RNA–Protein interactions for RNA: ENST00000559207.1

CPNE6-212, Transcript of copine 6, humanhuman

TSL 3

Gene CPNE6, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-212ENST00000559207 BCANQ96GW7 911 aa17.79■□□□□ 0.44
CPNE6-212ENST00000559207 TMEM94Q12767 1356 aa17.79■□□□□ 0.44
CPNE6-212ENST00000559207 PROSER2Q86WR7 435 aaPredicted RBP17.78■□□□□ 0.44
CPNE6-212ENST00000559207 ZFYVE9O95405 1425 aa17.78■□□□□ 0.44
CPNE6-212ENST00000559207 GCC2Q8IWJ2 1684 aa17.77■□□□□ 0.44
CPNE6-212ENST00000559207 TMEM131LA2VDJ0 1609 aa17.76■□□□□ 0.43
CPNE6-212ENST00000559207 RIMS2Q9UQ26 1411 aa17.76■□□□□ 0.43
CPNE6-212ENST00000559207 CHGAP10645 457 aaKnown RBP17.76■□□□□ 0.43
CPNE6-212ENST00000559207 MYO5BQ9ULV0 1848 aa17.76■□□□□ 0.43
CPNE6-212ENST00000559207 E9PCH4 1651 aa17.75■□□□□ 0.43
CPNE6-212ENST00000559207 HDGFP51858 240 aaKnown RBP17.75■□□□□ 0.43
CPNE6-212ENST00000559207 NUP155O75694 1391 aa17.75■□□□□ 0.43
CPNE6-212ENST00000559207 PLEKHG1Q9ULL1 1385 aa17.75■□□□□ 0.43
CPNE6-212ENST00000559207 PPP1R15AO75807 674 aaPredicted RBP17.74■□□□□ 0.43
CPNE6-212ENST00000559207 IQGAP3Q86VI3 1631 aa17.73■□□□□ 0.43
CPNE6-212ENST00000559207 FAM135BQ49AJ0 1406 aa17.72■□□□□ 0.43
CPNE6-212ENST00000559207 NUTM2DQ5VT03 806 aaPredicted RBP17.72■□□□□ 0.43
CPNE6-212ENST00000559207 NWD1Q149M9 1564 aa17.71■□□□□ 0.43
CPNE6-212ENST00000559207 NKTRP30414 1462 aaKnown RBP17.71■□□□□ 0.43
CPNE6-212ENST00000559207 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.71■□□□□ 0.43
CPNE6-212ENST00000559207 TBX22Q9Y458 520 aa17.71■□□□□ 0.43
CPNE6-212ENST00000559207 CHD2O14647 1828 aaKnown RBP17.67■□□□□ 0.42
CPNE6-212ENST00000559207 MSH6P52701 1360 aa17.66■□□□□ 0.42
CPNE6-212ENST00000559207 ADAMTS13Q76LX8 1427 aa17.66■□□□□ 0.42
CPNE6-212ENST00000559207 SLAIN2Q9P270 581 aa17.65■□□□□ 0.42
CPNE6-212ENST00000559207 ROBO1Q9Y6N7 1651 aa17.64■□□□□ 0.41
CPNE6-212ENST00000559207 RRBP1Q9P2E9 1410 aaKnown RBP17.64■□□□□ 0.41
CPNE6-212ENST00000559207 RGS17Q9UGC6 210 aaPredicted RBP17.62■□□□□ 0.41
CPNE6-212ENST00000559207 PIK3R4Q99570 1358 aa17.61■□□□□ 0.41
CPNE6-212ENST00000559207 NAIPQ13075 1403 aa17.6■□□□□ 0.41
CPNE6-212ENST00000559207 NCOA3Q9Y6Q9 1424 aa17.6■□□□□ 0.41
CPNE6-212ENST00000559207 DIP2AQ14689 1571 aa17.6■□□□□ 0.41
CPNE6-212ENST00000559207 C14orf37Q86TY3 774 aa17.59■□□□□ 0.41
CPNE6-212ENST00000559207 AMOTL2Q9Y2J4 779 aa17.59■□□□□ 0.41
CPNE6-212ENST00000559207 SPHKAPQ2M3C7 1700 aa17.58■□□□□ 0.41
CPNE6-212ENST00000559207 PTPRUQ92729 1446 aa17.58■□□□□ 0.41
CPNE6-212ENST00000559207 ZNF326Q5BKZ1 582 aaKnown RBP17.58■□□□□ 0.4
CPNE6-212ENST00000559207 C19orf44Q9H6X5 657 aa17.57■□□□□ 0.4
CPNE6-212ENST00000559207 TRPM2O94759 1503 aa17.56■□□□□ 0.4
CPNE6-212ENST00000559207 ATF3P18847 181 aa17.54■□□□□ 0.4
CPNE6-212ENST00000559207 CADPS2Q86UW7 1296 aa17.54■□□□□ 0.4
CPNE6-212ENST00000559207 NRXN3Q9Y4C0 1643 aa17.54■□□□□ 0.4
CPNE6-212ENST00000559207 PHLPP1O60346 1717 aa17.53■□□□□ 0.4
CPNE6-212ENST00000559207 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.53■□□□□ 0.4
CPNE6-212ENST00000559207 CLTCL1P53675 1640 aa17.53■□□□□ 0.4
CPNE6-212ENST00000559207 SETBP1Q9Y6X0 1596 aa17.53■□□□□ 0.4
CPNE6-212ENST00000559207 METP08581 1390 aa17.53■□□□□ 0.4
CPNE6-212ENST00000559207 TRIM52Q96A61 297 aa17.52■□□□□ 0.4
CPNE6-212ENST00000559207 HFM1A2PYH4 1435 aa17.51■□□□□ 0.39
CPNE6-212ENST00000559207 POTEAQ6S8J7 498 aa17.51■□□□□ 0.39
CPNE6-212ENST00000559207 JCADQ9P266 1359 aa17.51■□□□□ 0.39
CPNE6-212ENST00000559207 NEXMIFQ5QGS0 1516 aa17.49■□□□□ 0.39
CPNE6-212ENST00000559207 COL16A1Q07092 1604 aaPredicted RBP17.48■□□□□ 0.39
CPNE6-212ENST00000559207 XRN1Q8IZH2 1706 aaKnown RBP17.48■□□□□ 0.39
CPNE6-212ENST00000559207 SLC4A1APQ9BWU0 796 aaKnown RBP17.48■□□□□ 0.39
CPNE6-212ENST00000559207 BRINP3Q76B58 766 aa17.47■□□□□ 0.39
CPNE6-212ENST00000559207 KIF1BO60333 1816 aa17.46■□□□□ 0.39
CPNE6-212ENST00000559207 DCCP43146 1447 aa17.45■□□□□ 0.38
CPNE6-212ENST00000559207 AHDC1Q5TGY3 1603 aaPredicted RBP17.44■□□□□ 0.38
CPNE6-212ENST00000559207 VGFO15240 615 aaPredicted RBP17.44■□□□□ 0.38
CPNE6-212ENST00000559207 SPATA31A6Q5VVP1 1343 aa17.43■□□□□ 0.38
CPNE6-212ENST00000559207 MST1RQ04912 1400 aa17.42■□□□□ 0.38
CPNE6-212ENST00000559207 FOXD1Q16676 465 aa17.42■□□□□ 0.38
CPNE6-212ENST00000559207 LRP6O75581 1613 aa17.41■□□□□ 0.38
CPNE6-212ENST00000559207 RPGRIP1LQ68CZ1 1315 aa17.41■□□□□ 0.38
CPNE6-212ENST00000559207 ADGRL3Q9HAR2 1447 aa17.39■□□□□ 0.38
CPNE6-212ENST00000559207 ASXL1Q8IXJ9 1541 aa17.39■□□□□ 0.37
CPNE6-212ENST00000559207 MEX3CQ5U5Q3 659 aaKnown RBP17.38■□□□□ 0.37
CPNE6-212ENST00000559207 SHPRHQ149N8 1683 aa17.37■□□□□ 0.37
CPNE6-212ENST00000559207 DDX17Q92841 729 aaKnown RBP17.37■□□□□ 0.37
CPNE6-212ENST00000559207 ROBO2Q9HCK4 1378 aa17.37■□□□□ 0.37
CPNE6-212ENST00000559207 SETD1AO15047 1707 aaKnown RBP17.36■□□□□ 0.37
CPNE6-212ENST00000559207 NALCNQ8IZF0 1738 aa17.36■□□□□ 0.37
CPNE6-212ENST00000559207 MPHOSPH9Q99550 1183 aa17.36■□□□□ 0.37
CPNE6-212ENST00000559207 SETD5Q9C0A6 1442 aa17.36■□□□□ 0.37
CPNE6-212ENST00000559207 NUTM2BA6NNL0 878 aaPredicted RBP17.35■□□□□ 0.37
CPNE6-212ENST00000559207 NUTM2EB1AL46 878 aaPredicted RBP17.35■□□□□ 0.37
CPNE6-212ENST00000559207 NUTM2AQ8IVF1 878 aaPredicted RBP17.35■□□□□ 0.37
CPNE6-212ENST00000559207 PTCH1Q13635 1447 aa17.35■□□□□ 0.37
CPNE6-212ENST00000559207 PPLO60437 1756 aa17.34■□□□□ 0.37
CPNE6-212ENST00000559207 LRRC59Q96AG4 307 aaKnown RBP17.34■□□□□ 0.37
CPNE6-212ENST00000559207 NHSL1Q5SYE7 1610 aa17.33■□□□□ 0.37
CPNE6-212ENST00000559207 C1orf167Q5SNV9 1468 aa17.33■□□□□ 0.37
CPNE6-212ENST00000559207 ADGRF5Q8IZF2 1346 aa17.33■□□□□ 0.36
CPNE6-212ENST00000559207 RGL3Q3MIN7 710 aa17.33■□□□□ 0.36
CPNE6-212ENST00000559207 ZNF772Q68DY9 489 aaPredicted RBP17.33■□□□□ 0.36
CPNE6-212ENST00000559207 PRAG1Q86YV5 1406 aa17.32■□□□□ 0.36
CPNE6-212ENST00000559207 CCDC144AA2RUR9 1427 aa17.31■□□□□ 0.36
CPNE6-212ENST00000559207 ORAI2Q96SN7 254 aa17.31■□□□□ 0.36
CPNE6-212ENST00000559207 SPATA31E1Q6ZUB1 1445 aa17.3■□□□□ 0.36
CPNE6-212ENST00000559207 PNPLA6Q8IY17 1366 aa17.28■□□□□ 0.36
CPNE6-212ENST00000559207 STK26Q9P289 416 aa17.27■□□□□ 0.36
CPNE6-212ENST00000559207 ANKRD30BQ9BXX2 1392 aa17.27■□□□□ 0.35
CPNE6-212ENST00000559207 AFF2P51816 1311 aa17.26■□□□□ 0.35
CPNE6-212ENST00000559207 SOS2Q07890 1332 aaPredicted RBP17.25■□□□□ 0.35
CPNE6-212ENST00000559207 RXRBP28702 533 aa17.25■□□□□ 0.35
CPNE6-212ENST00000559207 TMEM132EQ6IEE7 984 aa17.25■□□□□ 0.35
CPNE6-212ENST00000559207 WAPLQ7Z5K2 1190 aa17.25■□□□□ 0.35
CPNE6-212ENST00000559207 C8orf37Q96NL8 207 aa17.24■□□□□ 0.35
CPNE6-212ENST00000559207 LAMC1P11047 1609 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms