RNA–Protein interactions for RNA: ENST00000560409.5

SEC11A-210, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 3

Gene SEC11A, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-210ENST00000560409 LAMC3Q9Y6N6 1575 aa11.83□□□□□ -0.52
SEC11A-210ENST00000560409 LSM11P83369 360 aaKnown RBP eCLIP11.82□□□□□ -0.52
SEC11A-210ENST00000560409 PARP9Q8IXQ6 854 aa11.82□□□□□ -0.52
SEC11A-210ENST00000560409 TMUB1Q9BVT8 246 aa11.82□□□□□ -0.52
SEC11A-210ENST00000560409 PNMA3Q9UL41 463 aa11.82□□□□□ -0.52
SEC11A-210ENST00000560409 KIF21AQ7Z4S6 1674 aa11.81□□□□□ -0.52
SEC11A-210ENST00000560409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.8□□□□□ -0.52
SEC11A-210ENST00000560409 CLCN1P35523 988 aa11.8□□□□□ -0.52
SEC11A-210ENST00000560409 KDM4CQ9H3R0 1056 aa11.8□□□□□ -0.52
SEC11A-210ENST00000560409 GPBP1L1Q9HC44 474 aaPredicted RBP11.8□□□□□ -0.52
SEC11A-210ENST00000560409 ABCC8Q09428 1581 aa11.79□□□□□ -0.52
SEC11A-210ENST00000560409 TTLL12Q14166 644 aaPredicted RBP11.79□□□□□ -0.52
SEC11A-210ENST00000560409 RCCD1A6NED2 376 aa11.78□□□□□ -0.52
SEC11A-210ENST00000560409 BHMG1C9JSJ3 638 aaPredicted RBP11.78□□□□□ -0.52
SEC11A-210ENST00000560409 ADGRD1Q6QNK2 874 aa11.78□□□□□ -0.52
SEC11A-210ENST00000560409 GPCPD1Q9NPB8 672 aa11.78□□□□□ -0.52
SEC11A-210ENST00000560409 ERCC6Q03468 1493 aa11.77□□□□□ -0.52
SEC11A-210ENST00000560409 DNAJB2P25686 324 aa11.77□□□□□ -0.53
SEC11A-210ENST00000560409 MDM2Q00987 491 aaPredicted RBP11.77□□□□□ -0.53
SEC11A-210ENST00000560409 REPIN1Q9BWE0 567 aaKnown RBP11.77□□□□□ -0.53
SEC11A-210ENST00000560409 THOC2Q8NI27 1593 aaKnown RBP11.76□□□□□ -0.53
SEC11A-210ENST00000560409 SMAPO00193 183 aa11.76□□□□□ -0.53
SEC11A-210ENST00000560409 GIGYF2Q6Y7W6 1299 aaKnown RBP11.76□□□□□ -0.53
SEC11A-210ENST00000560409 NBPF3Q9H094 633 aa11.76□□□□□ -0.53
SEC11A-210ENST00000560409 HRO43593 1189 aa11.75□□□□□ -0.53
SEC11A-210ENST00000560409 POTEGQ6S5H5 508 aa11.75□□□□□ -0.53
SEC11A-210ENST00000560409 LAPTM4BQ86VI4 370 aa11.75□□□□□ -0.53
SEC11A-210ENST00000560409 TMEM134Q9H6X4 195 aa11.75□□□□□ -0.53
SEC11A-210ENST00000560409 POTEMA6NI47 508 aa11.74□□□□□ -0.53
SEC11A-210ENST00000560409 FAM98CQ17RN3 349 aaKnown RBP11.74□□□□□ -0.53
SEC11A-210ENST00000560409 KRTAP3-3Q9BYR6 98 aa11.74□□□□□ -0.53
SEC11A-210ENST00000560409 KRTAP3-2Q9BYR7 98 aa11.74□□□□□ -0.53
SEC11A-210ENST00000560409 DAXXQ9UER7 740 aaPredicted RBP11.74□□□□□ -0.53
SEC11A-210ENST00000560409 SYNJ1O43426 1573 aa11.73□□□□□ -0.53
SEC11A-210ENST00000560409 NLRP7Q8WX94 980 aa11.73□□□□□ -0.53
SEC11A-210ENST00000560409 FANCD2Q9BXW9 1451 aa11.73□□□□□ -0.53
SEC11A-210ENST00000560409 ANKRD13DQ6ZTN6 518 aa11.72□□□□□ -0.53
SEC11A-210ENST00000560409 SEPT9Q9UHD8 586 aaPredicted RBP11.72□□□□□ -0.53
SEC11A-210ENST00000560409 WRNQ14191 1432 aaPredicted RBP eCLIP11.71□□□□□ -0.53
SEC11A-210ENST00000560409 TMEM132AQ24JP5 1023 aa11.71□□□□□ -0.53
SEC11A-210ENST00000560409 FAM217BQ9NTX9 383 aaPredicted RBP11.71□□□□□ -0.53
SEC11A-210ENST00000560409 BIVM-ERCC5R4GMW8 1640 aa11.7□□□□□ -0.54
SEC11A-210ENST00000560409 MS4A1P11836 297 aa11.69□□□□□ -0.54
SEC11A-210ENST00000560409 SSTR3P32745 418 aaPredicted RBP11.69□□□□□ -0.54
SEC11A-210ENST00000560409 CDAN1Q8IWY9 1227 aa11.69□□□□□ -0.54
SEC11A-210ENST00000560409 MRPL50Q8N5N7 158 aaKnown RBP11.69□□□□□ -0.54
SEC11A-210ENST00000560409 TOP2BQ02880 1626 aa11.68□□□□□ -0.54
SEC11A-210ENST00000560409 DDRGK1Q96HY6 314 aa11.68□□□□□ -0.54
SEC11A-210ENST00000560409 CUX1P39880 1505 aa11.68□□□□□ -0.54
SEC11A-210ENST00000560409 CEP164Q9UPV0 1460 aa11.68□□□□□ -0.54
SEC11A-210ENST00000560409 PDS5BQ9NTI5 1447 aa11.68□□□□□ -0.54
SEC11A-210ENST00000560409 SULF1Q8IWU6 871 aa11.67□□□□□ -0.54
SEC11A-210ENST00000560409 FAM117AQ9C073 453 aa11.67□□□□□ -0.54
SEC11A-210ENST00000560409 CUX2O14529 1486 aa11.67□□□□□ -0.54
SEC11A-210ENST00000560409 ZFRQ96KR1 1074 aaKnown RBP11.66□□□□□ -0.54
SEC11A-210ENST00000560409 HDGFP51858 240 aaKnown RBP11.65□□□□□ -0.54
SEC11A-210ENST00000560409 DNMBPQ6XZF7 1577 aa11.64□□□□□ -0.55
SEC11A-210ENST00000560409 SWT1Q5T5J6 900 aaKnown RBP11.64□□□□□ -0.55
SEC11A-210ENST00000560409 PLEKHG3A1L390 1219 aa11.63□□□□□ -0.55
SEC11A-210ENST00000560409 IL27Q8NEV9 243 aa11.63□□□□□ -0.55
SEC11A-210ENST00000560409 STAC3Q96MF2 364 aa11.63□□□□□ -0.55
SEC11A-210ENST00000560409 URB2Q14146 1524 aaKnown RBP11.62□□□□□ -0.55
SEC11A-210ENST00000560409 CD46P15529 392 aa11.62□□□□□ -0.55
SEC11A-210ENST00000560409 SAMD7Q7Z3H4 446 aa11.62□□□□□ -0.55
SEC11A-210ENST00000560409 SLC4A3P48751 1232 aa11.61□□□□□ -0.55
SEC11A-210ENST00000560409 BEGAINQ9BUH8 593 aa11.61□□□□□ -0.55
SEC11A-210ENST00000560409 TOPBP1Q92547 1522 aa11.6□□□□□ -0.55
SEC11A-210ENST00000560409 MRC2Q9UBG0 1479 aa11.6□□□□□ -0.55
SEC11A-210ENST00000560409 DDX11L8A8MPP1 907 aa11.6□□□□□ -0.55
SEC11A-210ENST00000560409 RSPH4AQ5TD94 716 aa11.6□□□□□ -0.55
SEC11A-210ENST00000560409 SLF2Q8IX21 1173 aa11.6□□□□□ -0.55
SEC11A-210ENST00000560409 WDR62O43379 1518 aa11.59□□□□□ -0.55
SEC11A-210ENST00000560409 GOLGA8CPA6NN73 597 aa11.58□□□□□ -0.56
SEC11A-210ENST00000560409 PCDH10Q9P2E7 1040 aa11.58□□□□□ -0.56
SEC11A-210ENST00000560409 SLC10A3P09131 477 aa11.57□□□□□ -0.56
SEC11A-210ENST00000560409 LRCH3Q96II8 777 aa11.57□□□□□ -0.56
SEC11A-210ENST00000560409 FGD5Q6ZNL6 1462 aa11.57□□□□□ -0.56
SEC11A-210ENST00000560409 ANKK1Q8NFD2 765 aa11.56□□□□□ -0.56
SEC11A-210ENST00000560409 GOPCQ9HD26 462 aa11.56□□□□□ -0.56
SEC11A-210ENST00000560409 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.56□□□□□ -0.56
SEC11A-210ENST00000560409 DIXDC1Q155Q3 683 aa11.55□□□□□ -0.56
SEC11A-210ENST00000560409 RDH13Q8NBN7 331 aa11.55□□□□□ -0.56
SEC11A-210ENST00000560409 NECTIN2Q92692 538 aa11.55□□□□□ -0.56
SEC11A-210ENST00000560409 SOWAHBA6NEL2 793 aa11.54□□□□□ -0.56
SEC11A-210ENST00000560409 WNT2BQ93097 391 aa11.54□□□□□ -0.56
SEC11A-210ENST00000560409 RSPH6AQ9H0K4 717 aa11.54□□□□□ -0.56
SEC11A-210ENST00000560409 POLA1P09884 1462 aaPredicted RBP11.53□□□□□ -0.56
SEC11A-210ENST00000560409 GCGRP47871 477 aa11.53□□□□□ -0.56
SEC11A-210ENST00000560409 SH3D19Q5HYK7 790 aa11.52□□□□□ -0.57
SEC11A-210ENST00000560409 WDR97A6NE52 1622 aa11.52□□□□□ -0.57
SEC11A-210ENST00000560409 SPIRE2Q8WWL2 714 aa11.51□□□□□ -0.57
SEC11A-210ENST00000560409 SOGA1O94964 1423 aa11.51□□□□□ -0.57
SEC11A-210ENST00000560409 NUTM1Q86Y26 1132 aa11.5□□□□□ -0.57
SEC11A-210ENST00000560409 TBC1D2Q9BYX2 928 aa11.5□□□□□ -0.57
SEC11A-210ENST00000560409 RNF40O75150 1001 aa11.49□□□□□ -0.57
SEC11A-210ENST00000560409 TSR3Q9UJK0 312 aaKnown RBP11.49□□□□□ -0.57
SEC11A-210ENST00000560409 KDM4AO75164 1064 aa11.48□□□□□ -0.57
SEC11A-210ENST00000560409 BCAMP50895 628 aa11.48□□□□□ -0.57
SEC11A-210ENST00000560409 USP46P62068 366 aa11.48□□□□□ -0.57
SEC11A-210ENST00000560409 SKIV2LQ15477 1246 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms