RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 SPHKAPQ2M3C7 1700 aa13.34□□□□□ -0.27
HMG20A-209ENST00000559728 ARHGAP23Q9P227 1491 aa13.34□□□□□ -0.27
HMG20A-209ENST00000559728 ADGRB3O60242 1522 aa13.33□□□□□ -0.28
HMG20A-209ENST00000559728 TMEM131LA2VDJ0 1609 aa13.32□□□□□ -0.28
HMG20A-209ENST00000559728 SPATA31E1Q6ZUB1 1445 aa13.32□□□□□ -0.28
HMG20A-209ENST00000559728 CFAP65Q6ZU64 1925 aaKnown RBP13.32□□□□□ -0.28
HMG20A-209ENST00000559728 UBR1Q8IWV7 1749 aa13.31□□□□□ -0.28
HMG20A-209ENST00000559728 SLIT1O75093 1534 aa13.31□□□□□ -0.28
HMG20A-209ENST00000559728 THEMISQ8N1K5 641 aaPredicted RBP13.31□□□□□ -0.28
HMG20A-209ENST00000559728 TMEM2Q9UHN6 1383 aa13.31□□□□□ -0.28
HMG20A-209ENST00000559728 CCDC144AA2RUR9 1427 aa13.3□□□□□ -0.28
HMG20A-209ENST00000559728 ZFYVE9O95405 1425 aa13.3□□□□□ -0.28
HMG20A-209ENST00000559728 LTKP29376 864 aa13.3□□□□□ -0.28
HMG20A-209ENST00000559728 KDM5AP29375 1690 aaKnown RBP13.29□□□□□ -0.28
HMG20A-209ENST00000559728 SPINK5Q9NQ38 1064 aaPredicted RBP13.29□□□□□ -0.28
HMG20A-209ENST00000559728 NCKAP5LQ9HCH0 1330 aa13.29□□□□□ -0.28
HMG20A-209ENST00000559728 CAPN15O75808 1086 aa13.28□□□□□ -0.28
HMG20A-209ENST00000559728 CHGAP10645 457 aaKnown RBP13.27□□□□□ -0.29
HMG20A-209ENST00000559728 SIN3AQ96ST3 1273 aa13.27□□□□□ -0.29
HMG20A-209ENST00000559728 NEURL4Q96JN8 1562 aa13.26□□□□□ -0.29
HMG20A-209ENST00000559728 STAG3Q9UJ98 1225 aa13.26□□□□□ -0.29
HMG20A-209ENST00000559728 RIMS2Q9UQ26 1411 aa13.26□□□□□ -0.29
HMG20A-209ENST00000559728 STRCQ7RTU9 1775 aa13.25□□□□□ -0.29
HMG20A-209ENST00000559728 MED14O60244 1454 aa13.25□□□□□ -0.29
HMG20A-209ENST00000559728 NEXMIFQ5QGS0 1516 aa13.24□□□□□ -0.29
HMG20A-209ENST00000559728 TXNDC2Q86VQ3 553 aa13.24□□□□□ -0.29
HMG20A-209ENST00000559728 ANKLE2Q86XL3 938 aa13.24□□□□□ -0.29
HMG20A-209ENST00000559728 ATF5Q9Y2D1 282 aaPredicted RBP13.24□□□□□ -0.29
HMG20A-209ENST00000559728 SCAF11Q99590 1463 aaKnown RBP13.23□□□□□ -0.29
HMG20A-209ENST00000559728 NUTM2DQ5VT03 806 aaPredicted RBP13.23□□□□□ -0.29
HMG20A-209ENST00000559728 RPGRIP1LQ68CZ1 1315 aa13.22□□□□□ -0.29
HMG20A-209ENST00000559728 RGL3Q3MIN7 710 aa13.22□□□□□ -0.29
HMG20A-209ENST00000559728 NPHP4O75161 1426 aaPredicted RBP13.22□□□□□ -0.29
HMG20A-209ENST00000559728 ATXN8OSP0DMR3 200 aa13.21□□□□□ -0.29
HMG20A-209ENST00000559728 PLEKHG1Q9ULL1 1385 aa13.2□□□□□ -0.3
HMG20A-209ENST00000559728 MYO5BQ9ULV0 1848 aa13.2□□□□□ -0.3
HMG20A-209ENST00000559728 ZNF326Q5BKZ1 582 aaKnown RBP13.2□□□□□ -0.3
HMG20A-209ENST00000559728 ADAMTS13Q76LX8 1427 aa13.2□□□□□ -0.3
HMG20A-209ENST00000559728 ADGRF5Q8IZF2 1346 aa13.19□□□□□ -0.3
HMG20A-209ENST00000559728 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.19□□□□□ -0.3
HMG20A-209ENST00000559728 EID1Q9Y6B2 187 aa13.19□□□□□ -0.3
HMG20A-209ENST00000559728 NRXN1Q9ULB1 1477 aa13.18□□□□□ -0.3
HMG20A-209ENST00000559728 CLSPNQ9HAW4 1339 aa13.17□□□□□ -0.3
HMG20A-209ENST00000559728 NEUROD1Q13562 356 aa13.17□□□□□ -0.3
HMG20A-209ENST00000559728 KIF1BO60333 1816 aa13.16□□□□□ -0.3
HMG20A-209ENST00000559728 L3MBTL2Q969R5 705 aa13.16□□□□□ -0.3
HMG20A-209ENST00000559728 NRXN3Q9Y4C0 1643 aa13.16□□□□□ -0.3
HMG20A-209ENST00000559728 MYOM2P54296 1465 aa13.16□□□□□ -0.3
HMG20A-209ENST00000559728 VGFO15240 615 aaPredicted RBP13.15□□□□□ -0.3
HMG20A-209ENST00000559728 HDGFP51858 240 aaKnown RBP13.15□□□□□ -0.3
HMG20A-209ENST00000559728 SLC26A8Q96RN1 970 aa13.15□□□□□ -0.3
HMG20A-209ENST00000559728 POLR1AO95602 1720 aaPredicted RBP13.15□□□□□ -0.3
HMG20A-209ENST00000559728 SETBP1Q9Y6X0 1596 aa13.15□□□□□ -0.3
HMG20A-209ENST00000559728 PIK3C2GO75747 1445 aa13.14□□□□□ -0.31
HMG20A-209ENST00000559728 IFT172Q9UG01 1749 aa13.14□□□□□ -0.31
HMG20A-209ENST00000559728 PPP1R15AO75807 674 aaPredicted RBP13.14□□□□□ -0.31
HMG20A-209ENST00000559728 DCAF11Q8TEB1 546 aa13.14□□□□□ -0.31
HMG20A-209ENST00000559728 TBX22Q9Y458 520 aa13.14□□□□□ -0.31
HMG20A-209ENST00000559728 PPLO60437 1756 aa13.14□□□□□ -0.31
HMG20A-209ENST00000559728 IQGAP1P46940 1657 aa13.13□□□□□ -0.31
HMG20A-209ENST00000559728 CCER1Q8TC90 406 aaPredicted RBP13.13□□□□□ -0.31
HMG20A-209ENST00000559728 ZNF219Q9P2Y4 722 aaPredicted RBP13.13□□□□□ -0.31
HMG20A-209ENST00000559728 ZNF335Q9H4Z2 1342 aaPredicted RBP13.13□□□□□ -0.31
HMG20A-209ENST00000559728 METP08581 1390 aa13.12□□□□□ -0.31
HMG20A-209ENST00000559728 KDM2AQ9Y2K7 1162 aa13.12□□□□□ -0.31
HMG20A-209ENST00000559728 PTPRUQ92729 1446 aa13.12□□□□□ -0.31
HMG20A-209ENST00000559728 STAC3Q96MF2 364 aa13.1□□□□□ -0.31
HMG20A-209ENST00000559728 C14orf93Q9H972 538 aaKnown RBP13.1□□□□□ -0.31
HMG20A-209ENST00000559728 PRAG1Q86YV5 1406 aa13.1□□□□□ -0.31
HMG20A-209ENST00000559728 LTBP4Q8N2S1 1624 aa13.1□□□□□ -0.31
HMG20A-209ENST00000559728 ASXL1Q8IXJ9 1541 aa13.09□□□□□ -0.31
HMG20A-209ENST00000559728 NBPF8Q3BBV2 869 aa13.09□□□□□ -0.31
HMG20A-209ENST00000559728 CFAP70Q5T0N1 1121 aa13.09□□□□□ -0.31
HMG20A-209ENST00000559728 ALKQ9UM73 1620 aa13.09□□□□□ -0.31
HMG20A-209ENST00000559728 SETD1AO15047 1707 aaKnown RBP13.08□□□□□ -0.32
HMG20A-209ENST00000559728 DIP2AQ14689 1571 aa13.07□□□□□ -0.32
HMG20A-209ENST00000559728 KCNA6P17658 529 aa13.07□□□□□ -0.32
HMG20A-209ENST00000559728 BCANQ96GW7 911 aa13.07□□□□□ -0.32
HMG20A-209ENST00000559728 ADGRB1O14514 1584 aa13.07□□□□□ -0.32
HMG20A-209ENST00000559728 TONSLQ96HA7 1378 aa13.07□□□□□ -0.32
HMG20A-209ENST00000559728 PIK3R4Q99570 1358 aa13.07□□□□□ -0.32
HMG20A-209ENST00000559728 ABCB7O75027 752 aa13.06□□□□□ -0.32
HMG20A-209ENST00000559728 TMEM132EQ6IEE7 984 aa13.05□□□□□ -0.32
HMG20A-209ENST00000559728 TIMELESSQ9UNS1 1208 aa13.05□□□□□ -0.32
HMG20A-209ENST00000559728 NWD1Q149M9 1564 aa13.05□□□□□ -0.32
HMG20A-209ENST00000559728 STRCP1A6NGW2 1772 aa13.04□□□□□ -0.32
HMG20A-209ENST00000559728 NBPF1Q3BBV0 1214 aa13.04□□□□□ -0.32
HMG20A-209ENST00000559728 ILDR1Q86SU0 546 aaPredicted RBP13.04□□□□□ -0.32
HMG20A-209ENST00000559728 AMOTL2Q9Y2J4 779 aa13.04□□□□□ -0.32
HMG20A-209ENST00000559728 LRPPRCP42704 1394 aaKnown RBP13.03□□□□□ -0.32
HMG20A-209ENST00000559728 ROBO2Q9HCK4 1378 aa13.02□□□□□ -0.33
HMG20A-209ENST00000559728 TECPR2O15040 1411 aa13.02□□□□□ -0.33
HMG20A-209ENST00000559728 LRRC7Q96NW7 1537 aa13.02□□□□□ -0.33
HMG20A-209ENST00000559728 XRN1Q8IZH2 1706 aaKnown RBP13.02□□□□□ -0.33
HMG20A-209ENST00000559728 ABCC11Q96J66 1382 aa13.01□□□□□ -0.33
HMG20A-209ENST00000559728 YTHDC2Q9H6S0 1430 aaKnown RBP13.01□□□□□ -0.33
HMG20A-209ENST00000559728 CPS1P31327 1500 aa13□□□□□ -0.33
HMG20A-209ENST00000559728 NKTRP30414 1462 aaKnown RBP13□□□□□ -0.33
HMG20A-209ENST00000559728 RBM33Q96EV2 1170 aaKnown RBP13□□□□□ -0.33
HMG20A-209ENST00000559728 PTCH1Q13635 1447 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms