RNA–Protein interactions for RNA: ENST00000558488.1

RNF213-206, Transcript of ring finger protein 213, humanhuman

TSL 3

Gene RNF213, Length 526 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-206ENST00000558488 A2ML1A8K2U0 1454 aa26.06■■□□□ 1.76
RNF213-206ENST00000558488 ALKQ9UM73 1620 aa26.06■■□□□ 1.76
RNF213-206ENST00000558488 SIN3AQ96ST3 1273 aa26.05■■□□□ 1.76
RNF213-206ENST00000558488 TMEM131LA2VDJ0 1609 aa26.04■■□□□ 1.76
RNF213-206ENST00000558488 TIMELESSQ9UNS1 1208 aa26.04■■□□□ 1.76
RNF213-206ENST00000558488 POLR1AO95602 1720 aaPredicted RBP26.02■■□□□ 1.76
RNF213-206ENST00000558488 UBR1Q8IWV7 1749 aa26■■□□□ 1.75
RNF213-206ENST00000558488 NEUROD1Q13562 356 aa25.99■■□□□ 1.75
RNF213-206ENST00000558488 TONSLQ96HA7 1378 aa25.98■■□□□ 1.75
RNF213-206ENST00000558488 RPGRIP1LQ68CZ1 1315 aa25.96■■□□□ 1.75
RNF213-206ENST00000558488 STAG3Q9UJ98 1225 aa25.95■■□□□ 1.74
RNF213-206ENST00000558488 STAC3Q96MF2 364 aa25.94■■□□□ 1.74
RNF213-206ENST00000558488 CHGAP10645 457 aaKnown RBP25.93■■□□□ 1.74
RNF213-206ENST00000558488 CPS1P31327 1500 aa25.93■■□□□ 1.74
RNF213-206ENST00000558488 SLIT1O75093 1534 aa25.92■■□□□ 1.74
RNF213-206ENST00000558488 IFT172Q9UG01 1749 aa25.91■■□□□ 1.74
RNF213-206ENST00000558488 THEMISQ8N1K5 641 aaPredicted RBP25.91■■□□□ 1.74
RNF213-206ENST00000558488 NEXMIFQ5QGS0 1516 aa25.91■■□□□ 1.74
RNF213-206ENST00000558488 MYOM2P54296 1465 aa25.91■■□□□ 1.74
RNF213-206ENST00000558488 ARHGAP23Q9P227 1491 aa25.91■■□□□ 1.74
RNF213-206ENST00000558488 STRCP1A6NGW2 1772 aa25.9■■□□□ 1.74
RNF213-206ENST00000558488 TOM1O60784 492 aa25.9■■□□□ 1.74
RNF213-206ENST00000558488 MYO5BQ9ULV0 1848 aa25.9■■□□□ 1.74
RNF213-206ENST00000558488 ZEB1P37275 1124 aaPredicted RBP25.89■■□□□ 1.74
RNF213-206ENST00000558488 TMEM2Q9UHN6 1383 aa25.89■■□□□ 1.74
RNF213-206ENST00000558488 ZFYVE9O95405 1425 aa25.88■■□□□ 1.73
RNF213-206ENST00000558488 SENP3Q9H4L4 574 aaPredicted RBP25.88■■□□□ 1.73
RNF213-206ENST00000558488 PPLO60437 1756 aa25.87■■□□□ 1.73
RNF213-206ENST00000558488 RGL3Q3MIN7 710 aa25.87■■□□□ 1.73
RNF213-206ENST00000558488 ZNF326Q5BKZ1 582 aaKnown RBP25.87■■□□□ 1.73
RNF213-206ENST00000558488 L3MBTL2Q969R5 705 aa25.87■■□□□ 1.73
RNF213-206ENST00000558488 PHF23Q9BUL5 403 aaPredicted RBP25.86■■□□□ 1.73
RNF213-206ENST00000558488 RIMS2Q9UQ26 1411 aa25.86■■□□□ 1.73
RNF213-206ENST00000558488 HDGFP51858 240 aaKnown RBP25.85■■□□□ 1.73
RNF213-206ENST00000558488 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.84■■□□□ 1.73
RNF213-206ENST00000558488 NRXN1Q9ULB1 1477 aa25.83■■□□□ 1.73
RNF213-206ENST00000558488 DCAF11Q8TEB1 546 aa25.81■■□□□ 1.72
RNF213-206ENST00000558488 RGS17Q9UGC6 210 aaPredicted RBP25.81■■□□□ 1.72
RNF213-206ENST00000558488 VGFO15240 615 aaPredicted RBP25.8■■□□□ 1.72
RNF213-206ENST00000558488 SCAF11Q99590 1463 aaKnown RBP25.79■■□□□ 1.72
RNF213-206ENST00000558488 EID1Q9Y6B2 187 aa25.77■■□□□ 1.72
RNF213-206ENST00000558488 PRAG1Q86YV5 1406 aa25.77■■□□□ 1.72
RNF213-206ENST00000558488 PPP1R15AO75807 674 aaPredicted RBP25.76■■□□□ 1.71
RNF213-206ENST00000558488 PIK3C2GO75747 1445 aa25.75■■□□□ 1.71
RNF213-206ENST00000558488 IQGAP1P46940 1657 aa25.74■■□□□ 1.71
RNF213-206ENST00000558488 LRRC7Q96NW7 1537 aa25.73■■□□□ 1.71
RNF213-206ENST00000558488 MED14O60244 1454 aa25.73■■□□□ 1.71
RNF213-206ENST00000558488 NPHP4O75161 1426 aaPredicted RBP25.73■■□□□ 1.71
RNF213-206ENST00000558488 PLEKHG1Q9ULL1 1385 aa25.73■■□□□ 1.71
RNF213-206ENST00000558488 SETBP1Q9Y6X0 1596 aa25.73■■□□□ 1.71
RNF213-206ENST00000558488 TXNDC2Q86VQ3 553 aa25.72■■□□□ 1.71
RNF213-206ENST00000558488 ANKLE2Q86XL3 938 aa25.72■■□□□ 1.71
RNF213-206ENST00000558488 LAMC1P11047 1609 aa25.71■■□□□ 1.71
RNF213-206ENST00000558488 ADGRF5Q8IZF2 1346 aa25.71■■□□□ 1.71
RNF213-206ENST00000558488 KDM2AQ9Y2K7 1162 aa25.71■■□□□ 1.71
RNF213-206ENST00000558488 LTKP29376 864 aa25.7■■□□□ 1.7
RNF213-206ENST00000558488 KIAA1210Q9ULL0 1709 aa25.7■■□□□ 1.7
RNF213-206ENST00000558488 XIRP1Q702N8 1843 aaKnown RBP25.69■■□□□ 1.7
RNF213-206ENST00000558488 RALGAPBQ86X10 1494 aa25.67■■□□□ 1.7
RNF213-206ENST00000558488 DIP2AQ14689 1571 aa25.66■■□□□ 1.7
RNF213-206ENST00000558488 TRPM1Q7Z4N2 1603 aa25.66■■□□□ 1.7
RNF213-206ENST00000558488 NRXN3Q9Y4C0 1643 aa25.66■■□□□ 1.7
RNF213-206ENST00000558488 NBPF8Q3BBV2 869 aa25.64■■□□□ 1.7
RNF213-206ENST00000558488 NUTM2DQ5VT03 806 aaPredicted RBP25.64■■□□□ 1.7
RNF213-206ENST00000558488 C14orf93Q9H972 538 aaKnown RBP25.62■■□□□ 1.69
RNF213-206ENST00000558488 ADAMTS13Q76LX8 1427 aa25.62■■□□□ 1.69
RNF213-206ENST00000558488 SETD1AO15047 1707 aaKnown RBP25.6■■□□□ 1.69
RNF213-206ENST00000558488 GPRASP1Q5JY77 1395 aa25.6■■□□□ 1.69
RNF213-206ENST00000558488 POTEAQ6S8J7 498 aa25.59■■□□□ 1.69
RNF213-206ENST00000558488 ADGRB1O14514 1584 aa25.56■■□□□ 1.68
RNF213-206ENST00000558488 TBX22Q9Y458 520 aa25.56■■□□□ 1.68
RNF213-206ENST00000558488 ASXL1Q8IXJ9 1541 aa25.55■■□□□ 1.68
RNF213-206ENST00000558488 CFAP70Q5T0N1 1121 aa25.55■■□□□ 1.68
RNF213-206ENST00000558488 ROCK2O75116 1388 aaKnown RBP25.55■■□□□ 1.68
RNF213-206ENST00000558488 PIK3R4Q99570 1358 aa25.55■■□□□ 1.68
RNF213-206ENST00000558488 BCANQ96GW7 911 aa25.53■■□□□ 1.68
RNF213-206ENST00000558488 NBPF1Q3BBV0 1214 aa25.48■■□□□ 1.67
RNF213-206ENST00000558488 METP08581 1390 aa25.47■■□□□ 1.67
RNF213-206ENST00000558488 SLC26A8Q96RN1 970 aa25.47■■□□□ 1.67
RNF213-206ENST00000558488 LRPPRCP42704 1394 aaKnown RBP25.46■■□□□ 1.67
RNF213-206ENST00000558488 TECPR2O15040 1411 aa25.46■■□□□ 1.67
RNF213-206ENST00000558488 YTHDC2Q9H6S0 1430 aaKnown RBP25.46■■□□□ 1.67
RNF213-206ENST00000558488 CARD11Q9BXL7 1154 aa25.45■■□□□ 1.66
RNF213-206ENST00000558488 KNDC1Q76NI1 1749 aa25.45■■□□□ 1.66
RNF213-206ENST00000558488 DLC1Q96QB1 1528 aa25.44■■□□□ 1.66
RNF213-206ENST00000558488 NWD1Q149M9 1564 aa25.44■■□□□ 1.66
RNF213-206ENST00000558488 ABCC11Q96J66 1382 aa25.44■■□□□ 1.66
RNF213-206ENST00000558488 XRN1Q8IZH2 1706 aaKnown RBP25.43■■□□□ 1.66
RNF213-206ENST00000558488 TMEM132EQ6IEE7 984 aa25.41■■□□□ 1.66
RNF213-206ENST00000558488 EIF3AQ14152 1382 aaKnown RBP25.41■■□□□ 1.66
RNF213-206ENST00000558488 ROBO1Q9Y6N7 1651 aa25.4■■□□□ 1.66
RNF213-206ENST00000558488 PTCH1Q13635 1447 aa25.39■■□□□ 1.66
RNF213-206ENST00000558488 PTPRUQ92729 1446 aa25.39■■□□□ 1.66
RNF213-206ENST00000558488 FAM135BQ49AJ0 1406 aa25.38■■□□□ 1.65
RNF213-206ENST00000558488 CHD2O14647 1828 aaKnown RBP25.38■■□□□ 1.65
RNF213-206ENST00000558488 SIRT1Q96EB6 747 aa25.38■■□□□ 1.65
RNF213-206ENST00000558488 USP47Q96K76 1375 aa25.38■■□□□ 1.65
RNF213-206ENST00000558488 NKTRP30414 1462 aaKnown RBP25.37■■□□□ 1.65
RNF213-206ENST00000558488 ARHGEF28Q8N1W1 1705 aaKnown RBP25.36■■□□□ 1.65
RNF213-206ENST00000558488 KCNA6P17658 529 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms