RNA–Protein interactions for RNA: ENST00000560176.1

AC012409.1-201, humanhuman

TSL 3 BASIC

Gene AC012409.1, Length 358 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012409.1-201ENST00000560176 CALRP27797 417 aaKnown RBP6.06□□□□□ -1.44
AC012409.1-201ENST00000560176 E2F4Q16254 413 aa6.06□□□□□ -1.44
AC012409.1-201ENST00000560176 MAMSTRQ6ZN01 415 aa6.06□□□□□ -1.44
AC012409.1-201ENST00000560176 PCMTD1Q96MG8 357 aaPredicted RBP6.06□□□□□ -1.44
AC012409.1-201ENST00000560176 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.06□□□□□ -1.44
AC012409.1-201ENST00000560176 ZNF330Q9Y3S2 320 aaPredicted RBP6.06□□□□□ -1.44
AC012409.1-201ENST00000560176 CARNS1A5YM72 827 aa6.05□□□□□ -1.44
AC012409.1-201ENST00000560176 ANP32CO43423 234 aa6.05□□□□□ -1.44
AC012409.1-201ENST00000560176 TBC1D12O60347 775 aa6.05□□□□□ -1.44
AC012409.1-201ENST00000560176 CSB-PGBD3P0DP91 1061 aa6.05□□□□□ -1.44
AC012409.1-201ENST00000560176 CACTIN-AS1Q8N1I8 211 aa6.05□□□□□ -1.44
AC012409.1-201ENST00000560176 LARGE2Q8N3Y3 721 aa6.05□□□□□ -1.44
AC012409.1-201ENST00000560176 YTHDC1Q96MU7 727 aaKnown RBP6.05□□□□□ -1.44
AC012409.1-201ENST00000560176 SPOCK3Q9BQ16 436 aa6.05□□□□□ -1.44
AC012409.1-201ENST00000560176 SMARCA2P51531 1590 aa6.05□□□□□ -1.44
AC012409.1-201ENST00000560176 TTC36A6NLP5 189 aa6.04□□□□□ -1.44
AC012409.1-201ENST00000560176 U2SURPO15042 1029 aaKnown RBP6.04□□□□□ -1.44
AC012409.1-201ENST00000560176 IGBP1P78318 339 aa6.04□□□□□ -1.44
AC012409.1-201ENST00000560176 PSME1Q06323 249 aa6.04□□□□□ -1.44
AC012409.1-201ENST00000560176 NOP9Q86U38 636 aaKnown RBP6.04□□□□□ -1.44
AC012409.1-201ENST00000560176 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.04□□□□□ -1.44
AC012409.1-201ENST00000560176 STAG3Q9UJ98 1225 aa6.04□□□□□ -1.44
AC012409.1-201ENST00000560176 FAN1Q9Y2M0 1017 aa6.04□□□□□ -1.44
AC012409.1-201ENST00000560176 COG6Q9Y2V7 657 aa6.04□□□□□ -1.44
AC012409.1-201ENST00000560176 STK24Q9Y6E0 443 aa6.04□□□□□ -1.44
AC012409.1-201ENST00000560176 HMGXB3Q12766 1538 aa6.04□□□□□ -1.44
AC012409.1-201ENST00000560176 CCDC88BA6NC98 1476 aa6.03□□□□□ -1.44
AC012409.1-201ENST00000560176 KIF4AO95239 1232 aa6.03□□□□□ -1.44
AC012409.1-201ENST00000560176 CASC1Q6TDU7 716 aa6.03□□□□□ -1.44
AC012409.1-201ENST00000560176 NBPF11Q86T75 865 aa6.03□□□□□ -1.44
AC012409.1-201ENST00000560176 CCER1Q8TC90 406 aaPredicted RBP6.03□□□□□ -1.44
AC012409.1-201ENST00000560176 PBXIP1Q96AQ6 731 aa6.03□□□□□ -1.44
AC012409.1-201ENST00000560176 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.03□□□□□ -1.44
AC012409.1-201ENST00000560176 TMA7Q9Y2S6 64 aaKnown RBP6.03□□□□□ -1.44
AC012409.1-201ENST00000560176 CC2D2AQ9P2K1 1620 aa6.03□□□□□ -1.44
AC012409.1-201ENST00000560176 hCG_2014768A0A024R1R8 64 aa6.02□□□□□ -1.45
AC012409.1-201ENST00000560176 VGFO15240 615 aaPredicted RBP6.02□□□□□ -1.45
AC012409.1-201ENST00000560176 HOXD11P31277 338 aaPredicted RBP6.02□□□□□ -1.45
AC012409.1-201ENST00000560176 PTPROQ16827 1216 aa6.02□□□□□ -1.45
AC012409.1-201ENST00000560176 CCDC96Q2M329 555 aa6.02□□□□□ -1.45
AC012409.1-201ENST00000560176 HSP90AB2PQ58FF8 381 aa6.02□□□□□ -1.45
AC012409.1-201ENST00000560176 DNAJC14Q6Y2X3 702 aaPredicted RBP6.02□□□□□ -1.45
AC012409.1-201ENST00000560176 JADE2Q9NQC1 790 aa6.02□□□□□ -1.45
AC012409.1-201ENST00000560176 MMP14P50281 582 aa6.01□□□□□ -1.45
AC012409.1-201ENST00000560176 NBPF1Q3BBV0 1214 aa6.01□□□□□ -1.45
AC012409.1-201ENST00000560176 C4orf46Q504U0 113 aa6.01□□□□□ -1.45
AC012409.1-201ENST00000560176 AXDND1Q5T1B0 1012 aaPredicted RBP6.01□□□□□ -1.45
AC012409.1-201ENST00000560176 PARP9Q8IXQ6 854 aa6.01□□□□□ -1.45
AC012409.1-201ENST00000560176 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.01□□□□□ -1.45
AC012409.1-201ENST00000560176 KCNB2Q92953 911 aa6.01□□□□□ -1.45
AC012409.1-201ENST00000560176 CALR3Q96L12 384 aaKnown RBP6.01□□□□□ -1.45
AC012409.1-201ENST00000560176 CHPF2Q9P2E5 772 aa6.01□□□□□ -1.45
AC012409.1-201ENST00000560176 COMMD10Q9Y6G5 202 aa6.01□□□□□ -1.45
AC012409.1-201ENST00000560176 TLDC2A0PJX2 215 aa6□□□□□ -1.45
AC012409.1-201ENST00000560176 SSFA2P28290 1259 aa6□□□□□ -1.45
AC012409.1-201ENST00000560176 GTF2E1P29083 439 aaPredicted RBP6□□□□□ -1.45
AC012409.1-201ENST00000560176 EGFLAMQ63HQ2 1017 aa6□□□□□ -1.45
AC012409.1-201ENST00000560176 MIER1Q8N108 512 aa6□□□□□ -1.45
AC012409.1-201ENST00000560176 CXorf38Q8TB03 319 aa6□□□□□ -1.45
AC012409.1-201ENST00000560176 CCDC85AQ96PX6 553 aaPredicted RBP6□□□□□ -1.45
AC012409.1-201ENST00000560176 BCL2L13Q9BXK5 485 aa6□□□□□ -1.45
AC012409.1-201ENST00000560176 GNL3LQ9NVN8 582 aaKnown RBP6□□□□□ -1.45
AC012409.1-201ENST00000560176 GNEQ9Y223 722 aaKnown RBP6□□□□□ -1.45
AC012409.1-201ENST00000560176 EPB41L2O43491 1005 aaKnown RBP5.99□□□□□ -1.45
AC012409.1-201ENST00000560176 NRDCO43847 1150 aa5.99□□□□□ -1.45
AC012409.1-201ENST00000560176 CDCA8Q53HL2 280 aa5.99□□□□□ -1.45
AC012409.1-201ENST00000560176 PNISRQ8TF01 805 aaKnown RBP5.99□□□□□ -1.45
AC012409.1-201ENST00000560176 TBC1D2Q9BYX2 928 aa5.99□□□□□ -1.45
AC012409.1-201ENST00000560176 VRTNQ9H8Y1 702 aa5.99□□□□□ -1.45
AC012409.1-201ENST00000560176 GABBR1Q9UBS5 961 aa5.99□□□□□ -1.45
AC012409.1-201ENST00000560176 BAZ1BQ9UIG0 1483 aaKnown RBP5.98□□□□□ -1.45
AC012409.1-201ENST00000560176 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.98□□□□□ -1.45
AC012409.1-201ENST00000560176 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.98□□□□□ -1.45
AC012409.1-201ENST00000560176 WDHD1O75717 1129 aaPredicted RBP5.98□□□□□ -1.45
AC012409.1-201ENST00000560176 ZRANB2O95218 330 aaKnown RBP eCLIP5.98□□□□□ -1.45
AC012409.1-201ENST00000560176 BDNFP23560 247 aa5.98□□□□□ -1.45
AC012409.1-201ENST00000560176 RHBDL3P58872 404 aa5.98□□□□□ -1.45
AC012409.1-201ENST00000560176 PPP4CP60510 307 aa5.98□□□□□ -1.45
AC012409.1-201ENST00000560176 PDAP1Q13442 181 aaKnown RBP5.98□□□□□ -1.45
AC012409.1-201ENST00000560176 CNGB1Q14028 1251 aaPredicted RBP5.98□□□□□ -1.45
AC012409.1-201ENST00000560176 HNRNPUL2Q1KMD3 747 aaKnown RBP5.98□□□□□ -1.45
AC012409.1-201ENST00000560176 C11orf96Q7Z7L8 435 aa5.98□□□□□ -1.45
AC012409.1-201ENST00000560176 AMOTL1Q8IY63 956 aa5.98□□□□□ -1.45
AC012409.1-201ENST00000560176 GIPC2Q8TF65 315 aa5.98□□□□□ -1.45
AC012409.1-201ENST00000560176 SPACA7Q96KW9 195 aa5.98□□□□□ -1.45
AC012409.1-201ENST00000560176 TSPAN18Q96SJ8 248 aa5.98□□□□□ -1.45
AC012409.1-201ENST00000560176 SENP7Q9BQF6 1050 aa5.98□□□□□ -1.45
AC012409.1-201ENST00000560176 LNPKQ9C0E8 428 aa5.98□□□□□ -1.45
AC012409.1-201ENST00000560176 ZNF500O60304 480 aaPredicted RBP5.97□□□□□ -1.45
AC012409.1-201ENST00000560176 VAMP1P23763 118 aa5.97□□□□□ -1.45
AC012409.1-201ENST00000560176 GYS2P54840 703 aa5.97□□□□□ -1.45
AC012409.1-201ENST00000560176 AMHR2Q16671 573 aa5.97□□□□□ -1.45
AC012409.1-201ENST00000560176 NBPF20Q3BBV1 942 aa5.97□□□□□ -1.45
AC012409.1-201ENST00000560176 NOM1Q5C9Z4 860 aaKnown RBP5.97□□□□□ -1.45
AC012409.1-201ENST00000560176 SDE2Q6IQ49 451 aa5.97□□□□□ -1.45
AC012409.1-201ENST00000560176 ZNF280DQ6N043 979 aa5.97□□□□□ -1.45
AC012409.1-201ENST00000560176 ARHGEF10LQ9HCE6 1279 aa5.97□□□□□ -1.45
AC012409.1-201ENST00000560176 NUB1Q9Y5A7 615 aa5.97□□□□□ -1.45
AC012409.1-201ENST00000560176 SPDYE2BA6NHP3 402 aa5.96□□□□□ -1.46
AC012409.1-201ENST00000560176 SPDYE5A6NIY4 337 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms