RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 NKTRP30414 1462 aaKnown RBP20.41■□□□□ 0.86
TMED3-205ENST00000558562 NWD1Q149M9 1564 aa20.4■□□□□ 0.86
TMED3-205ENST00000558562 ADGRB3O60242 1522 aa20.39■□□□□ 0.85
TMED3-205ENST00000558562 LMTK2Q8IWU2 1503 aa20.39■□□□□ 0.85
TMED3-205ENST00000558562 NOS1P29475 1434 aa20.38■□□□□ 0.85
TMED3-205ENST00000558562 JCADQ9P266 1359 aa20.38■□□□□ 0.85
TMED3-205ENST00000558562 ANKRD30AQ9BXX3 1397 aa20.35■□□□□ 0.85
TMED3-205ENST00000558562 SLC52A1Q9NWF4 448 aa20.34■□□□□ 0.85
TMED3-205ENST00000558562 LRP6O75581 1613 aa20.32■□□□□ 0.84
TMED3-205ENST00000558562 COL16A1Q07092 1604 aaPredicted RBP20.32■□□□□ 0.84
TMED3-205ENST00000558562 PPP1R15AO75807 674 aaPredicted RBP20.32■□□□□ 0.84
TMED3-205ENST00000558562 CHD2O14647 1828 aaKnown RBP20.32■□□□□ 0.84
TMED3-205ENST00000558562 MYO5BQ9ULV0 1848 aa20.32■□□□□ 0.84
TMED3-205ENST00000558562 ZFYVE9O95405 1425 aa20.31■□□□□ 0.84
TMED3-205ENST00000558562 FGD6Q6ZV73 1430 aa20.31■□□□□ 0.84
TMED3-205ENST00000558562 MEX3CQ5U5Q3 659 aaKnown RBP20.31■□□□□ 0.84
TMED3-205ENST00000558562 C14orf37Q86TY3 774 aa20.31■□□□□ 0.84
TMED3-205ENST00000558562 TRIM52Q96A61 297 aa20.31■□□□□ 0.84
TMED3-205ENST00000558562 PLEKHG1Q9ULL1 1385 aa20.31■□□□□ 0.84
TMED3-205ENST00000558562 RIMS2Q9UQ26 1411 aa20.29■□□□□ 0.84
TMED3-205ENST00000558562 RRBP1Q9P2E9 1410 aaKnown RBP20.28■□□□□ 0.84
TMED3-205ENST00000558562 UPF1Q92900 1129 aaKnown RBP eCLIP20.28■□□□□ 0.843e-8■■■■■ 35
TMED3-205ENST00000558562 GCC2Q8IWJ2 1684 aa20.27■□□□□ 0.84
TMED3-205ENST00000558562 NUTM2DQ5VT03 806 aaPredicted RBP20.27■□□□□ 0.84
TMED3-205ENST00000558562 SPATA31A6Q5VVP1 1343 aa20.27■□□□□ 0.83
TMED3-205ENST00000558562 CHGAP10645 457 aaKnown RBP20.26■□□□□ 0.83
TMED3-205ENST00000558562 ZNF772Q68DY9 489 aaPredicted RBP20.26■□□□□ 0.83
TMED3-205ENST00000558562 HDGFP51858 240 aaKnown RBP20.25■□□□□ 0.83
TMED3-205ENST00000558562 TBX22Q9Y458 520 aa20.25■□□□□ 0.83
TMED3-205ENST00000558562 TMEM131LA2VDJ0 1609 aa20.24■□□□□ 0.83
TMED3-205ENST00000558562 RPRD2Q5VT52 1461 aaKnown RBP20.24■□□□□ 0.83
TMED3-205ENST00000558562 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.23■□□□□ 0.83
TMED3-205ENST00000558562 ATF3P18847 181 aa20.22■□□□□ 0.83
TMED3-205ENST00000558562 CADPS2Q86UW7 1296 aa20.22■□□□□ 0.83
TMED3-205ENST00000558562 NCOA3Q9Y6Q9 1424 aa20.21■□□□□ 0.83
TMED3-205ENST00000558562 AHDC1Q5TGY3 1603 aaPredicted RBP20.21■□□□□ 0.83
TMED3-205ENST00000558562 NUTM2BA6NNL0 878 aaPredicted RBP20.21■□□□□ 0.83
TMED3-205ENST00000558562 NUTM2EB1AL46 878 aaPredicted RBP20.21■□□□□ 0.83
TMED3-205ENST00000558562 NUTM2AQ8IVF1 878 aaPredicted RBP20.21■□□□□ 0.83
TMED3-205ENST00000558562 C19orf44Q9H6X5 657 aa20.21■□□□□ 0.83
TMED3-205ENST00000558562 ADAMTS13Q76LX8 1427 aa20.2■□□□□ 0.82
TMED3-205ENST00000558562 ANKRD50Q9ULJ7 1429 aa20.2■□□□□ 0.82
TMED3-205ENST00000558562 SHPRHQ149N8 1683 aa20.2■□□□□ 0.82
TMED3-205ENST00000558562 ADGRL2O95490 1459 aa20.2■□□□□ 0.82
TMED3-205ENST00000558562 RXRBP28702 533 aa20.2■□□□□ 0.82
TMED3-205ENST00000558562 FAM50AQ14320 339 aaKnown RBP20.19■□□□□ 0.82
TMED3-205ENST00000558562 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.19■□□□□ 0.82
TMED3-205ENST00000558562 BRINP3Q76B58 766 aa20.17■□□□□ 0.82
TMED3-205ENST00000558562 HRCP23327 699 aa20.16■□□□□ 0.82
TMED3-205ENST00000558562 AMOTL2Q9Y2J4 779 aa20.15■□□□□ 0.82
TMED3-205ENST00000558562 DIP2AQ14689 1571 aa20.15■□□□□ 0.82
TMED3-205ENST00000558562 PTPRUQ92729 1446 aa20.13■□□□□ 0.81
TMED3-205ENST00000558562 PIK3R4Q99570 1358 aa20.13■□□□□ 0.81
TMED3-205ENST00000558562 AFF2P51816 1311 aa20.13■□□□□ 0.81
TMED3-205ENST00000558562 E9PCH4 1651 aa20.12■□□□□ 0.81
TMED3-205ENST00000558562 TRPM2O94759 1503 aa20.11■□□□□ 0.81
TMED3-205ENST00000558562 UNC13BO14795 1591 aa20.09■□□□□ 0.81
TMED3-205ENST00000558562 ASXL1Q8IXJ9 1541 aa20.09■□□□□ 0.81
TMED3-205ENST00000558562 CDK12Q9NYV4 1490 aaPredicted RBP20.09■□□□□ 0.81
TMED3-205ENST00000558562 SRCAPQ6ZRS2 3230 aa20.08■□□□□ 0.81
TMED3-205ENST00000558562 DDX17Q92841 729 aaKnown RBP20.08■□□□□ 0.81
TMED3-205ENST00000558562 C8orf37Q96NL8 207 aa20.07■□□□□ 0.8
TMED3-205ENST00000558562 SETD5Q9C0A6 1442 aa20.06■□□□□ 0.8
TMED3-205ENST00000558562 MST1RQ04912 1400 aa20.05■□□□□ 0.8
TMED3-205ENST00000558562 QTRT2Q9H974 415 aaKnown RBP20.05■□□□□ 0.8
TMED3-205ENST00000558562 RGS12O14924 1447 aa20.04■□□□□ 0.8
TMED3-205ENST00000558562 DCCP43146 1447 aa20.04■□□□□ 0.8
TMED3-205ENST00000558562 LRRC59Q96AG4 307 aaKnown RBP20.04■□□□□ 0.8
TMED3-205ENST00000558562 NHSL1Q5SYE7 1610 aa20.03■□□□□ 0.8
TMED3-205ENST00000558562 NRXN3Q9Y4C0 1643 aa20.02■□□□□ 0.8
TMED3-205ENST00000558562 XRN1Q8IZH2 1706 aaKnown RBP20.02■□□□□ 0.8
TMED3-205ENST00000558562 IQGAP3Q86VI3 1631 aa20.02■□□□□ 0.79
TMED3-205ENST00000558562 METP08581 1390 aa20.01■□□□□ 0.79
TMED3-205ENST00000558562 RBM6P78332 1123 aaKnown RBP20.01■□□□□ 0.79
TMED3-205ENST00000558562 NUP155O75694 1391 aa20■□□□□ 0.79
TMED3-205ENST00000558562 PNPLA6Q8IY17 1366 aa20■□□□□ 0.79
TMED3-205ENST00000558562 ADAMTS2O95450 1211 aa20■□□□□ 0.79
TMED3-205ENST00000558562 ZNF326Q5BKZ1 582 aaKnown RBP19.99■□□□□ 0.79
TMED3-205ENST00000558562 NGLY1Q96IV0 654 aa19.98■□□□□ 0.79
TMED3-205ENST00000558562 SETBP1Q9Y6X0 1596 aa19.98■□□□□ 0.79
TMED3-205ENST00000558562 ITGAEP38570 1179 aa19.97■□□□□ 0.79
TMED3-205ENST00000558562 ADGRL3Q9HAR2 1447 aa19.95■□□□□ 0.78
TMED3-205ENST00000558562 ZEB1P37275 1124 aaPredicted RBP19.95■□□□□ 0.78
TMED3-205ENST00000558562 CCER1Q8TC90 406 aaPredicted RBP19.95■□□□□ 0.78
TMED3-205ENST00000558562 ROCK1Q13464 1354 aa19.95■□□□□ 0.78
TMED3-205ENST00000558562 NALCNQ8IZF0 1738 aa19.94■□□□□ 0.78
TMED3-205ENST00000558562 C1orf167Q5SNV9 1468 aa19.91■□□□□ 0.78
TMED3-205ENST00000558562 SPHKAPQ2M3C7 1700 aa19.9■□□□□ 0.78
TMED3-205ENST00000558562 USP21Q9UK80 565 aa19.9■□□□□ 0.78
TMED3-205ENST00000558562 ATAD2Q6PL18 1390 aa19.9■□□□□ 0.78
TMED3-205ENST00000558562 ORAI2Q96SN7 254 aa19.89■□□□□ 0.77
TMED3-205ENST00000558562 NEXMIFQ5QGS0 1516 aa19.86■□□□□ 0.77
TMED3-205ENST00000558562 TRPC5Q9UL62 973 aaPredicted RBP19.86■□□□□ 0.77
TMED3-205ENST00000558562 SOS2Q07890 1332 aaPredicted RBP19.85■□□□□ 0.77
TMED3-205ENST00000558562 EP400Q96L91 3159 aa19.85■□□□□ 0.77
TMED3-205ENST00000558562 CLTCL1P53675 1640 aa19.84■□□□□ 0.77
TMED3-205ENST00000558562 LAMC1P11047 1609 aa19.84■□□□□ 0.77
TMED3-205ENST00000558562 ROBO2Q9HCK4 1378 aa19.83■□□□□ 0.77
TMED3-205ENST00000558562 FNBP4Q8N3X1 1017 aaPredicted RBP19.83■□□□□ 0.77
TMED3-205ENST00000558562 ZRANB1Q9UGI0 708 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 317.5 ms