RNA–Protein interactions for RNA: ENST00000559218.1

CLPX-205, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 4

Gene CLPX, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-205ENST00000559218 TMEM94Q12767 1356 aa13.53□□□□□ -0.24
CLPX-205ENST00000559218 EFCAB6Q5THR3 1501 aa13.53□□□□□ -0.24
CLPX-205ENST00000559218 LMTK2Q8IWU2 1503 aa13.53□□□□□ -0.24
CLPX-205ENST00000559218 XIRP1Q702N8 1843 aaKnown RBP13.52□□□□□ -0.25
CLPX-205ENST00000559218 NOS1P29475 1434 aa13.51□□□□□ -0.25
CLPX-205ENST00000559218 KCNA6P17658 529 aa13.51□□□□□ -0.25
CLPX-205ENST00000559218 FAM135BQ49AJ0 1406 aa13.5□□□□□ -0.25
CLPX-205ENST00000559218 TET3O43151 1660 aa13.5□□□□□ -0.25
CLPX-205ENST00000559218 PROSER2Q86WR7 435 aaPredicted RBP13.49□□□□□ -0.25
CLPX-205ENST00000559218 ADGRB3O60242 1522 aa13.48□□□□□ -0.25
CLPX-205ENST00000559218 KDM5AP29375 1690 aaKnown RBP13.47□□□□□ -0.25
CLPX-205ENST00000559218 FAM50AQ14320 339 aaKnown RBP13.47□□□□□ -0.25
CLPX-205ENST00000559218 SLC52A1Q9NWF4 448 aa13.47□□□□□ -0.25
CLPX-205ENST00000559218 ADGRL2O95490 1459 aa13.47□□□□□ -0.25
CLPX-205ENST00000559218 BCANQ96GW7 911 aa13.46□□□□□ -0.25
CLPX-205ENST00000559218 ANKRD50Q9ULJ7 1429 aa13.45□□□□□ -0.26
CLPX-205ENST00000559218 POTEAQ6S8J7 498 aa13.44□□□□□ -0.26
CLPX-205ENST00000559218 ZFYVE9O95405 1425 aa13.44□□□□□ -0.26
CLPX-205ENST00000559218 NKTRP30414 1462 aaKnown RBP13.43□□□□□ -0.26
CLPX-205ENST00000559218 NWD1Q149M9 1564 aa13.43□□□□□ -0.26
CLPX-205ENST00000559218 ROBO1Q9Y6N7 1651 aa13.43□□□□□ -0.26
CLPX-205ENST00000559218 RIMS2Q9UQ26 1411 aa13.42□□□□□ -0.26
CLPX-205ENST00000559218 SLAIN2Q9P270 581 aa13.42□□□□□ -0.26
CLPX-205ENST00000559218 PLEKHG1Q9ULL1 1385 aa13.42□□□□□ -0.26
CLPX-205ENST00000559218 RPRD2Q5VT52 1461 aaKnown RBP13.42□□□□□ -0.26
CLPX-205ENST00000559218 PPP1R15AO75807 674 aaPredicted RBP13.41□□□□□ -0.26
CLPX-205ENST00000559218 MSH6P52701 1360 aa13.41□□□□□ -0.26
CLPX-205ENST00000559218 NUTM2DQ5VT03 806 aaPredicted RBP13.4□□□□□ -0.26
CLPX-205ENST00000559218 CHGAP10645 457 aaKnown RBP13.38□□□□□ -0.27
CLPX-205ENST00000559218 TMEM131LA2VDJ0 1609 aa13.38□□□□□ -0.27
CLPX-205ENST00000559218 TBX22Q9Y458 520 aa13.37□□□□□ -0.27
CLPX-205ENST00000559218 KCNA4P22459 653 aa13.36□□□□□ -0.27
CLPX-205ENST00000559218 HDGFP51858 240 aaKnown RBP13.36□□□□□ -0.27
CLPX-205ENST00000559218 GCC2Q8IWJ2 1684 aa13.36□□□□□ -0.27
CLPX-205ENST00000559218 ADAMTS13Q76LX8 1427 aa13.36□□□□□ -0.27
CLPX-205ENST00000559218 MYO5BQ9ULV0 1848 aa13.36□□□□□ -0.27
CLPX-205ENST00000559218 JCADQ9P266 1359 aa13.35□□□□□ -0.27
CLPX-205ENST00000559218 C14orf37Q86TY3 774 aa13.35□□□□□ -0.27
CLPX-205ENST00000559218 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.35□□□□□ -0.27
CLPX-205ENST00000559218 UNC13BO14795 1591 aa13.35□□□□□ -0.27
CLPX-205ENST00000559218 CHD2O14647 1828 aaKnown RBP13.34□□□□□ -0.27
CLPX-205ENST00000559218 PHLPP1O60346 1717 aa13.33□□□□□ -0.27
CLPX-205ENST00000559218 ROCK1Q13464 1354 aa13.32□□□□□ -0.28
CLPX-205ENST00000559218 E9PCH4 1651 aa13.32□□□□□ -0.28
CLPX-205ENST00000559218 NUP155O75694 1391 aa13.32□□□□□ -0.28
CLPX-205ENST00000559218 COL16A1Q07092 1604 aaPredicted RBP13.31□□□□□ -0.28
CLPX-205ENST00000559218 NCOA3Q9Y6Q9 1424 aa13.31□□□□□ -0.28
CLPX-205ENST00000559218 ITGAEP38570 1179 aa13.31□□□□□ -0.28
CLPX-205ENST00000559218 C19orf44Q9H6X5 657 aa13.31□□□□□ -0.28
CLPX-205ENST00000559218 LRP6O75581 1613 aa13.31□□□□□ -0.28
CLPX-205ENST00000559218 PTPRUQ92729 1446 aa13.3□□□□□ -0.28
CLPX-205ENST00000559218 ATF3P18847 181 aa13.3□□□□□ -0.28
CLPX-205ENST00000559218 AMOTL2Q9Y2J4 779 aa13.3□□□□□ -0.28
CLPX-205ENST00000559218 IQGAP3Q86VI3 1631 aa13.29□□□□□ -0.28
CLPX-205ENST00000559218 CADPS2Q86UW7 1296 aa13.29□□□□□ -0.28
CLPX-205ENST00000559218 PIK3R4Q99570 1358 aa13.29□□□□□ -0.28
CLPX-205ENST00000559218 DIP2AQ14689 1571 aa13.28□□□□□ -0.28
CLPX-205ENST00000559218 SETD1AO15047 1707 aaKnown RBP13.27□□□□□ -0.28
CLPX-205ENST00000559218 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.27□□□□□ -0.28
CLPX-205ENST00000559218 MEX3CQ5U5Q3 659 aaKnown RBP13.27□□□□□ -0.29
CLPX-205ENST00000559218 BRINP3Q76B58 766 aa13.27□□□□□ -0.29
CLPX-205ENST00000559218 PPARGC1BQ86YN6 1023 aaKnown RBP13.27□□□□□ -0.29
CLPX-205ENST00000559218 SPATA31A6Q5VVP1 1343 aa13.27□□□□□ -0.29
CLPX-205ENST00000559218 TRPM2O94759 1503 aa13.26□□□□□ -0.29
CLPX-205ENST00000559218 AHDC1Q5TGY3 1603 aaPredicted RBP13.26□□□□□ -0.29
CLPX-205ENST00000559218 METP08581 1390 aa13.24□□□□□ -0.29
CLPX-205ENST00000559218 TRIM52Q96A61 297 aa13.24□□□□□ -0.29
CLPX-205ENST00000559218 NUTM2BA6NNL0 878 aaPredicted RBP13.23□□□□□ -0.29
CLPX-205ENST00000559218 NUTM2EB1AL46 878 aaPredicted RBP13.23□□□□□ -0.29
CLPX-205ENST00000559218 ZNF326Q5BKZ1 582 aaKnown RBP13.23□□□□□ -0.29
CLPX-205ENST00000559218 ZNF772Q68DY9 489 aaPredicted RBP13.23□□□□□ -0.29
CLPX-205ENST00000559218 NUTM2AQ8IVF1 878 aaPredicted RBP13.23□□□□□ -0.29
CLPX-205ENST00000559218 NRXN3Q9Y4C0 1643 aa13.23□□□□□ -0.29
CLPX-205ENST00000559218 SETBP1Q9Y6X0 1596 aa13.22□□□□□ -0.29
CLPX-205ENST00000559218 XRN1Q8IZH2 1706 aaKnown RBP13.22□□□□□ -0.29
CLPX-205ENST00000559218 DCCP43146 1447 aa13.22□□□□□ -0.29
CLPX-205ENST00000559218 MST1RQ04912 1400 aa13.22□□□□□ -0.29
CLPX-205ENST00000559218 DDX17Q92841 729 aaKnown RBP13.21□□□□□ -0.29
CLPX-205ENST00000559218 ASXL1Q8IXJ9 1541 aa13.21□□□□□ -0.29
CLPX-205ENST00000559218 SHPRHQ149N8 1683 aa13.21□□□□□ -0.3
CLPX-205ENST00000559218 UPF1Q92900 1129 aaKnown RBP eCLIP13.2□□□□□ -0.3
CLPX-205ENST00000559218 SRCAPQ6ZRS2 3230 aa13.19□□□□□ -0.3
CLPX-205ENST00000559218 AFF2P51816 1311 aa13.18□□□□□ -0.3
CLPX-205ENST00000559218 RXRBP28702 533 aa13.18□□□□□ -0.3
CLPX-205ENST00000559218 SETD5Q9C0A6 1442 aa13.18□□□□□ -0.3
CLPX-205ENST00000559218 SPHKAPQ2M3C7 1700 aa13.18□□□□□ -0.3
CLPX-205ENST00000559218 ADGRL3Q9HAR2 1447 aa13.17□□□□□ -0.3
CLPX-205ENST00000559218 CLTCL1P53675 1640 aa13.17□□□□□ -0.3
CLPX-205ENST00000559218 LRRC59Q96AG4 307 aaKnown RBP13.16□□□□□ -0.3
CLPX-205ENST00000559218 NEXMIFQ5QGS0 1516 aa13.16□□□□□ -0.3
CLPX-205ENST00000559218 C8orf37Q96NL8 207 aa13.15□□□□□ -0.3
CLPX-205ENST00000559218 PNPLA6Q8IY17 1366 aa13.15□□□□□ -0.3
CLPX-205ENST00000559218 NHSL1Q5SYE7 1610 aa13.14□□□□□ -0.31
CLPX-205ENST00000559218 C1orf167Q5SNV9 1468 aa13.13□□□□□ -0.31
CLPX-205ENST00000559218 ROBO2Q9HCK4 1378 aa13.13□□□□□ -0.31
CLPX-205ENST00000559218 NAIPQ13075 1403 aa13.13□□□□□ -0.31
CLPX-205ENST00000559218 CDK12Q9NYV4 1490 aaPredicted RBP13.12□□□□□ -0.31
CLPX-205ENST00000559218 QTRT2Q9H974 415 aaKnown RBP13.12□□□□□ -0.31
CLPX-205ENST00000559218 U3KPZ7 1027 aaPredicted RBP13.12□□□□□ -0.31
CLPX-205ENST00000559218 NALCNQ8IZF0 1738 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms