RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 TXNDC2Q86VQ3 553 aa17.58■□□□□ 0.4
RABGGTA-215ENST00000560207 IQGAP1P46940 1657 aa17.58■□□□□ 0.4
RABGGTA-215ENST00000560207 ZFYVE9O95405 1425 aa17.56■□□□□ 0.4
RABGGTA-215ENST00000560207 RIMS2Q9UQ26 1411 aa17.56■□□□□ 0.4
RABGGTA-215ENST00000560207 DHX57Q6P158 1386 aaKnown RBP17.56■□□□□ 0.4
RABGGTA-215ENST00000560207 ZNF326Q5BKZ1 582 aaKnown RBP17.56■□□□□ 0.4
RABGGTA-215ENST00000560207 PPLO60437 1756 aa17.56■□□□□ 0.4
RABGGTA-215ENST00000560207 VGFO15240 615 aaPredicted RBP17.55■□□□□ 0.4
RABGGTA-215ENST00000560207 NPHP4O75161 1426 aaPredicted RBP17.55■□□□□ 0.4
RABGGTA-215ENST00000560207 SPATA31E1Q6ZUB1 1445 aa17.55■□□□□ 0.4
RABGGTA-215ENST00000560207 CLSPNQ9HAW4 1339 aa17.54■□□□□ 0.4
RABGGTA-215ENST00000560207 PPP1R15AO75807 674 aaPredicted RBP17.54■□□□□ 0.4
RABGGTA-215ENST00000560207 NCKAP5LQ9HCH0 1330 aa17.53■□□□□ 0.4
RABGGTA-215ENST00000560207 IFT172Q9UG01 1749 aa17.53■□□□□ 0.4
RABGGTA-215ENST00000560207 PLEKHG1Q9ULL1 1385 aa17.53■□□□□ 0.4
RABGGTA-215ENST00000560207 NEXMIFQ5QGS0 1516 aa17.52■□□□□ 0.4
RABGGTA-215ENST00000560207 DIP2AQ14689 1571 aa17.51■□□□□ 0.39
RABGGTA-215ENST00000560207 LTKP29376 864 aa17.5■□□□□ 0.39
RABGGTA-215ENST00000560207 SETBP1Q9Y6X0 1596 aa17.47■□□□□ 0.39
RABGGTA-215ENST00000560207 MYOM2P54296 1465 aa17.46■□□□□ 0.39
RABGGTA-215ENST00000560207 PIK3R4Q99570 1358 aa17.46■□□□□ 0.39
RABGGTA-215ENST00000560207 BCANQ96GW7 911 aa17.46■□□□□ 0.39
RABGGTA-215ENST00000560207 TBX22Q9Y458 520 aa17.46■□□□□ 0.39
RABGGTA-215ENST00000560207 RGL3Q3MIN7 710 aa17.45■□□□□ 0.38
RABGGTA-215ENST00000560207 LAMC1P11047 1609 aa17.44■□□□□ 0.38
RABGGTA-215ENST00000560207 CHD2O14647 1828 aaKnown RBP17.42■□□□□ 0.38
RABGGTA-215ENST00000560207 TIMELESSQ9UNS1 1208 aa17.41■□□□□ 0.38
RABGGTA-215ENST00000560207 CPS1P31327 1500 aa17.41■□□□□ 0.38
RABGGTA-215ENST00000560207 NRXN1Q9ULB1 1477 aa17.4■□□□□ 0.38
RABGGTA-215ENST00000560207 NRXN3Q9Y4C0 1643 aa17.39■□□□□ 0.38
RABGGTA-215ENST00000560207 DCAF11Q8TEB1 546 aa17.38■□□□□ 0.37
RABGGTA-215ENST00000560207 KIAA1210Q9ULL0 1709 aa17.38■□□□□ 0.37
RABGGTA-215ENST00000560207 PIK3C2GO75747 1445 aa17.38■□□□□ 0.37
RABGGTA-215ENST00000560207 ADAMTS13Q76LX8 1427 aa17.38■□□□□ 0.37
RABGGTA-215ENST00000560207 CCER1Q8TC90 406 aaPredicted RBP17.37■□□□□ 0.37
RABGGTA-215ENST00000560207 IQSEC2Q5JU85 1478 aa17.37■□□□□ 0.37
RABGGTA-215ENST00000560207 NWD1Q149M9 1564 aa17.36■□□□□ 0.37
RABGGTA-215ENST00000560207 ALKQ9UM73 1620 aa17.36■□□□□ 0.37
RABGGTA-215ENST00000560207 KCNA6P17658 529 aa17.36■□□□□ 0.37
RABGGTA-215ENST00000560207 NUTM2DQ5VT03 806 aaPredicted RBP17.36■□□□□ 0.37
RABGGTA-215ENST00000560207 SLC26A8Q96RN1 970 aa17.36■□□□□ 0.37
RABGGTA-215ENST00000560207 TONSLQ96HA7 1378 aa17.36■□□□□ 0.37
RABGGTA-215ENST00000560207 NKTRP30414 1462 aaKnown RBP17.36■□□□□ 0.37
RABGGTA-215ENST00000560207 SETD1AO15047 1707 aaKnown RBP17.35■□□□□ 0.37
RABGGTA-215ENST00000560207 NEUROD1Q13562 356 aa17.35■□□□□ 0.37
RABGGTA-215ENST00000560207 SIN3AQ96ST3 1273 aa17.35■□□□□ 0.37
RABGGTA-215ENST00000560207 ADGRF5Q8IZF2 1346 aa17.34■□□□□ 0.37
RABGGTA-215ENST00000560207 LTBP4Q8N2S1 1624 aa17.33■□□□□ 0.37
RABGGTA-215ENST00000560207 C14orf93Q9H972 538 aaKnown RBP17.33■□□□□ 0.36
RABGGTA-215ENST00000560207 PRAG1Q86YV5 1406 aa17.31■□□□□ 0.36
RABGGTA-215ENST00000560207 NCOA3Q9Y6Q9 1424 aa17.31■□□□□ 0.36
RABGGTA-215ENST00000560207 ZNF335Q9H4Z2 1342 aaPredicted RBP17.31■□□□□ 0.36
RABGGTA-215ENST00000560207 L3MBTL2Q969R5 705 aa17.31■□□□□ 0.36
RABGGTA-215ENST00000560207 KDM2AQ9Y2K7 1162 aa17.31■□□□□ 0.36
RABGGTA-215ENST00000560207 STRCP1A6NGW2 1772 aa17.3■□□□□ 0.36
RABGGTA-215ENST00000560207 XRN1Q8IZH2 1706 aaKnown RBP17.3■□□□□ 0.36
RABGGTA-215ENST00000560207 KNDC1Q76NI1 1749 aa17.29■□□□□ 0.36
RABGGTA-215ENST00000560207 AMOTL2Q9Y2J4 779 aa17.27■□□□□ 0.36
RABGGTA-215ENST00000560207 METP08581 1390 aa17.27■□□□□ 0.35
RABGGTA-215ENST00000560207 ILDR1Q86SU0 546 aaPredicted RBP17.26■□□□□ 0.35
RABGGTA-215ENST00000560207 CERKQ8TCT0 537 aa17.26■□□□□ 0.35
RABGGTA-215ENST00000560207 SIRT1Q96EB6 747 aa17.26■□□□□ 0.35
RABGGTA-215ENST00000560207 TECPR2O15040 1411 aa17.25■□□□□ 0.35
RABGGTA-215ENST00000560207 PTCH1Q13635 1447 aa17.25■□□□□ 0.35
RABGGTA-215ENST00000560207 PROSER2Q86WR7 435 aaPredicted RBP17.25■□□□□ 0.35
RABGGTA-215ENST00000560207 LRPPRCP42704 1394 aaKnown RBP17.25■□□□□ 0.35
RABGGTA-215ENST00000560207 ABCC11Q96J66 1382 aa17.25■□□□□ 0.35
RABGGTA-215ENST00000560207 LRRC7Q96NW7 1537 aa17.24■□□□□ 0.35
RABGGTA-215ENST00000560207 YTHDC2Q9H6S0 1430 aaKnown RBP17.23■□□□□ 0.35
RABGGTA-215ENST00000560207 TRPM1Q7Z4N2 1603 aa17.23■□□□□ 0.35
RABGGTA-215ENST00000560207 CFAP70Q5T0N1 1121 aa17.23■□□□□ 0.35
RABGGTA-215ENST00000560207 XIRP1Q702N8 1843 aaKnown RBP17.23■□□□□ 0.35
RABGGTA-215ENST00000560207 PTPRUQ92729 1446 aa17.21■□□□□ 0.35
RABGGTA-215ENST00000560207 DLC1Q96QB1 1528 aa17.21■□□□□ 0.35
RABGGTA-215ENST00000560207 ADGRB1O14514 1584 aa17.21■□□□□ 0.35
RABGGTA-215ENST00000560207 FAM135BQ49AJ0 1406 aa17.21■□□□□ 0.34
RABGGTA-215ENST00000560207 SENP3Q9H4L4 574 aaPredicted RBP17.2■□□□□ 0.34
RABGGTA-215ENST00000560207 ASXL1Q8IXJ9 1541 aa17.19■□□□□ 0.34
RABGGTA-215ENST00000560207 MSH6P52701 1360 aa17.18■□□□□ 0.34
RABGGTA-215ENST00000560207 TMEM94Q12767 1356 aa17.18■□□□□ 0.34
RABGGTA-215ENST00000560207 DCCP43146 1447 aa17.17■□□□□ 0.34
RABGGTA-215ENST00000560207 TMEM132EQ6IEE7 984 aa17.17■□□□□ 0.34
RABGGTA-215ENST00000560207 C19orf44Q9H6X5 657 aa17.17■□□□□ 0.34
RABGGTA-215ENST00000560207 TOM1O60784 492 aa17.16■□□□□ 0.34
RABGGTA-215ENST00000560207 RALGAPBQ86X10 1494 aa17.16■□□□□ 0.34
RABGGTA-215ENST00000560207 C14orf37Q86TY3 774 aa17.15■□□□□ 0.34
RABGGTA-215ENST00000560207 ARHGEF28Q8N1W1 1705 aaKnown RBP17.15■□□□□ 0.34
RABGGTA-215ENST00000560207 ROCK2O75116 1388 aaKnown RBP17.15■□□□□ 0.34
RABGGTA-215ENST00000560207 EIF3AQ14152 1382 aaKnown RBP17.15■□□□□ 0.34
RABGGTA-215ENST00000560207 GPRASP1Q5JY77 1395 aa17.15■□□□□ 0.34
RABGGTA-215ENST00000560207 CADPS2Q86UW7 1296 aa17.14■□□□□ 0.33
RABGGTA-215ENST00000560207 STK26Q9P289 416 aa17.14■□□□□ 0.33
RABGGTA-215ENST00000560207 ADGRL3Q9HAR2 1447 aa17.13■□□□□ 0.33
RABGGTA-215ENST00000560207 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.13■□□□□ 0.33
RABGGTA-215ENST00000560207 SLC24A1O60721 1099 aa17.13■□□□□ 0.33
RABGGTA-215ENST00000560207 ROBO2Q9HCK4 1378 aa17.13■□□□□ 0.33
RABGGTA-215ENST00000560207 ATF3P18847 181 aa17.12■□□□□ 0.33
RABGGTA-215ENST00000560207 POGKQ9P215 609 aa17.12■□□□□ 0.33
RABGGTA-215ENST00000560207 NALCNQ8IZF0 1738 aa17.11■□□□□ 0.33
RABGGTA-215ENST00000560207 NBPF8Q3BBV2 869 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms