RNA–Protein interactions for RNA: ENST00000560047.1

CRTC3-207, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-207ENST00000560047 LRCH3Q96II8 777 aa13.98□□□□□ -0.17
CRTC3-207ENST00000560047 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.98□□□□□ -0.17
CRTC3-207ENST00000560047 SLC4A3P48751 1232 aa13.97□□□□□ -0.17
CRTC3-207ENST00000560047 AMHR2Q16671 573 aa13.96□□□□□ -0.17
CRTC3-207ENST00000560047 DAXXQ9UER7 740 aaPredicted RBP13.96□□□□□ -0.17
CRTC3-207ENST00000560047 DCAF1Q9Y4B6 1507 aa13.95□□□□□ -0.18
CRTC3-207ENST00000560047 SOWAHBA6NEL2 793 aa13.95□□□□□ -0.18
CRTC3-207ENST00000560047 MMRN1Q13201 1228 aa13.95□□□□□ -0.18
CRTC3-207ENST00000560047 NLRP7Q8WX94 980 aa13.95□□□□□ -0.18
CRTC3-207ENST00000560047 RNF166Q96A37 237 aaPredicted RBP13.95□□□□□ -0.18
CRTC3-207ENST00000560047 NACADO15069 1562 aa13.95□□□□□ -0.18
CRTC3-207ENST00000560047 CLCN1P35523 988 aa13.94□□□□□ -0.18
CRTC3-207ENST00000560047 MDM2Q00987 491 aaPredicted RBP13.94□□□□□ -0.18
CRTC3-207ENST00000560047 SLF2Q8IX21 1173 aa13.93□□□□□ -0.18
CRTC3-207ENST00000560047 BCAMP50895 628 aa13.92□□□□□ -0.18
CRTC3-207ENST00000560047 THSD4Q6ZMP0 1018 aa13.92□□□□□ -0.18
CRTC3-207ENST00000560047 MYO15BQ96JP2 1530 aa13.91□□□□□ -0.18
CRTC3-207ENST00000560047 TTLL12Q14166 644 aaPredicted RBP13.91□□□□□ -0.18
CRTC3-207ENST00000560047 GPCPD1Q9NPB8 672 aa13.91□□□□□ -0.18
CRTC3-207ENST00000560047 RB1CC1Q8TDY2 1594 aa13.91□□□□□ -0.18
CRTC3-207ENST00000560047 PDE4DQ08499 809 aa13.9□□□□□ -0.18
CRTC3-207ENST00000560047 RNF40O75150 1001 aa13.89□□□□□ -0.19
CRTC3-207ENST00000560047 RSPH4AQ5TD94 716 aa13.89□□□□□ -0.19
CRTC3-207ENST00000560047 NECTIN2Q92692 538 aa13.89□□□□□ -0.19
CRTC3-207ENST00000560047 PPP4CP60510 307 aa13.88□□□□□ -0.19
CRTC3-207ENST00000560047 SULF1Q8IWU6 871 aa13.88□□□□□ -0.19
CRTC3-207ENST00000560047 TMUB1Q9BVT8 246 aa13.88□□□□□ -0.19
CRTC3-207ENST00000560047 TSR3Q9UJK0 312 aaKnown RBP13.88□□□□□ -0.19
CRTC3-207ENST00000560047 HPS5Q9UPZ3 1129 aa13.88□□□□□ -0.19
CRTC3-207ENST00000560047 DDX11L8A8MPP1 907 aa13.85□□□□□ -0.19
CRTC3-207ENST00000560047 PTPN5P54829 565 aa13.85□□□□□ -0.19
CRTC3-207ENST00000560047 REPIN1Q9BWE0 567 aaKnown RBP13.85□□□□□ -0.19
CRTC3-207ENST00000560047 PARP9Q8IXQ6 854 aa13.84□□□□□ -0.19
CRTC3-207ENST00000560047 HCSTQ9UBK5 93 aa13.84□□□□□ -0.19
CRTC3-207ENST00000560047 FAM217BQ9NTX9 383 aaPredicted RBP13.83□□□□□ -0.2
CRTC3-207ENST00000560047 GIGYF2Q6Y7W6 1299 aaKnown RBP13.82□□□□□ -0.2
CRTC3-207ENST00000560047 WBP1LQ9NX94 342 aa13.82□□□□□ -0.2
CRTC3-207ENST00000560047 SSTR3P32745 418 aaPredicted RBP13.81□□□□□ -0.2
CRTC3-207ENST00000560047 RDH13Q8NBN7 331 aa13.81□□□□□ -0.2
CRTC3-207ENST00000560047 SLC10A3P09131 477 aa13.8□□□□□ -0.2
CRTC3-207ENST00000560047 NYAP1Q6ZVC0 841 aa13.8□□□□□ -0.2
CRTC3-207ENST00000560047 PRR14Q9BWN1 585 aa13.77□□□□□ -0.21
CRTC3-207ENST00000560047 PLSCR2Q9NRY7 297 aa13.77□□□□□ -0.21
CRTC3-207ENST00000560047 CD46P15529 392 aa13.76□□□□□ -0.21
CRTC3-207ENST00000560047 NEUROD2Q15784 382 aa13.76□□□□□ -0.21
CRTC3-207ENST00000560047 KMT5BQ4FZB7 885 aa13.75□□□□□ -0.21
CRTC3-207ENST00000560047 CFHP08603 1231 aa13.74□□□□□ -0.21
CRTC3-207ENST00000560047 GCGRP47871 477 aa13.74□□□□□ -0.21
CRTC3-207ENST00000560047 KDM4CQ9H3R0 1056 aa13.74□□□□□ -0.21
CRTC3-207ENST00000560047 GPBP1L1Q9HC44 474 aaPredicted RBP13.74□□□□□ -0.21
CRTC3-207ENST00000560047 MS4A1P11836 297 aa13.72□□□□□ -0.21
CRTC3-207ENST00000560047 APLP1P51693 650 aa13.72□□□□□ -0.21
CRTC3-207ENST00000560047 BRPF1P55201 1214 aaPredicted RBP13.72□□□□□ -0.21
CRTC3-207ENST00000560047 BEGAINQ9BUH8 593 aa13.7□□□□□ -0.22
CRTC3-207ENST00000560047 ACTN4O43707 911 aaKnown RBP13.69□□□□□ -0.22
CRTC3-207ENST00000560047 KDM4AO75164 1064 aa13.66□□□□□ -0.22
CRTC3-207ENST00000560047 NUTM1Q86Y26 1132 aa13.66□□□□□ -0.22
CRTC3-207ENST00000560047 SCRIBQ14160 1630 aa13.64□□□□□ -0.23
CRTC3-207ENST00000560047 USP46P62068 366 aa13.64□□□□□ -0.23
CRTC3-207ENST00000560047 GRIPAP1Q4V328 841 aa13.64□□□□□ -0.23
CRTC3-207ENST00000560047 PCDHB3Q9Y5E6 796 aa13.64□□□□□ -0.23
CRTC3-207ENST00000560047 FUT2Q10981 343 aa13.63□□□□□ -0.23
CRTC3-207ENST00000560047 DIXDC1Q155Q3 683 aa13.63□□□□□ -0.23
CRTC3-207ENST00000560047 DDRGK1Q96HY6 314 aa13.63□□□□□ -0.23
CRTC3-207ENST00000560047 ATP6V1AP38606 617 aa13.62□□□□□ -0.23
CRTC3-207ENST00000560047 FAM117AQ9C073 453 aa13.62□□□□□ -0.23
CRTC3-207ENST00000560047 SHROOM4Q9ULL8 1493 aa13.61□□□□□ -0.23
CRTC3-207ENST00000560047 SPIRE2Q8WWL2 714 aa13.6□□□□□ -0.23
CRTC3-207ENST00000560047 UNC13AQ9UPW8 1703 aa13.59□□□□□ -0.23
CRTC3-207ENST00000560047 TBC1D2Q9BYX2 928 aa13.58□□□□□ -0.24
CRTC3-207ENST00000560047 NR1I2O75469 434 aa13.57□□□□□ -0.24
CRTC3-207ENST00000560047 PUS10Q3MIT2 529 aaKnown RBP13.57□□□□□ -0.24
CRTC3-207ENST00000560047 MTRQ99707 1265 aa13.57□□□□□ -0.24
CRTC3-207ENST00000560047 RSPH6AQ9H0K4 717 aa13.57□□□□□ -0.24
CRTC3-207ENST00000560047 IL21Q9HBE4 155 aa13.57□□□□□ -0.24
CRTC3-207ENST00000560047 COPS2P61201 443 aa13.56□□□□□ -0.24
CRTC3-207ENST00000560047 TJAP1Q5JTD0 557 aa13.56□□□□□ -0.24
CRTC3-207ENST00000560047 MORN1Q5T089 497 aa13.56□□□□□ -0.24
CRTC3-207ENST00000560047 BLOC1S3Q6QNY0 202 aa13.56□□□□□ -0.24
CRTC3-207ENST00000560047 IL27Q8NEV9 243 aa13.56□□□□□ -0.24
CRTC3-207ENST00000560047 HOXA2O43364 376 aa13.55□□□□□ -0.24
CRTC3-207ENST00000560047 SCUBE3Q8IX30 993 aa13.54□□□□□ -0.24
CRTC3-207ENST00000560047 PLEKHG3A1L390 1219 aa13.53□□□□□ -0.24
CRTC3-207ENST00000560047 ITGBL1O95965 494 aaPredicted RBP13.53□□□□□ -0.24
CRTC3-207ENST00000560047 KCNC4Q03721 635 aa13.53□□□□□ -0.24
CRTC3-207ENST00000560047 BICRAQ9NZM4 1560 aa13.53□□□□□ -0.24
CRTC3-207ENST00000560047 MOXD2PA6NHM9 499 aa13.51□□□□□ -0.25
CRTC3-207ENST00000560047 SLC27A5Q9Y2P5 690 aa13.51□□□□□ -0.25
CRTC3-207ENST00000560047 ZPR1O75312 459 aa13.5□□□□□ -0.25
CRTC3-207ENST00000560047 GJA5P36382 358 aa13.5□□□□□ -0.25
CRTC3-207ENST00000560047 MYSM1Q5VVJ2 828 aa13.5□□□□□ -0.25
CRTC3-207ENST00000560047 ZNF516Q92618 1163 aa13.5□□□□□ -0.25
CRTC3-207ENST00000560047 FDX1P10109 184 aa13.49□□□□□ -0.25
CRTC3-207ENST00000560047 NDUFV2P19404 249 aa13.49□□□□□ -0.25
CRTC3-207ENST00000560047 Q3C1V9 767 aa13.48□□□□□ -0.25
CRTC3-207ENST00000560047 RIC3Q7Z5B4 369 aa13.48□□□□□ -0.25
CRTC3-207ENST00000560047 HLA-CQ95604 372 aa13.48□□□□□ -0.25
CRTC3-207ENST00000560047 SPTLC1O15269 473 aa13.47□□□□□ -0.25
CRTC3-207ENST00000560047 PLA2G2EQ9NZK7 142 aa13.47□□□□□ -0.25
CRTC3-207ENST00000560047 SALL2Q9Y467 1007 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms