■□□□□ 0.19
CDC42BPB-207ENST00000560492 ANKRD50Q9ULJ7 1429 aa16.24■□□□□ 0.19
CDC42BPB-207ENST00000560492 JCADQ9P266 1359 aa16.24■□□□□ 0.19
CDC42BPB-207ENST00000560492 PLEKHG1Q9ULL1 1385 aa16.24■□□□□ 0.19
CDC42BPB-207ENST00000560492 TMEM131LA2VDJ0 1609 aa16.23■□□□□ 0.19
CDC42BPB-207ENST00000560492 NUTM2DQ5VT03 806 aaPredicted RBP16.23■□□□□ 0.19
CDC42BPB-207ENST00000560492 ZFYVE9O95405 1425 aa16.21■□□□□ 0.19
CDC42BPB-207ENST00000560492 COL16A1Q07092 1604 aaPredicted RBP16.2■□□□□ 0.18
CDC42BPB-207ENST00000560492 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.2■□□□□ 0.18
CDC42BPB-207ENST00000560492 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.19■□□□□ 0.18
CDC42BPB-207ENST00000560492 E9PCH4 1651 aa16.19■□□□□ 0.18
CDC42BPB-207ENST00000560492 ATF3P18847 181 aa16.19■□□□□ 0.18
CDC42BPB-207ENST00000560492 UNC13BO14795 1591 aa16.18■□□□□ 0.18
CDC42BPB-207ENST00000560492 KCNA4P22459 653 aa16.18■□□□□ 0.18
CDC42BPB-207ENST00000560492 DIP2AQ14689 1571 aa16.17■□□□□ 0.18
CDC42BPB-207ENST00000560492 TRIM52Q96A61 297 aa16.16■□□□□ 0.18
CDC42BPB-207ENST00000560492 TBX22Q9Y458 520 aa16.16■□□□□ 0.18
CDC42BPB-207ENST00000560492 SHPRHQ149N8 1683 aa16.15■□□□□ 0.18
CDC42BPB-207ENST00000560492 CADPS2Q86UW7 1296 aa16.15■□□□□ 0.18
CDC42BPB-207ENST00000560492 SPATA31A6Q5VVP1 1343 aa16.15■□□□□ 0.18
CDC42BPB-207ENST00000560492 TRPM2O94759 1503 aa16.14■□□□□ 0.18
CDC42BPB-207ENST00000560492 NUTM2BA6NNL0 878 aaPredicted RBP16.14■□□□□ 0.17
CDC42BPB-207ENST00000560492 NUTM2EB1AL46 878 aaPredicted RBP16.14■□□□□ 0.17
CDC42BPB-207ENST00000560492 NUTM2AQ8IVF1 878 aaPredicted RBP16.14■□□□□ 0.17
CDC42BPB-207ENST00000560492 LRP6O75581 1613 aa16.14■□□□□ 0.17
CDC42BPB-207ENST00000560492 NCOA3Q9Y6Q9 1424 aa16.13■□□□□ 0.17
CDC42BPB-207ENST00000560492 IQGAP3Q86VI3 1631 aa16.13■□□□□ 0.17
CDC42BPB-207ENST00000560492 ITGAEP38570 1179 aa16.13■□□□□ 0.17
CDC42BPB-207ENST00000560492 ZNF772Q68DY9 489 aaPredicted RBP16.13■□□□□ 0.17
CDC42BPB-207ENST00000560492 AHDC1Q5TGY3 1603 aaPredicted RBP16.12■□□□□ 0.17
CDC42BPB-207ENST00000560492 C19orf44Q9H6X5 657 aa16.12■□□□□ 0.17
CDC42BPB-207ENST00000560492 ADAMTS13Q76LX8 1427 aa16.11■□□□□ 0.17
CDC42BPB-207ENST00000560492 AMOTL2Q9Y2J4 779 aa16.1■□□□□ 0.17
CDC42BPB-207ENST00000560492 PIK3R4Q99570 1358 aa16.1■□□□□ 0.17
CDC42BPB-207ENST00000560492 ZNF326Q5BKZ1 582 aaKnown RBP16.09■□□□□ 0.17
CDC42BPB-207ENST00000560492 NUP155O75694 1391 aa16.09■□□□□ 0.17
CDC42BPB-207ENST00000560492 SPHKAPQ2M3C7 1700 aa16.08■□□□□ 0.17
CDC42BPB-207ENST00000560492 RXRBP28702 533 aa16.06■□□□□ 0.16
CDC42BPB-207ENST00000560492 BRINP3Q76B58 766 aa16.06■□□□□ 0.16
CDC42BPB-207ENST00000560492 ASXL1Q8IXJ9 1541 aa16.05■□□□□ 0.16
CDC42BPB-207ENST00000560492 PTPRUQ92729 1446 aa16.05■□□□□ 0.16
CDC42BPB-207ENST00000560492 ROCK1Q13464 1354 aa16.04■□□□□ 0.16
CDC42BPB-207ENST00000560492 UPF1Q92900 1129 aaKnown RBP eCLIP16.04■□□□□ 0.16
CDC42BPB-207ENST00000560492 XRN1Q8IZH2 1706 aaKnown RBP16.04■□□□□ 0.16
CDC42BPB-207ENST00000560492 AFF2P51816 1311 aa16.03■□□□□ 0.16
CDC42BPB-207ENST00000560492 NHSL1Q5SYE7 1610 aa16.03■□□□□ 0.16
CDC42BPB-207ENST00000560492 DCCP43146 1447 aa16.02■□□□□ 0.16
CDC42BPB-207ENST00000560492 NRXN3Q9Y4C0 1643 aa16.02■□□□□ 0.16
CDC42BPB-207ENST00000560492 SETBP1Q9Y6X0 1596 aa16.01■□□□□ 0.15
CDC42BPB-207ENST00000560492 C8orf37Q96NL8 207 aa16.01■□□□□ 0.15
CDC42BPB-207ENST00000560492 NALCNQ8IZF0 1738 aa16.01■□□□□ 0.15
CDC42BPB-207ENST00000560492 KIF1BO60333 1816 aa16.01■□□□□ 0.15
CDC42BPB-207ENST00000560492 PPARGC1BQ86YN6 1023 aaKnown RBP16■□□□□ 0.15
CDC42BPB-207ENST00000560492 MST1RQ04912 1400 aa16■□□□□ 0.15
CDC42BPB-207ENST00000560492 LRRC59Q96AG4 307 aaKnown RBP15.99■□□□□ 0.15
CDC42BPB-207ENST00000560492 DDX17Q92841 729 aaKnown RBP15.98■□□□□ 0.15
CDC42BPB-207ENST00000560492 SETD5Q9C0A6 1442 aa15.97■□□□□ 0.15
CDC42BPB-207ENST00000560492 METP08581 1390 aa15.97■□□□□ 0.15
CDC42BPB-207ENST00000560492 CLTCL1P53675 1640 aa15.97■□□□□ 0.15
CDC42BPB-207ENST00000560492 CDK12Q9NYV4 1490 aaPredicted RBP15.97■□□□□ 0.15
CDC42BPB-207ENST00000560492 ADGRL3Q9HAR2 1447 aa15.96■□□□□ 0.15
CDC42BPB-207ENST00000560492 ADAMTS2O95450 1211 aa15.95■□□□□ 0.14
CDC42BPB-207ENST00000560492 QTRT2Q9H974 415 aaKnown RBP15.95■□□□□ 0.14
CDC42BPB-207ENST00000560492 NGLY1Q96IV0 654 aa15.94■□□□□ 0.14
CDC42BPB-207ENST00000560492 U3KPZ7 1027 aaPredicted RBP15.94■□□□□ 0.14
CDC42BPB-207ENST00000560492 PNPLA6Q8IY17 1366 aa15.94■□□□□ 0.14
CDC42BPB-207ENST00000560492 NEXMIFQ5QGS0 1516 aa15.94■□□□□ 0.14
CDC42BPB-207ENST00000560492 RBM6P78332 1123 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms