RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 NAIPQ13075 1403 aa2.97□□□□□ -1.93
RGPD1-204ENST00000559485 ABCA10Q8WWZ4 1543 aa2.97□□□□□ -1.93
RGPD1-204ENST00000559485 ADGBQ8N7X0 1667 aa2.97□□□□□ -1.93
RGPD1-204ENST00000559485 PES1O00541 588 aaKnown RBP2.96□□□□□ -1.93
RGPD1-204ENST00000559485 NRDCO43847 1150 aa2.96□□□□□ -1.93
RGPD1-204ENST00000559485 IRX6P78412 446 aaPredicted RBP2.96□□□□□ -1.93
RGPD1-204ENST00000559485 NFKBIBQ15653 356 aa2.96□□□□□ -1.93
RGPD1-204ENST00000559485 SASS6Q6UVJ0 657 aa2.96□□□□□ -1.93
RGPD1-204ENST00000559485 NLRP13Q86W25 1043 aa2.96□□□□□ -1.93
RGPD1-204ENST00000559485 IGF1RP08069 1367 aa2.96□□□□□ -1.93
RGPD1-204ENST00000559485 PMFBP1Q8TBY8 1022 aa2.96□□□□□ -1.94
RGPD1-204ENST00000559485 RALGAPBQ86X10 1494 aa2.96□□□□□ -1.94
RGPD1-204ENST00000559485 SAMD9Q5K651 1589 aa2.96□□□□□ -1.94
RGPD1-204ENST00000559485 HAP1P54257 671 aaPredicted RBP2.96□□□□□ -1.94
RGPD1-204ENST00000559485 WDR43Q15061 677 aaKnown RBP eCLIP2.96□□□□□ -1.94
RGPD1-204ENST00000559485 PLCD4Q9BRC7 762 aa2.96□□□□□ -1.94
RGPD1-204ENST00000559485 FAM107BQ9H098 131 aa2.96□□□□□ -1.94
RGPD1-204ENST00000559485 FHOD3Q2V2M9 1422 aa2.96□□□□□ -1.94
RGPD1-204ENST00000559485 NEFHP12036 1026 aa2.96□□□□□ -1.94
RGPD1-204ENST00000559485 LIG1P18858 919 aa2.96□□□□□ -1.94
RGPD1-204ENST00000559485 NBPF1Q3BBV0 1214 aa2.96□□□□□ -1.94
RGPD1-204ENST00000559485 STAC3Q96MF2 364 aa2.96□□□□□ -1.94
RGPD1-204ENST00000559485 GRIN2BQ13224 1484 aa2.96□□□□□ -1.94
RGPD1-204ENST00000559485 DHX29Q7Z478 1369 aaKnown RBP2.95□□□□□ -1.94
RGPD1-204ENST00000559485 PRIMPOLQ96LW4 560 aa2.95□□□□□ -1.94
RGPD1-204ENST00000559485 PAIP2Q9BPZ3 127 aaKnown RBP2.95□□□□□ -1.94
RGPD1-204ENST00000559485 USP47Q96K76 1375 aa2.95□□□□□ -1.94
RGPD1-204ENST00000559485 HOXD11P31277 338 aaPredicted RBP2.95□□□□□ -1.94
RGPD1-204ENST00000559485 DMTNQ08495 405 aa2.95□□□□□ -1.94
RGPD1-204ENST00000559485 MPHOSPH9Q99550 1183 aa2.95□□□□□ -1.94
RGPD1-204ENST00000559485 BCL11BQ9C0K0 894 aaPredicted RBP2.95□□□□□ -1.94
RGPD1-204ENST00000559485 YY1AP1Q9H869 796 aa2.95□□□□□ -1.94
RGPD1-204ENST00000559485 ARHGEF11O15085 1522 aa2.95□□□□□ -1.94
RGPD1-204ENST00000559485 PPP4R3CPQ6ZMV5 832 aa2.95□□□□□ -1.94
RGPD1-204ENST00000559485 KCNH8Q96L42 1107 aa2.95□□□□□ -1.94
RGPD1-204ENST00000559485 TIGD1Q96MW7 591 aa2.95□□□□□ -1.94
RGPD1-204ENST00000559485 UHRF1BP1Q6BDS2 1440 aa2.95□□□□□ -1.94
RGPD1-204ENST00000559485 CGNL1Q0VF96 1302 aa2.95□□□□□ -1.94
RGPD1-204ENST00000559485 KIF16BQ96L93 1317 aa2.95□□□□□ -1.94
RGPD1-204ENST00000559485 SNAPC4Q5SXM2 1469 aa2.95□□□□□ -1.94
RGPD1-204ENST00000559485 DNMT1P26358 1616 aaKnown RBP2.95□□□□□ -1.94
RGPD1-204ENST00000559485 NESP48681 1621 aa2.95□□□□□ -1.94
RGPD1-204ENST00000559485 ATXN8OSP0DMR3 200 aa2.95□□□□□ -1.94
RGPD1-204ENST00000559485 KLHL34Q8N239 644 aa2.95□□□□□ -1.94
RGPD1-204ENST00000559485 BRPF3Q9ULD4 1205 aa2.95□□□□□ -1.94
RGPD1-204ENST00000559485 KIF7Q2M1P5 1343 aa2.94□□□□□ -1.94
RGPD1-204ENST00000559485 KIAA1107Q9UPP5 1409 aa2.94□□□□□ -1.94
RGPD1-204ENST00000559485 ESPNB1AK53 854 aa2.94□□□□□ -1.94
RGPD1-204ENST00000559485 GABPB1Q06547 395 aaPredicted RBP2.94□□□□□ -1.94
RGPD1-204ENST00000559485 ZRSR1Q15695 479 aaKnown RBP2.94□□□□□ -1.94
RGPD1-204ENST00000559485 CASC1Q6TDU7 716 aa2.94□□□□□ -1.94
RGPD1-204ENST00000559485 CNKSR2Q8WXI2 1034 aa2.94□□□□□ -1.94
RGPD1-204ENST00000559485 EFCC1Q9HA90 598 aa2.94□□□□□ -1.94
RGPD1-204ENST00000559485 CGNQ9P2M7 1197 aaKnown RBP2.94□□□□□ -1.94
RGPD1-204ENST00000559485 LAMC1P11047 1609 aa2.94□□□□□ -1.94
RGPD1-204ENST00000559485 SHANK2Q9UPX8 1470 aa2.94□□□□□ -1.94
RGPD1-204ENST00000559485 NUP160Q12769 1436 aa2.94□□□□□ -1.94
RGPD1-204ENST00000559485 CHMP5Q9NZZ3 219 aa2.94□□□□□ -1.94
RGPD1-204ENST00000559485 LAMC3Q9Y6N6 1575 aa2.94□□□□□ -1.94
RGPD1-204ENST00000559485 RBM25P49756 843 aaKnown RBP2.94□□□□□ -1.94
RGPD1-204ENST00000559485 SARNPP82979 210 aaKnown RBP2.94□□□□□ -1.94
RGPD1-204ENST00000559485 ZSCAN30Q86W11 494 aa2.94□□□□□ -1.94
RGPD1-204ENST00000559485 PSMD1Q99460 953 aa2.94□□□□□ -1.94
RGPD1-204ENST00000559485 ARGLU1Q9NWB6 273 aaPredicted RBP2.94□□□□□ -1.94
RGPD1-204ENST00000559485 CLASP1Q7Z460 1538 aa2.94□□□□□ -1.94
RGPD1-204ENST00000559485 LRPPRCP42704 1394 aaKnown RBP2.94□□□□□ -1.94
RGPD1-204ENST00000559485 SETSIPP0DME0 302 aa2.94□□□□□ -1.94
RGPD1-204ENST00000559485 RABEP1Q15276 862 aa2.94□□□□□ -1.94
RGPD1-204ENST00000559485 TICAM2Q86XR7 235 aa2.94□□□□□ -1.94
RGPD1-204ENST00000559485 SLC26A8Q96RN1 970 aa2.94□□□□□ -1.94
RGPD1-204ENST00000559485 FEZ1Q99689 392 aa2.94□□□□□ -1.94
RGPD1-204ENST00000559485 DEF6Q9H4E7 631 aa2.94□□□□□ -1.94
RGPD1-204ENST00000559485 FOXD4L1Q9NU39 408 aa2.94□□□□□ -1.94
RGPD1-204ENST00000559485 DAPK1P53355 1430 aa2.93□□□□□ -1.94
RGPD1-204ENST00000559485 UQCRHLA0A096LP55 91 aa2.93□□□□□ -1.94
RGPD1-204ENST00000559485 PATL2C9JE40 543 aaKnown RBP2.93□□□□□ -1.94
RGPD1-204ENST00000559485 UQCRHP07919 91 aa2.93□□□□□ -1.94
RGPD1-204ENST00000559485 TPM4P67936 248 aa2.93□□□□□ -1.94
RGPD1-204ENST00000559485 AK7Q96M32 723 aa2.93□□□□□ -1.94
RGPD1-204ENST00000559485 BRMS1Q9HCU9 246 aa2.93□□□□□ -1.94
RGPD1-204ENST00000559485 CIZ1Q9ULV3 898 aaPredicted RBP2.93□□□□□ -1.94
RGPD1-204ENST00000559485 BLMP54132 1417 aaPredicted RBP2.93□□□□□ -1.94
RGPD1-204ENST00000559485 ERCC6Q03468 1493 aa2.93□□□□□ -1.94
RGPD1-204ENST00000559485 MPHOSPH10O00566 681 aaKnown RBP2.93□□□□□ -1.94
RGPD1-204ENST00000559485 KIF1CO43896 1103 aaKnown RBP2.93□□□□□ -1.94
RGPD1-204ENST00000559485 TPM1P09493 284 aa2.93□□□□□ -1.94
RGPD1-204ENST00000559485 CHMP7Q8WUX9 453 aaPredicted RBP2.93□□□□□ -1.94
RGPD1-204ENST00000559485 TACO1Q9BSH4 297 aaKnown RBP2.93□□□□□ -1.94
RGPD1-204ENST00000559485 ACBD3Q9H3P7 528 aa2.93□□□□□ -1.94
RGPD1-204ENST00000559485 ADGRL2O95490 1459 aa2.93□□□□□ -1.94
RGPD1-204ENST00000559485 PAK3O75914 559 aaPredicted RBP2.93□□□□□ -1.94
RGPD1-204ENST00000559485 HSP90AB1P08238 724 aaKnown RBP2.93□□□□□ -1.94
RGPD1-204ENST00000559485 MFAP1P55081 439 aaKnown RBP2.93□□□□□ -1.94
RGPD1-204ENST00000559485 TMF1P82094 1093 aa2.93□□□□□ -1.94
RGPD1-204ENST00000559485 PPP4R3BQ5MIZ7 849 aa2.93□□□□□ -1.94
RGPD1-204ENST00000559485 KIAA1211Q6ZU35 1233 aa2.93□□□□□ -1.94
RGPD1-204ENST00000559485 CCDC91Q7Z6B0 441 aa2.93□□□□□ -1.94
RGPD1-204ENST00000559485 TXLNBQ8N3L3 684 aa2.93□□□□□ -1.94
RGPD1-204ENST00000559485 CARD11Q9BXL7 1154 aa2.93□□□□□ -1.94
RGPD1-204ENST00000559485 SLKQ9H2G2 1235 aaPredicted RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms