RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 RIMS2Q9UQ26 1411 aa18.61■□□□□ 0.57
CDC42BPB-202ENST00000558321 LRRC7Q96NW7 1537 aa18.6■□□□□ 0.57
CDC42BPB-202ENST00000558321 KCNA6P17658 529 aa18.6■□□□□ 0.57
CDC42BPB-202ENST00000558321 NUTM2DQ5VT03 806 aaPredicted RBP18.6■□□□□ 0.57
CDC42BPB-202ENST00000558321 PROSER2Q86WR7 435 aaPredicted RBP18.58■□□□□ 0.56
CDC42BPB-202ENST00000558321 STRCP1A6NGW2 1772 aa18.58■□□□□ 0.56
CDC42BPB-202ENST00000558321 TMEM131LA2VDJ0 1609 aa18.57■□□□□ 0.56
CDC42BPB-202ENST00000558321 ZFYVE9O95405 1425 aa18.57■□□□□ 0.56
CDC42BPB-202ENST00000558321 PLEKHG1Q9ULL1 1385 aa18.56■□□□□ 0.56
CDC42BPB-202ENST00000558321 ZNF326Q5BKZ1 582 aaKnown RBP18.56■□□□□ 0.56
CDC42BPB-202ENST00000558321 HFM1A2PYH4 1435 aa18.56■□□□□ 0.56
CDC42BPB-202ENST00000558321 DISP3Q9P2K9 1392 aa18.55■□□□□ 0.56
CDC42BPB-202ENST00000558321 HSPA1LP34931 641 aa18.55■□□□□ 0.56
CDC42BPB-202ENST00000558321 SLC4A1APQ9BWU0 796 aaKnown RBP18.54■□□□□ 0.56
CDC42BPB-202ENST00000558321 RBM33Q96EV2 1170 aaKnown RBP18.53■□□□□ 0.56
CDC42BPB-202ENST00000558321 TBX22Q9Y458 520 aa18.53■□□□□ 0.56
CDC42BPB-202ENST00000558321 MYO5BQ9ULV0 1848 aa18.53■□□□□ 0.56
CDC42BPB-202ENST00000558321 TMEM94Q12767 1356 aa18.52■□□□□ 0.55
CDC42BPB-202ENST00000558321 SPHKAPQ2M3C7 1700 aa18.47■□□□□ 0.55
CDC42BPB-202ENST00000558321 ALKQ9UM73 1620 aa18.45■□□□□ 0.54
CDC42BPB-202ENST00000558321 C14orf37Q86TY3 774 aa18.45■□□□□ 0.54
CDC42BPB-202ENST00000558321 NKTRP30414 1462 aaKnown RBP18.45■□□□□ 0.54
CDC42BPB-202ENST00000558321 MSH6P52701 1360 aa18.43■□□□□ 0.54
CDC42BPB-202ENST00000558321 ADAMTS13Q76LX8 1427 aa18.43■□□□□ 0.54
CDC42BPB-202ENST00000558321 FOXD1Q16676 465 aa18.43■□□□□ 0.54
CDC42BPB-202ENST00000558321 TRPM2O94759 1503 aa18.43■□□□□ 0.54
CDC42BPB-202ENST00000558321 MPHOSPH9Q99550 1183 aa18.42■□□□□ 0.54
CDC42BPB-202ENST00000558321 AMOTL2Q9Y2J4 779 aa18.42■□□□□ 0.54
CDC42BPB-202ENST00000558321 PIK3R4Q99570 1358 aa18.42■□□□□ 0.54
CDC42BPB-202ENST00000558321 CLTCL1P53675 1640 aa18.41■□□□□ 0.54
CDC42BPB-202ENST00000558321 XIRP1Q702N8 1843 aaKnown RBP18.41■□□□□ 0.54
CDC42BPB-202ENST00000558321 NWD1Q149M9 1564 aa18.41■□□□□ 0.54
CDC42BPB-202ENST00000558321 DIP2AQ14689 1571 aa18.39■□□□□ 0.53
CDC42BPB-202ENST00000558321 VGFO15240 615 aaPredicted RBP18.39■□□□□ 0.53
CDC42BPB-202ENST00000558321 SLAIN2Q9P270 581 aa18.39■□□□□ 0.53
CDC42BPB-202ENST00000558321 ACIN1Q9UKV3 1341 aaKnown RBP18.39■□□□□ 0.53
CDC42BPB-202ENST00000558321 CHD2O14647 1828 aaKnown RBP18.39■□□□□ 0.53
CDC42BPB-202ENST00000558321 FAM135BQ49AJ0 1406 aa18.38■□□□□ 0.53
CDC42BPB-202ENST00000558321 ILDR2Q71H61 639 aa18.37■□□□□ 0.53
CDC42BPB-202ENST00000558321 SETD5Q9C0A6 1442 aa18.37■□□□□ 0.53
CDC42BPB-202ENST00000558321 ATF3P18847 181 aa18.36■□□□□ 0.53
CDC42BPB-202ENST00000558321 RPGRIP1LQ68CZ1 1315 aa18.36■□□□□ 0.53
CDC42BPB-202ENST00000558321 C19orf44Q9H6X5 657 aa18.36■□□□□ 0.53
CDC42BPB-202ENST00000558321 KIF1BO60333 1816 aa18.35■□□□□ 0.53
CDC42BPB-202ENST00000558321 NCOA3Q9Y6Q9 1424 aa18.35■□□□□ 0.53
CDC42BPB-202ENST00000558321 PTPRUQ92729 1446 aa18.34■□□□□ 0.53
CDC42BPB-202ENST00000558321 RGL3Q3MIN7 710 aa18.34■□□□□ 0.53
CDC42BPB-202ENST00000558321 CADPS2Q86UW7 1296 aa18.34■□□□□ 0.53
CDC42BPB-202ENST00000558321 SETBP1Q9Y6X0 1596 aa18.34■□□□□ 0.53
CDC42BPB-202ENST00000558321 NEXMIFQ5QGS0 1516 aa18.33■□□□□ 0.53
CDC42BPB-202ENST00000558321 CCDC144AA2RUR9 1427 aa18.33■□□□□ 0.53
CDC42BPB-202ENST00000558321 METP08581 1390 aa18.33■□□□□ 0.53
CDC42BPB-202ENST00000558321 PHF23Q9BUL5 403 aaPredicted RBP18.32■□□□□ 0.52
CDC42BPB-202ENST00000558321 NRXN3Q9Y4C0 1643 aa18.29■□□□□ 0.52
CDC42BPB-202ENST00000558321 MED1Q15648 1581 aaPredicted RBP18.29■□□□□ 0.52
CDC42BPB-202ENST00000558321 RAB3GAP2Q9H2M9 1393 aa18.29■□□□□ 0.52
CDC42BPB-202ENST00000558321 ROBO1Q9Y6N7 1651 aa18.28■□□□□ 0.52
CDC42BPB-202ENST00000558321 ADGRF5Q8IZF2 1346 aa18.24■□□□□ 0.51
CDC42BPB-202ENST00000558321 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.23■□□□□ 0.51
CDC42BPB-202ENST00000558321 ANKRD30BQ9BXX2 1392 aa18.23■□□□□ 0.51
CDC42BPB-202ENST00000558321 SOCS7O14512 581 aa18.23■□□□□ 0.51
CDC42BPB-202ENST00000558321 XRN1Q8IZH2 1706 aaKnown RBP18.22■□□□□ 0.51
CDC42BPB-202ENST00000558321 SPATA31E1Q6ZUB1 1445 aa18.22■□□□□ 0.51
CDC42BPB-202ENST00000558321 BRINP3Q76B58 766 aa18.2■□□□□ 0.5
CDC42BPB-202ENST00000558321 STK26Q9P289 416 aa18.2■□□□□ 0.5
CDC42BPB-202ENST00000558321 DCCP43146 1447 aa18.2■□□□□ 0.5
CDC42BPB-202ENST00000558321 PPLO60437 1756 aa18.19■□□□□ 0.5
CDC42BPB-202ENST00000558321 HRCP23327 699 aa18.18■□□□□ 0.5
CDC42BPB-202ENST00000558321 PHLPP1O60346 1717 aa18.18■□□□□ 0.5
CDC42BPB-202ENST00000558321 ROBO2Q9HCK4 1378 aa18.17■□□□□ 0.5
CDC42BPB-202ENST00000558321 JCADQ9P266 1359 aa18.17■□□□□ 0.5
CDC42BPB-202ENST00000558321 ADGRL3Q9HAR2 1447 aa18.17■□□□□ 0.5
CDC42BPB-202ENST00000558321 TMEM132EQ6IEE7 984 aa18.16■□□□□ 0.5
CDC42BPB-202ENST00000558321 PTCH1Q13635 1447 aa18.15■□□□□ 0.5
CDC42BPB-202ENST00000558321 MST1RQ04912 1400 aa18.15■□□□□ 0.5
CDC42BPB-202ENST00000558321 SETD1AO15047 1707 aaKnown RBP18.12■□□□□ 0.49
CDC42BPB-202ENST00000558321 CFAP70Q5T0N1 1121 aa18.11■□□□□ 0.49
CDC42BPB-202ENST00000558321 MEX3CQ5U5Q3 659 aaKnown RBP18.11■□□□□ 0.49
CDC42BPB-202ENST00000558321 WAPLQ7Z5K2 1190 aa18.11■□□□□ 0.49
CDC42BPB-202ENST00000558321 C14orf93Q9H972 538 aaKnown RBP18.11■□□□□ 0.49
CDC42BPB-202ENST00000558321 KDM2AQ9Y2K7 1162 aa18.11■□□□□ 0.49
CDC42BPB-202ENST00000558321 LRPPRCP42704 1394 aaKnown RBP18.11■□□□□ 0.49
CDC42BPB-202ENST00000558321 PIK3C2GO75747 1445 aa18.1■□□□□ 0.49
CDC42BPB-202ENST00000558321 SPATA31A6Q5VVP1 1343 aa18.1■□□□□ 0.49
CDC42BPB-202ENST00000558321 DDX17Q92841 729 aaKnown RBP18.1■□□□□ 0.49
CDC42BPB-202ENST00000558321 RGS17Q9UGC6 210 aaPredicted RBP18.1■□□□□ 0.49
CDC42BPB-202ENST00000558321 COL16A1Q07092 1604 aaPredicted RBP18.09■□□□□ 0.49
CDC42BPB-202ENST00000558321 AHDC1Q5TGY3 1603 aaPredicted RBP18.09■□□□□ 0.49
CDC42BPB-202ENST00000558321 ASXL1Q8IXJ9 1541 aa18.09■□□□□ 0.49
CDC42BPB-202ENST00000558321 PRAG1Q86YV5 1406 aa18.09■□□□□ 0.49
CDC42BPB-202ENST00000558321 LRRC59Q96AG4 307 aaKnown RBP18.09■□□□□ 0.49
CDC42BPB-202ENST00000558321 NALCNQ8IZF0 1738 aa18.09■□□□□ 0.49
CDC42BPB-202ENST00000558321 C1orf167Q5SNV9 1468 aa18.08■□□□□ 0.49
CDC42BPB-202ENST00000558321 ABCC11Q96J66 1382 aa18.08■□□□□ 0.49
CDC42BPB-202ENST00000558321 NUTM2BA6NNL0 878 aaPredicted RBP18.08■□□□□ 0.48
CDC42BPB-202ENST00000558321 NUTM2EB1AL46 878 aaPredicted RBP18.08■□□□□ 0.48
CDC42BPB-202ENST00000558321 NUTM2AQ8IVF1 878 aaPredicted RBP18.08■□□□□ 0.48
CDC42BPB-202ENST00000558321 DCAF11Q8TEB1 546 aa18.08■□□□□ 0.48
CDC42BPB-202ENST00000558321 ORAI2Q96SN7 254 aa18.08■□□□□ 0.48
CDC42BPB-202ENST00000558321 IFT172Q9UG01 1749 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms