RNA–Protein interactions for RNA: ENST00000560356.5

CPNE6-215, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-215ENST00000560356 NOS1P29475 1434 aa23.84■■□□□ 1.41
CPNE6-215ENST00000560356 GCC2Q8IWJ2 1684 aa23.83■■□□□ 1.41
CPNE6-215ENST00000560356 LRP6O75581 1613 aa23.81■■□□□ 1.4
CPNE6-215ENST00000560356 SHPRHQ149N8 1683 aa23.8■■□□□ 1.4
CPNE6-215ENST00000560356 SLAIN2Q9P270 581 aa23.8■■□□□ 1.4
CPNE6-215ENST00000560356 BCANQ96GW7 911 aa23.79■■□□□ 1.4
CPNE6-215ENST00000560356 ZFYVE9O95405 1425 aa23.76■■□□□ 1.39
CPNE6-215ENST00000560356 AHDC1Q5TGY3 1603 aaPredicted RBP23.76■■□□□ 1.39
CPNE6-215ENST00000560356 FGD6Q6ZV73 1430 aa23.76■■□□□ 1.39
CPNE6-215ENST00000560356 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.75■■□□□ 1.39
CPNE6-215ENST00000560356 ANKRD30AQ9BXX3 1397 aa23.75■■□□□ 1.39
CPNE6-215ENST00000560356 PLEKHG1Q9ULL1 1385 aa23.75■■□□□ 1.39
CPNE6-215ENST00000560356 TMEM131LA2VDJ0 1609 aa23.73■■□□□ 1.39
CPNE6-215ENST00000560356 SLC52A1Q9NWF4 448 aa23.73■■□□□ 1.39
CPNE6-215ENST00000560356 SPATA31A6Q5VVP1 1343 aa23.73■■□□□ 1.39
CPNE6-215ENST00000560356 RPRD2Q5VT52 1461 aaKnown RBP23.73■■□□□ 1.39
CPNE6-215ENST00000560356 MEX3CQ5U5Q3 659 aaKnown RBP23.72■■□□□ 1.39
CPNE6-215ENST00000560356 RIMS2Q9UQ26 1411 aa23.71■■□□□ 1.39
CPNE6-215ENST00000560356 UPF1Q92900 1129 aaKnown RBP eCLIP23.71■■□□□ 1.39
CPNE6-215ENST00000560356 ZNF772Q68DY9 489 aaPredicted RBP23.7■■□□□ 1.38
CPNE6-215ENST00000560356 TRIM52Q96A61 297 aa23.7■■□□□ 1.38
CPNE6-215ENST00000560356 CHIC2Q9UKJ5 165 aa23.7■■□□□ 1.38
CPNE6-215ENST00000560356 NCOA3Q9Y6Q9 1424 aa23.69■■□□□ 1.38
CPNE6-215ENST00000560356 PPP1R15AO75807 674 aaPredicted RBP23.69■■□□□ 1.38
CPNE6-215ENST00000560356 DIP2AQ14689 1571 aa23.69■■□□□ 1.38
CPNE6-215ENST00000560356 ADGRL2O95490 1459 aa23.67■■□□□ 1.38
CPNE6-215ENST00000560356 LOC105371045A0A1W2PR82 267 aa23.66■■□□□ 1.38
CPNE6-215ENST00000560356 C14orf37Q86TY3 774 aa23.66■■□□□ 1.38
CPNE6-215ENST00000560356 ADAMTS13Q76LX8 1427 aa23.62■■□□□ 1.37
CPNE6-215ENST00000560356 CADPS2Q86UW7 1296 aa23.62■■□□□ 1.37
CPNE6-215ENST00000560356 CDK12Q9NYV4 1490 aaPredicted RBP23.62■■□□□ 1.37
CPNE6-215ENST00000560356 HDGFP51858 240 aaKnown RBP23.61■■□□□ 1.37
CPNE6-215ENST00000560356 TBX22Q9Y458 520 aa23.61■■□□□ 1.37
CPNE6-215ENST00000560356 UNC13BO14795 1591 aa23.6■■□□□ 1.37
CPNE6-215ENST00000560356 E9PCH4 1651 aa23.6■■□□□ 1.37
CPNE6-215ENST00000560356 TRPM2O94759 1503 aa23.59■■□□□ 1.37
CPNE6-215ENST00000560356 NHSL1Q5SYE7 1610 aa23.59■■□□□ 1.37
CPNE6-215ENST00000560356 ATF3P18847 181 aa23.59■■□□□ 1.37
CPNE6-215ENST00000560356 RXRBP28702 533 aa23.59■■□□□ 1.37
CPNE6-215ENST00000560356 ANKRD50Q9ULJ7 1429 aa23.59■■□□□ 1.37
CPNE6-215ENST00000560356 PIK3R4Q99570 1358 aa23.58■■□□□ 1.37
CPNE6-215ENST00000560356 C19orf44Q9H6X5 657 aa23.57■■□□□ 1.36
CPNE6-215ENST00000560356 ASXL1Q8IXJ9 1541 aa23.57■■□□□ 1.36
CPNE6-215ENST00000560356 APLP2Q06481 763 aa23.56■■□□□ 1.36
CPNE6-215ENST00000560356 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.56■■□□□ 1.36
CPNE6-215ENST00000560356 XRN1Q8IZH2 1706 aaKnown RBP23.54■■□□□ 1.36
CPNE6-215ENST00000560356 NUTM2BA6NNL0 878 aaPredicted RBP23.54■■□□□ 1.36
CPNE6-215ENST00000560356 NUTM2EB1AL46 878 aaPredicted RBP23.54■■□□□ 1.36
CPNE6-215ENST00000560356 CHGAP10645 457 aaKnown RBP23.54■■□□□ 1.36
CPNE6-215ENST00000560356 NUTM2DQ5VT03 806 aaPredicted RBP23.54■■□□□ 1.36
CPNE6-215ENST00000560356 BRINP3Q76B58 766 aa23.54■■□□□ 1.36
CPNE6-215ENST00000560356 NUTM2AQ8IVF1 878 aaPredicted RBP23.54■■□□□ 1.36
CPNE6-215ENST00000560356 DCCP43146 1447 aa23.52■■□□□ 1.36
CPNE6-215ENST00000560356 AFF2P51816 1311 aa23.52■■□□□ 1.36
CPNE6-215ENST00000560356 PTPRUQ92729 1446 aa23.51■■□□□ 1.35
CPNE6-215ENST00000560356 NRXN3Q9Y4C0 1643 aa23.51■■□□□ 1.35
CPNE6-215ENST00000560356 RGS12O14924 1447 aa23.5■■□□□ 1.35
CPNE6-215ENST00000560356 IQGAP3Q86VI3 1631 aa23.5■■□□□ 1.35
CPNE6-215ENST00000560356 SETD5Q9C0A6 1442 aa23.5■■□□□ 1.35
CPNE6-215ENST00000560356 AMOTL2Q9Y2J4 779 aa23.47■■□□□ 1.35
CPNE6-215ENST00000560356 MST1RQ04912 1400 aa23.47■■□□□ 1.35
CPNE6-215ENST00000560356 NALCNQ8IZF0 1738 aa23.45■■□□□ 1.34
CPNE6-215ENST00000560356 SETBP1Q9Y6X0 1596 aa23.44■■□□□ 1.34
CPNE6-215ENST00000560356 FAM50AQ14320 339 aaKnown RBP23.44■■□□□ 1.34
CPNE6-215ENST00000560356 SRCAPQ6ZRS2 3230 aa23.42■■□□□ 1.34
CPNE6-215ENST00000560356 C8orf37Q96NL8 207 aa23.41■■□□□ 1.34
CPNE6-215ENST00000560356 PNPLA6Q8IY17 1366 aa23.4■■□□□ 1.34
CPNE6-215ENST00000560356 SPHKAPQ2M3C7 1700 aa23.4■■□□□ 1.34
CPNE6-215ENST00000560356 RBM6P78332 1123 aaKnown RBP23.39■■□□□ 1.33
CPNE6-215ENST00000560356 LRRC59Q96AG4 307 aaKnown RBP23.39■■□□□ 1.33
CPNE6-215ENST00000560356 ADGRL3Q9HAR2 1447 aa23.37■■□□□ 1.33
CPNE6-215ENST00000560356 QTRT2Q9H974 415 aaKnown RBP23.37■■□□□ 1.33
CPNE6-215ENST00000560356 LAMC1P11047 1609 aa23.36■■□□□ 1.33
CPNE6-215ENST00000560356 DDX17Q92841 729 aaKnown RBP23.35■■□□□ 1.33
CPNE6-215ENST00000560356 METP08581 1390 aa23.32■■□□□ 1.32
CPNE6-215ENST00000560356 ATAD2Q6PL18 1390 aa23.32■■□□□ 1.32
CPNE6-215ENST00000560356 ROCK1Q13464 1354 aa23.29■■□□□ 1.32
CPNE6-215ENST00000560356 ADAMTS2O95450 1211 aa23.29■■□□□ 1.32
CPNE6-215ENST00000560356 NEXMIFQ5QGS0 1516 aa23.28■■□□□ 1.32
CPNE6-215ENST00000560356 NUP155O75694 1391 aa23.28■■□□□ 1.32
CPNE6-215ENST00000560356 NGLY1Q96IV0 654 aa23.28■■□□□ 1.32
CPNE6-215ENST00000560356 EP400Q96L91 3159 aa23.27■■□□□ 1.32
CPNE6-215ENST00000560356 C1orf167Q5SNV9 1468 aa23.27■■□□□ 1.32
CPNE6-215ENST00000560356 COL22A1Q8NFW1 1626 aaPredicted RBP23.26■■□□□ 1.31
CPNE6-215ENST00000560356 MARF1Q9Y4F3 1742 aaKnown RBP23.25■■□□□ 1.31
CPNE6-215ENST00000560356 ZNF326Q5BKZ1 582 aaKnown RBP23.25■■□□□ 1.31
CPNE6-215ENST00000560356 CLTCL1P53675 1640 aa23.25■■□□□ 1.31
CPNE6-215ENST00000560356 KIF1BO60333 1816 aa23.24■■□□□ 1.31
CPNE6-215ENST00000560356 PTCH1Q13635 1447 aa23.23■■□□□ 1.31
CPNE6-215ENST00000560356 USP21Q9UK80 565 aa23.22■■□□□ 1.31
CPNE6-215ENST00000560356 TRPC5Q9UL62 973 aaPredicted RBP23.21■■□□□ 1.31
CPNE6-215ENST00000560356 ATRNO75882 1429 aa23.21■■□□□ 1.31
CPNE6-215ENST00000560356 SOS2Q07890 1332 aaPredicted RBP23.19■■□□□ 1.3
CPNE6-215ENST00000560356 FOXD1Q16676 465 aa23.18■■□□□ 1.3
CPNE6-215ENST00000560356 ZRANB1Q9UGI0 708 aa23.18■■□□□ 1.3
CPNE6-215ENST00000560356 FNBP4Q8N3X1 1017 aaPredicted RBP23.15■■□□□ 1.3
CPNE6-215ENST00000560356 ORAI2Q96SN7 254 aa23.15■■□□□ 1.3
CPNE6-215ENST00000560356 MYOM2P54296 1465 aa23.15■■□□□ 1.3
CPNE6-215ENST00000560356 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.14■■□□□ 1.3
CPNE6-215ENST00000560356 ROBO2Q9HCK4 1378 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms