RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 PHLPP1O60346 1717 aa26.15■■□□□ 1.78
HERC1-207ENST00000560316 JCADQ9P266 1359 aa26.14■■□□□ 1.78
HERC1-207ENST00000560316 ANKRD30AQ9BXX3 1397 aa26.11■■□□□ 1.77
HERC1-207ENST00000560316 SLC52A1Q9NWF4 448 aa26.1■■□□□ 1.77
HERC1-207ENST00000560316 FGD6Q6ZV73 1430 aa26.06■■□□□ 1.76
HERC1-207ENST00000560316 COL16A1Q07092 1604 aaPredicted RBP26.06■■□□□ 1.76
HERC1-207ENST00000560316 ZFYVE9O95405 1425 aa26.05■■□□□ 1.76
HERC1-207ENST00000560316 PLEKHG1Q9ULL1 1385 aa26.05■■□□□ 1.76
HERC1-207ENST00000560316 LRP6O75581 1613 aa26.04■■□□□ 1.76
HERC1-207ENST00000560316 PPP1R15AO75807 674 aaPredicted RBP26.04■■□□□ 1.76
HERC1-207ENST00000560316 CHD2O14647 1828 aaKnown RBP26.04■■□□□ 1.76
HERC1-207ENST00000560316 RIMS2Q9UQ26 1411 aa26.03■■□□□ 1.76
HERC1-207ENST00000560316 MEX3CQ5U5Q3 659 aaKnown RBP26.02■■□□□ 1.76
HERC1-207ENST00000560316 C14orf37Q86TY3 774 aa26.01■■□□□ 1.75
HERC1-207ENST00000560316 MYO5BQ9ULV0 1848 aa26.01■■□□□ 1.75
HERC1-207ENST00000560316 APLP2Q06481 763 aa26■■□□□ 1.75
HERC1-207ENST00000560316 TRIM52Q96A61 297 aa26■■□□□ 1.75
HERC1-207ENST00000560316 SPATA31A6Q5VVP1 1343 aa25.99■■□□□ 1.75
HERC1-207ENST00000560316 UPF1Q92900 1129 aaKnown RBP eCLIP25.99■■□□□ 1.75
HERC1-207ENST00000560316 HDGFP51858 240 aaKnown RBP25.98■■□□□ 1.75
HERC1-207ENST00000560316 TBX22Q9Y458 520 aa25.98■■□□□ 1.75
HERC1-207ENST00000560316 RPRD2Q5VT52 1461 aaKnown RBP25.98■■□□□ 1.75
HERC1-207ENST00000560316 GCC2Q8IWJ2 1684 aa25.97■■□□□ 1.75
HERC1-207ENST00000560316 ZNF772Q68DY9 489 aaPredicted RBP25.97■■□□□ 1.75
HERC1-207ENST00000560316 NUTM2DQ5VT03 806 aaPredicted RBP25.96■■□□□ 1.75
HERC1-207ENST00000560316 NCOA3Q9Y6Q9 1424 aa25.96■■□□□ 1.75
HERC1-207ENST00000560316 TMEM131LA2VDJ0 1609 aa25.96■■□□□ 1.75
HERC1-207ENST00000560316 CHGAP10645 457 aaKnown RBP25.95■■□□□ 1.74
HERC1-207ENST00000560316 ADGRL2O95490 1459 aa25.94■■□□□ 1.74
HERC1-207ENST00000560316 CADPS2Q86UW7 1296 aa25.93■■□□□ 1.74
HERC1-207ENST00000560316 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.92■■□□□ 1.74
HERC1-207ENST00000560316 ADAMTS13Q76LX8 1427 aa25.92■■□□□ 1.74
HERC1-207ENST00000560316 ANKRD50Q9ULJ7 1429 aa25.92■■□□□ 1.74
HERC1-207ENST00000560316 ATF3P18847 181 aa25.92■■□□□ 1.74
HERC1-207ENST00000560316 C19orf44Q9H6X5 657 aa25.92■■□□□ 1.74
HERC1-207ENST00000560316 AHDC1Q5TGY3 1603 aaPredicted RBP25.92■■□□□ 1.74
HERC1-207ENST00000560316 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.91■■□□□ 1.74
HERC1-207ENST00000560316 SHPRHQ149N8 1683 aa25.9■■□□□ 1.74
HERC1-207ENST00000560316 NUTM2BA6NNL0 878 aaPredicted RBP25.88■■□□□ 1.73
HERC1-207ENST00000560316 NUTM2EB1AL46 878 aaPredicted RBP25.88■■□□□ 1.73
HERC1-207ENST00000560316 RXRBP28702 533 aa25.88■■□□□ 1.73
HERC1-207ENST00000560316 FAM50AQ14320 339 aaKnown RBP25.88■■□□□ 1.73
HERC1-207ENST00000560316 NUTM2AQ8IVF1 878 aaPredicted RBP25.88■■□□□ 1.73
HERC1-207ENST00000560316 BRINP3Q76B58 766 aa25.86■■□□□ 1.73
HERC1-207ENST00000560316 DIP2AQ14689 1571 aa25.84■■□□□ 1.73
HERC1-207ENST00000560316 PIK3R4Q99570 1358 aa25.83■■□□□ 1.73
HERC1-207ENST00000560316 AMOTL2Q9Y2J4 779 aa25.83■■□□□ 1.73
HERC1-207ENST00000560316 PTPRUQ92729 1446 aa25.82■■□□□ 1.72
HERC1-207ENST00000560316 AFF2P51816 1311 aa25.8■■□□□ 1.72
HERC1-207ENST00000560316 E9PCH4 1651 aa25.79■■□□□ 1.72
HERC1-207ENST00000560316 TRPM2O94759 1503 aa25.78■■□□□ 1.72
HERC1-207ENST00000560316 CDK12Q9NYV4 1490 aaPredicted RBP25.78■■□□□ 1.72
HERC1-207ENST00000560316 UNC13BO14795 1591 aa25.78■■□□□ 1.72
HERC1-207ENST00000560316 ASXL1Q8IXJ9 1541 aa25.76■■□□□ 1.71
HERC1-207ENST00000560316 DCCP43146 1447 aa25.73■■□□□ 1.71
HERC1-207ENST00000560316 SETD5Q9C0A6 1442 aa25.73■■□□□ 1.71
HERC1-207ENST00000560316 MST1RQ04912 1400 aa25.71■■□□□ 1.71
HERC1-207ENST00000560316 DDX17Q92841 729 aaKnown RBP25.71■■□□□ 1.71
HERC1-207ENST00000560316 C8orf37Q96NL8 207 aa25.71■■□□□ 1.71
HERC1-207ENST00000560316 LRRC59Q96AG4 307 aaKnown RBP25.69■■□□□ 1.7
HERC1-207ENST00000560316 QTRT2Q9H974 415 aaKnown RBP25.69■■□□□ 1.7
HERC1-207ENST00000560316 RGS12O14924 1447 aa25.69■■□□□ 1.7
HERC1-207ENST00000560316 XRN1Q8IZH2 1706 aaKnown RBP25.68■■□□□ 1.7
HERC1-207ENST00000560316 NHSL1Q5SYE7 1610 aa25.68■■□□□ 1.7
HERC1-207ENST00000560316 IQGAP3Q86VI3 1631 aa25.68■■□□□ 1.7
HERC1-207ENST00000560316 NRXN3Q9Y4C0 1643 aa25.67■■□□□ 1.7
HERC1-207ENST00000560316 RBM6P78332 1123 aaKnown RBP25.65■■□□□ 1.7
HERC1-207ENST00000560316 NUP155O75694 1391 aa25.65■■□□□ 1.7
HERC1-207ENST00000560316 METP08581 1390 aa25.65■■□□□ 1.7
HERC1-207ENST00000560316 PNPLA6Q8IY17 1366 aa25.65■■□□□ 1.7
HERC1-207ENST00000560316 SETBP1Q9Y6X0 1596 aa25.63■■□□□ 1.69
HERC1-207ENST00000560316 ROCK1Q13464 1354 aa25.61■■□□□ 1.69
HERC1-207ENST00000560316 ZNF326Q5BKZ1 582 aaKnown RBP25.61■■□□□ 1.69
HERC1-207ENST00000560316 ADAMTS2O95450 1211 aa25.6■■□□□ 1.69
HERC1-207ENST00000560316 ADGRL3Q9HAR2 1447 aa25.6■■□□□ 1.69
HERC1-207ENST00000560316 SRCAPQ6ZRS2 3230 aa25.59■■□□□ 1.69
HERC1-207ENST00000560316 NGLY1Q96IV0 654 aa25.58■■□□□ 1.69
HERC1-207ENST00000560316 NALCNQ8IZF0 1738 aa25.55■■□□□ 1.68
HERC1-207ENST00000560316 C1orf167Q5SNV9 1468 aa25.53■■□□□ 1.68
HERC1-207ENST00000560316 ITGAEP38570 1179 aa25.53■■□□□ 1.68
HERC1-207ENST00000560316 SPHKAPQ2M3C7 1700 aa25.51■■□□□ 1.68
HERC1-207ENST00000560316 ATAD2Q6PL18 1390 aa25.5■■□□□ 1.67
HERC1-207ENST00000560316 USP21Q9UK80 565 aa25.5■■□□□ 1.67
HERC1-207ENST00000560316 ORAI2Q96SN7 254 aa25.49■■□□□ 1.67
HERC1-207ENST00000560316 NEXMIFQ5QGS0 1516 aa25.47■■□□□ 1.67
HERC1-207ENST00000560316 SOS2Q07890 1332 aaPredicted RBP25.47■■□□□ 1.67
HERC1-207ENST00000560316 TRPC5Q9UL62 973 aaPredicted RBP25.46■■□□□ 1.67
HERC1-207ENST00000560316 LAMC1P11047 1609 aa25.45■■□□□ 1.66
HERC1-207ENST00000560316 CLTCL1P53675 1640 aa25.44■■□□□ 1.66
HERC1-207ENST00000560316 FNBP4Q8N3X1 1017 aaPredicted RBP25.43■■□□□ 1.66
HERC1-207ENST00000560316 ROBO2Q9HCK4 1378 aa25.43■■□□□ 1.66
HERC1-207ENST00000560316 ATRNO75882 1429 aa25.41■■□□□ 1.66
HERC1-207ENST00000560316 PTCH1Q13635 1447 aa25.41■■□□□ 1.66
HERC1-207ENST00000560316 ZRANB1Q9UGI0 708 aa25.4■■□□□ 1.66
HERC1-207ENST00000560316 EP400Q96L91 3159 aa25.36■■□□□ 1.65
HERC1-207ENST00000560316 FOXD1Q16676 465 aa25.35■■□□□ 1.65
HERC1-207ENST00000560316 COL22A1Q8NFW1 1626 aaPredicted RBP25.34■■□□□ 1.65
HERC1-207ENST00000560316 KIF1BO60333 1816 aa25.33■■□□□ 1.65
HERC1-207ENST00000560316 VGFO15240 615 aaPredicted RBP25.33■■□□□ 1.65
HERC1-207ENST00000560316 MYOM2P54296 1465 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms