RNA–Protein interactions for RNA: ENST00000560004.5

RORA-212, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-212ENST00000560004 NRXN3Q9Y4C0 1643 aa16.63■□□□□ 0.25
RORA-212ENST00000560004 CHGAP10645 457 aaKnown RBP16.63■□□□□ 0.25
RORA-212ENST00000560004 NEUROD1Q13562 356 aa16.63■□□□□ 0.25
RORA-212ENST00000560004 NRXN1Q9ULB1 1477 aa16.62■□□□□ 0.25
RORA-212ENST00000560004 IQGAP1P46940 1657 aa16.62■□□□□ 0.25
RORA-212ENST00000560004 SETD1AO15047 1707 aaKnown RBP16.61■□□□□ 0.25
RORA-212ENST00000560004 SCAF11Q99590 1463 aaKnown RBP16.61■□□□□ 0.25
RORA-212ENST00000560004 STAG3Q9UJ98 1225 aa16.6■□□□□ 0.25
RORA-212ENST00000560004 RGL3Q3MIN7 710 aa16.59■□□□□ 0.25
RORA-212ENST00000560004 SETBP1Q9Y6X0 1596 aa16.59■□□□□ 0.25
RORA-212ENST00000560004 HSPA2P54652 639 aa16.58■□□□□ 0.24
RORA-212ENST00000560004 THEMISQ8N1K5 641 aaPredicted RBP16.58■□□□□ 0.24
RORA-212ENST00000560004 RPGRIP1LQ68CZ1 1315 aa16.58■□□□□ 0.24
RORA-212ENST00000560004 TONSLQ96HA7 1378 aa16.58■□□□□ 0.24
RORA-212ENST00000560004 MED14O60244 1454 aa16.57■□□□□ 0.24
RORA-212ENST00000560004 PIK3C2GO75747 1445 aa16.57■□□□□ 0.24
RORA-212ENST00000560004 ZNF326Q5BKZ1 582 aaKnown RBP16.57■□□□□ 0.24
RORA-212ENST00000560004 L3MBTL2Q969R5 705 aa16.57■□□□□ 0.24
RORA-212ENST00000560004 LTKP29376 864 aa16.56■□□□□ 0.24
RORA-212ENST00000560004 PRAG1Q86YV5 1406 aa16.55■□□□□ 0.24
RORA-212ENST00000560004 LAMC1P11047 1609 aa16.55■□□□□ 0.24
RORA-212ENST00000560004 TRPM1Q7Z4N2 1603 aa16.55■□□□□ 0.24
RORA-212ENST00000560004 ASXL1Q8IXJ9 1541 aa16.55■□□□□ 0.24
RORA-212ENST00000560004 PLEKHG1Q9ULL1 1385 aa16.54■□□□□ 0.24
RORA-212ENST00000560004 KIAA1210Q9ULL0 1709 aa16.54■□□□□ 0.24
RORA-212ENST00000560004 ADGRF5Q8IZF2 1346 aa16.54■□□□□ 0.24
RORA-212ENST00000560004 NUTM2DQ5VT03 806 aaPredicted RBP16.53■□□□□ 0.24
RORA-212ENST00000560004 ADAMTS13Q76LX8 1427 aa16.53■□□□□ 0.24
RORA-212ENST00000560004 DIP2AQ14689 1571 aa16.52■□□□□ 0.24
RORA-212ENST00000560004 DCAF11Q8TEB1 546 aa16.52■□□□□ 0.24
RORA-212ENST00000560004 ALKQ9UM73 1620 aa16.52■□□□□ 0.23
RORA-212ENST00000560004 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.51■□□□□ 0.23
RORA-212ENST00000560004 NPHP4O75161 1426 aaPredicted RBP16.51■□□□□ 0.23
RORA-212ENST00000560004 NCKAP5LQ9HCH0 1330 aa16.5■□□□□ 0.23
RORA-212ENST00000560004 TXNDC2Q86VQ3 553 aa16.5■□□□□ 0.23
RORA-212ENST00000560004 TIMELESSQ9UNS1 1208 aa16.5■□□□□ 0.23
RORA-212ENST00000560004 ADGRB1O14514 1584 aa16.49■□□□□ 0.23
RORA-212ENST00000560004 ANKLE2Q86XL3 938 aa16.49■□□□□ 0.23
RORA-212ENST00000560004 RALGAPBQ86X10 1494 aa16.48■□□□□ 0.23
RORA-212ENST00000560004 EID1Q9Y6B2 187 aa16.48■□□□□ 0.23
RORA-212ENST00000560004 VGFO15240 615 aaPredicted RBP16.47■□□□□ 0.23
RORA-212ENST00000560004 PPP1R15AO75807 674 aaPredicted RBP16.47■□□□□ 0.23
RORA-212ENST00000560004 NBPF8Q3BBV2 869 aa16.47■□□□□ 0.23
RORA-212ENST00000560004 STAC3Q96MF2 364 aa16.47■□□□□ 0.23
RORA-212ENST00000560004 KDM2AQ9Y2K7 1162 aa16.47■□□□□ 0.23
RORA-212ENST00000560004 XRN1Q8IZH2 1706 aaKnown RBP16.45■□□□□ 0.22
RORA-212ENST00000560004 NWD1Q149M9 1564 aa16.45■□□□□ 0.22
RORA-212ENST00000560004 KNDC1Q76NI1 1749 aa16.45■□□□□ 0.22
RORA-212ENST00000560004 HDGFP51858 240 aaKnown RBP16.44■□□□□ 0.22
RORA-212ENST00000560004 STRCP1A6NGW2 1772 aa16.43■□□□□ 0.22
RORA-212ENST00000560004 CHD2O14647 1828 aaKnown RBP16.43■□□□□ 0.22
RORA-212ENST00000560004 METP08581 1390 aa16.42■□□□□ 0.22
RORA-212ENST00000560004 GPRASP1Q5JY77 1395 aa16.41■□□□□ 0.22
RORA-212ENST00000560004 CFAP70Q5T0N1 1121 aa16.41■□□□□ 0.22
RORA-212ENST00000560004 PTPRUQ92729 1446 aa16.41■□□□□ 0.22
RORA-212ENST00000560004 ARHGEF28Q8N1W1 1705 aaKnown RBP16.41■□□□□ 0.22
RORA-212ENST00000560004 SLC26A8Q96RN1 970 aa16.4■□□□□ 0.22
RORA-212ENST00000560004 C14orf93Q9H972 538 aaKnown RBP16.4■□□□□ 0.22
RORA-212ENST00000560004 CPS1P31327 1500 aa16.4■□□□□ 0.22
RORA-212ENST00000560004 TBX22Q9Y458 520 aa16.38■□□□□ 0.21
RORA-212ENST00000560004 NBPF1Q3BBV0 1214 aa16.37■□□□□ 0.21
RORA-212ENST00000560004 PIK3R4Q99570 1358 aa16.37■□□□□ 0.21
RORA-212ENST00000560004 TECPR2O15040 1411 aa16.36■□□□□ 0.21
RORA-212ENST00000560004 ROCK2O75116 1388 aaKnown RBP16.36■□□□□ 0.21
RORA-212ENST00000560004 YTHDC2Q9H6S0 1430 aaKnown RBP16.36■□□□□ 0.21
RORA-212ENST00000560004 DLC1Q96QB1 1528 aa16.35■□□□□ 0.21
RORA-212ENST00000560004 TMEM132EQ6IEE7 984 aa16.34■□□□□ 0.21
RORA-212ENST00000560004 BCANQ96GW7 911 aa16.34■□□□□ 0.21
RORA-212ENST00000560004 LRPPRCP42704 1394 aaKnown RBP16.34■□□□□ 0.21
RORA-212ENST00000560004 PTCH1Q13635 1447 aa16.34■□□□□ 0.21
RORA-212ENST00000560004 NKTRP30414 1462 aaKnown RBP16.33■□□□□ 0.2
RORA-212ENST00000560004 XIRP1Q702N8 1843 aaKnown RBP16.33■□□□□ 0.2
RORA-212ENST00000560004 ZEB1P37275 1124 aaPredicted RBP16.32■□□□□ 0.2
RORA-212ENST00000560004 LTBP4Q8N2S1 1624 aa16.32■□□□□ 0.2
RORA-212ENST00000560004 QRICH2Q9H0J4 1663 aa16.3■□□□□ 0.2
RORA-212ENST00000560004 ABCC11Q96J66 1382 aa16.3■□□□□ 0.2
RORA-212ENST00000560004 DMRT2Q9Y5R5 561 aa16.3■□□□□ 0.2
RORA-212ENST00000560004 ROBO2Q9HCK4 1378 aa16.29■□□□□ 0.2
RORA-212ENST00000560004 ZNF335Q9H4Z2 1342 aaPredicted RBP16.29■□□□□ 0.2
RORA-212ENST00000560004 NALCNQ8IZF0 1738 aa16.29■□□□□ 0.2
RORA-212ENST00000560004 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.28■□□□□ 0.2
RORA-212ENST00000560004 KCNA6P17658 529 aa16.27■□□□□ 0.2
RORA-212ENST00000560004 CARD11Q9BXL7 1154 aa16.27■□□□□ 0.2
RORA-212ENST00000560004 AMOTL2Q9Y2J4 779 aa16.27■□□□□ 0.2
RORA-212ENST00000560004 FAM135BQ49AJ0 1406 aa16.27■□□□□ 0.19
RORA-212ENST00000560004 PLEKHH1Q9ULM0 1364 aa16.26■□□□□ 0.19
RORA-212ENST00000560004 LRRC7Q96NW7 1537 aa16.26■□□□□ 0.19
RORA-212ENST00000560004 ADRA2BP18089 450 aa16.26■□□□□ 0.19
RORA-212ENST00000560004 ADGRB2O60241 1585 aa16.26■□□□□ 0.19
RORA-212ENST00000560004 USP47Q96K76 1375 aa16.26■□□□□ 0.19
RORA-212ENST00000560004 TRAK1Q9UPV9 953 aa16.25■□□□□ 0.19
RORA-212ENST00000560004 STK26Q9P289 416 aa16.24■□□□□ 0.19
RORA-212ENST00000560004 EIF3AQ14152 1382 aaKnown RBP16.22■□□□□ 0.19
RORA-212ENST00000560004 TULP4Q9NRJ4 1543 aa16.21■□□□□ 0.19
RORA-212ENST00000560004 CDC42BPGQ6DT37 1551 aa16.21■□□□□ 0.18
RORA-212ENST00000560004 SIRT1Q96EB6 747 aa16.2■□□□□ 0.18
RORA-212ENST00000560004 PRAM1Q96QH2 718 aa16.2■□□□□ 0.18
RORA-212ENST00000560004 ADGRL3Q9HAR2 1447 aa16.19■□□□□ 0.18
RORA-212ENST00000560004 TMEM94Q12767 1356 aa16.19■□□□□ 0.18
RORA-212ENST00000560004 SBNO2Q9Y2G9 1366 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms