RNA–Protein interactions for RNA: ENST00000558729.5

PKNOX2-210, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 4

Gene PKNOX2, Length 604 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-210ENST00000558729 RIMS2Q9UQ26 1411 aa24.1■■□□□ 1.45
PKNOX2-210ENST00000558729 ZNF326Q5BKZ1 582 aaKnown RBP24.1■■□□□ 1.45
PKNOX2-210ENST00000558729 KIF1BO60333 1816 aa24.1■■□□□ 1.45
PKNOX2-210ENST00000558729 RPGRIP1LQ68CZ1 1315 aa24.1■■□□□ 1.45
PKNOX2-210ENST00000558729 DHX57Q6P158 1386 aaKnown RBP24.09■■□□□ 1.45
PKNOX2-210ENST00000558729 POLR1AO95602 1720 aaPredicted RBP24.09■■□□□ 1.45
PKNOX2-210ENST00000558729 LTKP29376 864 aa24.08■■□□□ 1.45
PKNOX2-210ENST00000558729 NPHP4O75161 1426 aaPredicted RBP24.08■■□□□ 1.44
PKNOX2-210ENST00000558729 PPP1R15AO75807 674 aaPredicted RBP24.06■■□□□ 1.44
PKNOX2-210ENST00000558729 SPATA31E1Q6ZUB1 1445 aa24.06■■□□□ 1.44
PKNOX2-210ENST00000558729 MYO5BQ9ULV0 1848 aa24.04■■□□□ 1.44
PKNOX2-210ENST00000558729 PLEKHG1Q9ULL1 1385 aa24.03■■□□□ 1.44
PKNOX2-210ENST00000558729 IQGAP1P46940 1657 aa24■■□□□ 1.43
PKNOX2-210ENST00000558729 VGFO15240 615 aaPredicted RBP24■■□□□ 1.43
PKNOX2-210ENST00000558729 NEXMIFQ5QGS0 1516 aa24■■□□□ 1.43
PKNOX2-210ENST00000558729 RGL3Q3MIN7 710 aa23.98■■□□□ 1.43
PKNOX2-210ENST00000558729 STAC3Q96MF2 364 aa23.97■■□□□ 1.43
PKNOX2-210ENST00000558729 BCANQ96GW7 911 aa23.96■■□□□ 1.43
PKNOX2-210ENST00000558729 ILDR2Q71H61 639 aa23.95■■□□□ 1.42
PKNOX2-210ENST00000558729 NUTM2DQ5VT03 806 aaPredicted RBP23.93■■□□□ 1.42
PKNOX2-210ENST00000558729 SOCS7O14512 581 aa23.92■■□□□ 1.42
PKNOX2-210ENST00000558729 TBX22Q9Y458 520 aa23.92■■□□□ 1.42
PKNOX2-210ENST00000558729 CLSPNQ9HAW4 1339 aa23.91■■□□□ 1.42
PKNOX2-210ENST00000558729 PPLO60437 1756 aa23.91■■□□□ 1.42
PKNOX2-210ENST00000558729 DIP2AQ14689 1571 aa23.91■■□□□ 1.42
PKNOX2-210ENST00000558729 SETBP1Q9Y6X0 1596 aa23.91■■□□□ 1.42
PKNOX2-210ENST00000558729 MYOM2P54296 1465 aa23.89■■□□□ 1.42
PKNOX2-210ENST00000558729 DISP3Q9P2K9 1392 aa23.89■■□□□ 1.41
PKNOX2-210ENST00000558729 ADAMTS13Q76LX8 1427 aa23.88■■□□□ 1.41
PKNOX2-210ENST00000558729 SLC26A8Q96RN1 970 aa23.88■■□□□ 1.41
PKNOX2-210ENST00000558729 PIK3R4Q99570 1358 aa23.88■■□□□ 1.41
PKNOX2-210ENST00000558729 IFT172Q9UG01 1749 aa23.86■■□□□ 1.41
PKNOX2-210ENST00000558729 SIN3AQ96ST3 1273 aa23.85■■□□□ 1.41
PKNOX2-210ENST00000558729 ZNF335Q9H4Z2 1342 aaPredicted RBP23.84■■□□□ 1.41
PKNOX2-210ENST00000558729 DCAF11Q8TEB1 546 aa23.84■■□□□ 1.41
PKNOX2-210ENST00000558729 ADGRF5Q8IZF2 1346 aa23.84■■□□□ 1.41
PKNOX2-210ENST00000558729 NEUROD1Q13562 356 aa23.83■■□□□ 1.41
PKNOX2-210ENST00000558729 NRXN1Q9ULB1 1477 aa23.82■■□□□ 1.4
PKNOX2-210ENST00000558729 KCNA6P17658 529 aa23.82■■□□□ 1.4
PKNOX2-210ENST00000558729 CPS1P31327 1500 aa23.82■■□□□ 1.4
PKNOX2-210ENST00000558729 PIK3C2GO75747 1445 aa23.82■■□□□ 1.4
PKNOX2-210ENST00000558729 NRXN3Q9Y4C0 1643 aa23.81■■□□□ 1.4
PKNOX2-210ENST00000558729 LTBP4Q8N2S1 1624 aa23.8■■□□□ 1.4
PKNOX2-210ENST00000558729 CERKQ8TCT0 537 aa23.79■■□□□ 1.4
PKNOX2-210ENST00000558729 CCER1Q8TC90 406 aaPredicted RBP23.78■■□□□ 1.4
PKNOX2-210ENST00000558729 ALKQ9UM73 1620 aa23.77■■□□□ 1.4
PKNOX2-210ENST00000558729 SENP3Q9H4L4 574 aaPredicted RBP23.77■■□□□ 1.4
PKNOX2-210ENST00000558729 KDM2AQ9Y2K7 1162 aa23.77■■□□□ 1.4
PKNOX2-210ENST00000558729 L3MBTL2Q969R5 705 aa23.76■■□□□ 1.39
PKNOX2-210ENST00000558729 NWD1Q149M9 1564 aa23.76■■□□□ 1.39
PKNOX2-210ENST00000558729 C14orf93Q9H972 538 aaKnown RBP23.75■■□□□ 1.39
PKNOX2-210ENST00000558729 TONSLQ96HA7 1378 aa23.75■■□□□ 1.39
PKNOX2-210ENST00000558729 NKTRP30414 1462 aaKnown RBP23.75■■□□□ 1.39
PKNOX2-210ENST00000558729 METP08581 1390 aa23.74■■□□□ 1.39
PKNOX2-210ENST00000558729 IQSEC2Q5JU85 1478 aa23.74■■□□□ 1.39
PKNOX2-210ENST00000558729 LAMC1P11047 1609 aa23.73■■□□□ 1.39
PKNOX2-210ENST00000558729 TIMELESSQ9UNS1 1208 aa23.72■■□□□ 1.39
PKNOX2-210ENST00000558729 AMOTL2Q9Y2J4 779 aa23.71■■□□□ 1.39
PKNOX2-210ENST00000558729 CHD2O14647 1828 aaKnown RBP23.7■■□□□ 1.38
PKNOX2-210ENST00000558729 SETD1AO15047 1707 aaKnown RBP23.7■■□□□ 1.38
PKNOX2-210ENST00000558729 PRAG1Q86YV5 1406 aa23.68■■□□□ 1.38
PKNOX2-210ENST00000558729 PTPRUQ92729 1446 aa23.68■■□□□ 1.38
PKNOX2-210ENST00000558729 CFAP70Q5T0N1 1121 aa23.68■■□□□ 1.38
PKNOX2-210ENST00000558729 LRRC7Q96NW7 1537 aa23.68■■□□□ 1.38
PKNOX2-210ENST00000558729 PROSER2Q86WR7 435 aaPredicted RBP23.67■■□□□ 1.38
PKNOX2-210ENST00000558729 NCOA3Q9Y6Q9 1424 aa23.67■■□□□ 1.38
PKNOX2-210ENST00000558729 STRCP1A6NGW2 1772 aa23.66■■□□□ 1.38
PKNOX2-210ENST00000558729 LRPPRCP42704 1394 aaKnown RBP23.65■■□□□ 1.38
PKNOX2-210ENST00000558729 XRN1Q8IZH2 1706 aaKnown RBP23.64■■□□□ 1.38
PKNOX2-210ENST00000558729 PTCH1Q13635 1447 aa23.64■■□□□ 1.37
PKNOX2-210ENST00000558729 ABCC11Q96J66 1382 aa23.64■■□□□ 1.37
PKNOX2-210ENST00000558729 TECPR2O15040 1411 aa23.62■■□□□ 1.37
PKNOX2-210ENST00000558729 TMEM94Q12767 1356 aa23.62■■□□□ 1.37
PKNOX2-210ENST00000558729 KIAA1210Q9ULL0 1709 aa23.62■■□□□ 1.37
PKNOX2-210ENST00000558729 YTHDC2Q9H6S0 1430 aaKnown RBP23.61■■□□□ 1.37
PKNOX2-210ENST00000558729 ASXL1Q8IXJ9 1541 aa23.61■■□□□ 1.37
PKNOX2-210ENST00000558729 TMEM132EQ6IEE7 984 aa23.61■■□□□ 1.37
PKNOX2-210ENST00000558729 SIRT1Q96EB6 747 aa23.61■■□□□ 1.37
PKNOX2-210ENST00000558729 ADGRB1O14514 1584 aa23.59■■□□□ 1.37
PKNOX2-210ENST00000558729 STK26Q9P289 416 aa23.56■■□□□ 1.36
PKNOX2-210ENST00000558729 FAM135BQ49AJ0 1406 aa23.56■■□□□ 1.36
PKNOX2-210ENST00000558729 MSH6P52701 1360 aa23.55■■□□□ 1.36
PKNOX2-210ENST00000558729 ROBO2Q9HCK4 1378 aa23.55■■□□□ 1.36
PKNOX2-210ENST00000558729 KNDC1Q76NI1 1749 aa23.55■■□□□ 1.36
PKNOX2-210ENST00000558729 DLC1Q96QB1 1528 aa23.54■■□□□ 1.36
PKNOX2-210ENST00000558729 C14orf37Q86TY3 774 aa23.53■■□□□ 1.36
PKNOX2-210ENST00000558729 C19orf44Q9H6X5 657 aa23.53■■□□□ 1.36
PKNOX2-210ENST00000558729 TOM1O60784 492 aa23.52■■□□□ 1.36
PKNOX2-210ENST00000558729 NBPF8Q3BBV2 869 aa23.51■■□□□ 1.35
PKNOX2-210ENST00000558729 DCCP43146 1447 aa23.5■■□□□ 1.35
PKNOX2-210ENST00000558729 NBPF1Q3BBV0 1214 aa23.5■■□□□ 1.35
PKNOX2-210ENST00000558729 RBM33Q96EV2 1170 aaKnown RBP23.5■■□□□ 1.35
PKNOX2-210ENST00000558729 TRPM1Q7Z4N2 1603 aa23.5■■□□□ 1.35
PKNOX2-210ENST00000558729 ROCK2O75116 1388 aaKnown RBP23.5■■□□□ 1.35
PKNOX2-210ENST00000558729 ADGRL3Q9HAR2 1447 aa23.5■■□□□ 1.35
PKNOX2-210ENST00000558729 TRAK1Q9UPV9 953 aa23.49■■□□□ 1.35
PKNOX2-210ENST00000558729 GPRASP1Q5JY77 1395 aa23.49■■□□□ 1.35
PKNOX2-210ENST00000558729 RALGAPBQ86X10 1494 aa23.49■■□□□ 1.35
PKNOX2-210ENST00000558729 XIRP1Q702N8 1843 aaKnown RBP23.48■■□□□ 1.35
PKNOX2-210ENST00000558729 CADPS2Q86UW7 1296 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms