RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 DAPK1P53355 1430 aa16.98■□□□□ 0.31
TRAF3-207ENST00000559734 PPP1R15AO75807 674 aaPredicted RBP16.98■□□□□ 0.31
TRAF3-207ENST00000559734 PTPN23Q9H3S7 1636 aa16.97■□□□□ 0.31
TRAF3-207ENST00000559734 LMTK2Q8IWU2 1503 aa16.96■□□□□ 0.31
TRAF3-207ENST00000559734 LRP6O75581 1613 aa16.96■□□□□ 0.31
TRAF3-207ENST00000559734 COL16A1Q07092 1604 aaPredicted RBP16.96■□□□□ 0.3
TRAF3-207ENST00000559734 NOS1P29475 1434 aa16.96■□□□□ 0.3
TRAF3-207ENST00000559734 ANKRD30AQ9BXX3 1397 aa16.95■□□□□ 0.3
TRAF3-207ENST00000559734 ZNF772Q68DY9 489 aaPredicted RBP16.95■□□□□ 0.3
TRAF3-207ENST00000559734 UPF1Q92900 1129 aaKnown RBP eCLIP16.95■□□□□ 0.3
TRAF3-207ENST00000559734 SPATA31A6Q5VVP1 1343 aa16.94■□□□□ 0.3
TRAF3-207ENST00000559734 SLC52A1Q9NWF4 448 aa16.93■□□□□ 0.3
TRAF3-207ENST00000559734 PLEKHG1Q9ULL1 1385 aa16.92■□□□□ 0.3
TRAF3-207ENST00000559734 FGD6Q6ZV73 1430 aa16.91■□□□□ 0.3
TRAF3-207ENST00000559734 RIMS2Q9UQ26 1411 aa16.91■□□□□ 0.3
TRAF3-207ENST00000559734 CHGAP10645 457 aaKnown RBP16.91■□□□□ 0.3
TRAF3-207ENST00000559734 NUTM2BA6NNL0 878 aaPredicted RBP16.9■□□□□ 0.3
TRAF3-207ENST00000559734 NUTM2EB1AL46 878 aaPredicted RBP16.9■□□□□ 0.3
TRAF3-207ENST00000559734 NUTM2AQ8IVF1 878 aaPredicted RBP16.9■□□□□ 0.3
TRAF3-207ENST00000559734 ZFYVE9O95405 1425 aa16.89■□□□□ 0.29
TRAF3-207ENST00000559734 LOC105371045A0A1W2PR82 267 aa16.89■□□□□ 0.29
TRAF3-207ENST00000559734 ATF3P18847 181 aa16.89■□□□□ 0.29
TRAF3-207ENST00000559734 HDGFP51858 240 aaKnown RBP16.89■□□□□ 0.29
TRAF3-207ENST00000559734 APLP2Q06481 763 aa16.89■□□□□ 0.29
TRAF3-207ENST00000559734 CHD2O14647 1828 aaKnown RBP16.89■□□□□ 0.29
TRAF3-207ENST00000559734 RXRBP28702 533 aa16.88■□□□□ 0.29
TRAF3-207ENST00000559734 NUTM2DQ5VT03 806 aaPredicted RBP16.88■□□□□ 0.29
TRAF3-207ENST00000559734 GCC2Q8IWJ2 1684 aa16.88■□□□□ 0.29
TRAF3-207ENST00000559734 CADPS2Q86UW7 1296 aa16.87■□□□□ 0.29
TRAF3-207ENST00000559734 MYO5BQ9ULV0 1848 aa16.86■□□□□ 0.29
TRAF3-207ENST00000559734 AHDC1Q5TGY3 1603 aaPredicted RBP16.86■□□□□ 0.29
TRAF3-207ENST00000559734 SHPRHQ149N8 1683 aa16.85■□□□□ 0.29
TRAF3-207ENST00000559734 TBX22Q9Y458 520 aa16.85■□□□□ 0.29
TRAF3-207ENST00000559734 NCOA3Q9Y6Q9 1424 aa16.85■□□□□ 0.29
TRAF3-207ENST00000559734 RPRD2Q5VT52 1461 aaKnown RBP16.85■□□□□ 0.29
TRAF3-207ENST00000559734 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.84■□□□□ 0.29
TRAF3-207ENST00000559734 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.84■□□□□ 0.29
TRAF3-207ENST00000559734 C19orf44Q9H6X5 657 aa16.84■□□□□ 0.29
TRAF3-207ENST00000559734 TMEM131LA2VDJ0 1609 aa16.83■□□□□ 0.28
TRAF3-207ENST00000559734 ADAMTS13Q76LX8 1427 aa16.82■□□□□ 0.28
TRAF3-207ENST00000559734 AFF2P51816 1311 aa16.82■□□□□ 0.28
TRAF3-207ENST00000559734 BRINP3Q76B58 766 aa16.82■□□□□ 0.28
TRAF3-207ENST00000559734 ANKRD50Q9ULJ7 1429 aa16.81■□□□□ 0.28
TRAF3-207ENST00000559734 FAM50AQ14320 339 aaKnown RBP16.81■□□□□ 0.28
TRAF3-207ENST00000559734 ADGRL2O95490 1459 aa16.8■□□□□ 0.28
TRAF3-207ENST00000559734 AMOTL2Q9Y2J4 779 aa16.79■□□□□ 0.28
TRAF3-207ENST00000559734 DIP2AQ14689 1571 aa16.79■□□□□ 0.28
TRAF3-207ENST00000559734 CDK12Q9NYV4 1490 aaPredicted RBP16.79■□□□□ 0.28
TRAF3-207ENST00000559734 C8orf37Q96NL8 207 aa16.78■□□□□ 0.28
TRAF3-207ENST00000559734 PIK3R4Q99570 1358 aa16.77■□□□□ 0.28
TRAF3-207ENST00000559734 TRPM2O94759 1503 aa16.77■□□□□ 0.28
TRAF3-207ENST00000559734 ASXL1Q8IXJ9 1541 aa16.77■□□□□ 0.28
TRAF3-207ENST00000559734 RGS12O14924 1447 aa16.76■□□□□ 0.27
TRAF3-207ENST00000559734 PTPRUQ92729 1446 aa16.75■□□□□ 0.27
TRAF3-207ENST00000559734 SETD5Q9C0A6 1442 aa16.73■□□□□ 0.27
TRAF3-207ENST00000559734 DDX17Q92841 729 aaKnown RBP16.73■□□□□ 0.27
TRAF3-207ENST00000559734 QTRT2Q9H974 415 aaKnown RBP16.73■□□□□ 0.27
TRAF3-207ENST00000559734 DCCP43146 1447 aa16.72■□□□□ 0.27
TRAF3-207ENST00000559734 RBM6P78332 1123 aaKnown RBP16.72■□□□□ 0.27
TRAF3-207ENST00000559734 LRRC59Q96AG4 307 aaKnown RBP16.72■□□□□ 0.27
TRAF3-207ENST00000559734 UNC13BO14795 1591 aa16.72■□□□□ 0.27
TRAF3-207ENST00000559734 E9PCH4 1651 aa16.72■□□□□ 0.27
TRAF3-207ENST00000559734 MST1RQ04912 1400 aa16.71■□□□□ 0.27
TRAF3-207ENST00000559734 ADAMTS2O95450 1211 aa16.71■□□□□ 0.27
TRAF3-207ENST00000559734 NHSL1Q5SYE7 1610 aa16.7■□□□□ 0.26
TRAF3-207ENST00000559734 PNPLA6Q8IY17 1366 aa16.69■□□□□ 0.26
TRAF3-207ENST00000559734 NGLY1Q96IV0 654 aa16.68■□□□□ 0.26
TRAF3-207ENST00000559734 XRN1Q8IZH2 1706 aaKnown RBP16.67■□□□□ 0.26
TRAF3-207ENST00000559734 ZNF326Q5BKZ1 582 aaKnown RBP16.67■□□□□ 0.26
TRAF3-207ENST00000559734 ATAD2Q6PL18 1390 aa16.65■□□□□ 0.26
TRAF3-207ENST00000559734 NRXN3Q9Y4C0 1643 aa16.65■□□□□ 0.26
TRAF3-207ENST00000559734 NUP155O75694 1391 aa16.64■□□□□ 0.26
TRAF3-207ENST00000559734 METP08581 1390 aa16.64■□□□□ 0.26
TRAF3-207ENST00000559734 ADGRL3Q9HAR2 1447 aa16.64■□□□□ 0.25
TRAF3-207ENST00000559734 IQGAP3Q86VI3 1631 aa16.64■□□□□ 0.25
TRAF3-207ENST00000559734 SETBP1Q9Y6X0 1596 aa16.64■□□□□ 0.25
TRAF3-207ENST00000559734 USP21Q9UK80 565 aa16.63■□□□□ 0.25
TRAF3-207ENST00000559734 NALCNQ8IZF0 1738 aa16.62■□□□□ 0.25
TRAF3-207ENST00000559734 ZRANB1Q9UGI0 708 aa16.61■□□□□ 0.25
TRAF3-207ENST00000559734 FOXD1Q16676 465 aa16.6■□□□□ 0.25
TRAF3-207ENST00000559734 TRPC5Q9UL62 973 aaPredicted RBP16.6■□□□□ 0.25
TRAF3-207ENST00000559734 ITGAEP38570 1179 aa16.59■□□□□ 0.25
TRAF3-207ENST00000559734 C1orf167Q5SNV9 1468 aa16.59■□□□□ 0.25
TRAF3-207ENST00000559734 ROCK1Q13464 1354 aa16.57■□□□□ 0.24
TRAF3-207ENST00000559734 ORAI2Q96SN7 254 aa16.56■□□□□ 0.24
TRAF3-207ENST00000559734 SPHKAPQ2M3C7 1700 aa16.56■□□□□ 0.24
TRAF3-207ENST00000559734 PTCH1Q13635 1447 aa16.54■□□□□ 0.24
TRAF3-207ENST00000559734 SOS2Q07890 1332 aaPredicted RBP16.54■□□□□ 0.24
TRAF3-207ENST00000559734 ATRNO75882 1429 aa16.53■□□□□ 0.24
TRAF3-207ENST00000559734 NEXMIFQ5QGS0 1516 aa16.53■□□□□ 0.24
TRAF3-207ENST00000559734 FNBP4Q8N3X1 1017 aaPredicted RBP16.52■□□□□ 0.24
TRAF3-207ENST00000559734 ROBO2Q9HCK4 1378 aa16.51■□□□□ 0.23
TRAF3-207ENST00000559734 LAMC1P11047 1609 aa16.5■□□□□ 0.23
TRAF3-207ENST00000559734 CLTCL1P53675 1640 aa16.5■□□□□ 0.23
TRAF3-207ENST00000559734 XPCQ01831 940 aaPredicted RBP16.48■□□□□ 0.23
TRAF3-207ENST00000559734 ESCO1Q5FWF5 840 aa16.47■□□□□ 0.23
TRAF3-207ENST00000559734 CCDC125Q86Z20 511 aa16.47■□□□□ 0.23
TRAF3-207ENST00000559734 COL22A1Q8NFW1 1626 aaPredicted RBP16.47■□□□□ 0.23
TRAF3-207ENST00000559734 MYOM2P54296 1465 aa16.47■□□□□ 0.23
TRAF3-207ENST00000559734 SRCAPQ6ZRS2 3230 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms