RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 NAT10Q9H0A0 1025 aaKnown RBP14.28□□□□□ -0.12
CSPG4P12-201ENST00000558282 HOOK1Q9UJC3 728 aaKnown RBP14.28□□□□□ -0.12
CSPG4P12-201ENST00000558282 LMOD3Q0VAK6 560 aa14.28□□□□□ -0.12
CSPG4P12-201ENST00000558282 RNF20Q5VTR2 975 aa14.27□□□□□ -0.12
CSPG4P12-201ENST00000558282 BICD2Q8TD16 824 aa14.27□□□□□ -0.13
CSPG4P12-201ENST00000558282 RASSF8Q8NHQ8 419 aa14.26□□□□□ -0.13
CSPG4P12-201ENST00000558282 L3MBTL2Q969R5 705 aa14.26□□□□□ -0.13
CSPG4P12-201ENST00000558282 COG6Q9Y2V7 657 aa14.26□□□□□ -0.13
CSPG4P12-201ENST00000558282 NCAPD3P42695 1498 aa14.25□□□□□ -0.13
CSPG4P12-201ENST00000558282 CREBRFQ8IUR6 639 aa14.25□□□□□ -0.13
CSPG4P12-201ENST00000558282 KIAA0754O94854 1291 aa14.25□□□□□ -0.13
CSPG4P12-201ENST00000558282 INTS3Q68E01 1043 aaKnown RBP14.25□□□□□ -0.13
CSPG4P12-201ENST00000558282 CIZ1Q9ULV3 898 aaPredicted RBP14.25□□□□□ -0.13
CSPG4P12-201ENST00000558282 EIF3JO75822 258 aaKnown RBP14.25□□□□□ -0.13
CSPG4P12-201ENST00000558282 CHMP7Q8WUX9 453 aaPredicted RBP14.25□□□□□ -0.13
CSPG4P12-201ENST00000558282 RUFY2Q8WXA3 655 aa14.25□□□□□ -0.13
CSPG4P12-201ENST00000558282 HSP90AB3PQ58FF7 597 aa14.24□□□□□ -0.13
CSPG4P12-201ENST00000558282 PKD2Q13563 968 aa14.24□□□□□ -0.13
CSPG4P12-201ENST00000558282 RNF214Q8ND24 703 aa14.24□□□□□ -0.13
CSPG4P12-201ENST00000558282 FOXD4L6Q3SYB3 417 aaPredicted RBP14.24□□□□□ -0.13
CSPG4P12-201ENST00000558282 FOXD4L3Q6VB84 417 aaPredicted RBP14.24□□□□□ -0.13
CSPG4P12-201ENST00000558282 CCDC73Q6ZRK6 1079 aa14.24□□□□□ -0.13
CSPG4P12-201ENST00000558282 CLSTN1O94985 981 aa14.23□□□□□ -0.13
CSPG4P12-201ENST00000558282 ZKSCAN1P17029 563 aaPredicted RBP14.23□□□□□ -0.13
CSPG4P12-201ENST00000558282 SMC3Q9UQE7 1217 aa14.23□□□□□ -0.13
CSPG4P12-201ENST00000558282 PES1O00541 588 aaKnown RBP14.23□□□□□ -0.13
CSPG4P12-201ENST00000558282 MCM2P49736 904 aa14.23□□□□□ -0.13
CSPG4P12-201ENST00000558282 HDGFL2Q7Z4V5 671 aaPredicted RBP14.23□□□□□ -0.13
CSPG4P12-201ENST00000558282 TRIM5Q9C035 493 aa14.22□□□□□ -0.13
CSPG4P12-201ENST00000558282 ERLIN1O75477 346 aa14.22□□□□□ -0.13
CSPG4P12-201ENST00000558282 MCM4P33991 863 aa14.22□□□□□ -0.13
CSPG4P12-201ENST00000558282 CCDC146Q8IYE0 955 aa14.21□□□□□ -0.13
CSPG4P12-201ENST00000558282 MSH5O43196 834 aa14.21□□□□□ -0.13
CSPG4P12-201ENST00000558282 KANK4Q5T7N3 995 aaPredicted RBP14.21□□□□□ -0.13
CSPG4P12-201ENST00000558282 CWC22Q9HCG8 908 aaKnown RBP14.21□□□□□ -0.13
CSPG4P12-201ENST00000558282 SPAG9O60271 1321 aaKnown RBP14.21□□□□□ -0.14
CSPG4P12-201ENST00000558282 GOLGA6L7A0A1B0GV03 622 aa14.2□□□□□ -0.14
CSPG4P12-201ENST00000558282 CPLX2Q6PUV4 134 aaKnown RBP14.2□□□□□ -0.14
CSPG4P12-201ENST00000558282 RAPGEF2Q9Y4G8 1499 aa14.2□□□□□ -0.14
CSPG4P12-201ENST00000558282 GIMAP7Q8NHV1 300 aa14.2□□□□□ -0.14
CSPG4P12-201ENST00000558282 TAF7LQ5H9L4 462 aa14.19□□□□□ -0.14
CSPG4P12-201ENST00000558282 DZIP1LQ8IYY4 767 aaKnown RBP14.19□□□□□ -0.14
CSPG4P12-201ENST00000558282 SRPK2P78362 688 aaKnown RBP14.19□□□□□ -0.14
CSPG4P12-201ENST00000558282 RILPL2Q969X0 211 aa14.19□□□□□ -0.14
CSPG4P12-201ENST00000558282 HMGXB3Q12766 1538 aa14.18□□□□□ -0.14
CSPG4P12-201ENST00000558282 CDC45O75419 566 aa14.18□□□□□ -0.14
CSPG4P12-201ENST00000558282 MCM5P33992 734 aa14.18□□□□□ -0.14
CSPG4P12-201ENST00000558282 KIF7Q2M1P5 1343 aa14.18□□□□□ -0.14
CSPG4P12-201ENST00000558282 RABEP1Q15276 862 aa14.18□□□□□ -0.14
CSPG4P12-201ENST00000558282 DNAJC5BQ9UF47 199 aa14.18□□□□□ -0.14
CSPG4P12-201ENST00000558282 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.18□□□□□ -0.14
CSPG4P12-201ENST00000558282 KANK1Q14678 1352 aa14.18□□□□□ -0.14
CSPG4P12-201ENST00000558282 KIF2AO00139 706 aaPredicted RBP14.18□□□□□ -0.14
CSPG4P12-201ENST00000558282 DYNC1I1O14576 645 aa14.18□□□□□ -0.14
CSPG4P12-201ENST00000558282 FAM107BQ9H098 131 aa14.18□□□□□ -0.14
CSPG4P12-201ENST00000558282 ZRSR2Q15696 482 aaKnown RBP14.17□□□□□ -0.14
CSPG4P12-201ENST00000558282 CCDC47Q96A33 483 aaKnown RBP14.17□□□□□ -0.14
CSPG4P12-201ENST00000558282 AXDND1Q5T1B0 1012 aaPredicted RBP14.17□□□□□ -0.14
CSPG4P12-201ENST00000558282 PRPF40AO75400 957 aaKnown RBP14.16□□□□□ -0.14
CSPG4P12-201ENST00000558282 INCENPQ9NQS7 918 aa14.16□□□□□ -0.14
CSPG4P12-201ENST00000558282 CGNQ9P2M7 1197 aaKnown RBP14.16□□□□□ -0.14
CSPG4P12-201ENST00000558282 ROCK1Q13464 1354 aa14.16□□□□□ -0.14
CSPG4P12-201ENST00000558282 VPS37CA5D8V6 355 aaPredicted RBP14.16□□□□□ -0.14
CSPG4P12-201ENST00000558282 BBXQ8WY36 941 aaPredicted RBP14.16□□□□□ -0.14
CSPG4P12-201ENST00000558282 MYO6Q9UM54 1294 aa14.16□□□□□ -0.14
CSPG4P12-201ENST00000558282 CT47B1P0C2W7 299 aaPredicted RBP14.16□□□□□ -0.14
CSPG4P12-201ENST00000558282 DNAJC2Q99543 621 aaKnown RBP14.15□□□□□ -0.14
CSPG4P12-201ENST00000558282 ERCC6Q03468 1493 aa14.15□□□□□ -0.14
CSPG4P12-201ENST00000558282 ANKRD30AQ9BXX3 1397 aa14.15□□□□□ -0.14
CSPG4P12-201ENST00000558282 CCDC192P0DO97 292 aa14.15□□□□□ -0.14
CSPG4P12-201ENST00000558282 CLCN1P35523 988 aa14.15□□□□□ -0.14
CSPG4P12-201ENST00000558282 ERICH4A6NGS2 130 aa14.14□□□□□ -0.15
CSPG4P12-201ENST00000558282 CHMP3Q9Y3E7 222 aa14.14□□□□□ -0.15
CSPG4P12-201ENST00000558282 CNTLNQ9NXG0 1405 aa14.14□□□□□ -0.15
CSPG4P12-201ENST00000558282 CBX1P83916 185 aa14.14□□□□□ -0.15
CSPG4P12-201ENST00000558282 API5Q9BZZ5 524 aaKnown RBP14.14□□□□□ -0.15
CSPG4P12-201ENST00000558282 GORABQ5T7V8 394 aa14.14□□□□□ -0.15
CSPG4P12-201ENST00000558282 OLFM4Q6UX06 510 aa14.14□□□□□ -0.15
CSPG4P12-201ENST00000558282 SLC4A10Q6U841 1118 aa14.13□□□□□ -0.15
CSPG4P12-201ENST00000558282 A0A0G2JS52 829 aa14.13□□□□□ -0.15
CSPG4P12-201ENST00000558282 CAGE1Q8TC20 777 aa14.13□□□□□ -0.15
CSPG4P12-201ENST00000558282 TIGD1Q96MW7 591 aa14.13□□□□□ -0.15
CSPG4P12-201ENST00000558282 KIF21BO75037 1637 aa14.13□□□□□ -0.15
CSPG4P12-201ENST00000558282 PCMTD1Q96MG8 357 aaPredicted RBP14.13□□□□□ -0.15
CSPG4P12-201ENST00000558282 PRDM10Q9NQV6 1147 aa14.13□□□□□ -0.15
CSPG4P12-201ENST00000558282 TRIM29Q14134 588 aa14.13□□□□□ -0.15
CSPG4P12-201ENST00000558282 ANO2Q9NQ90 1003 aa14.13□□□□□ -0.15
CSPG4P12-201ENST00000558282 AEBP1Q8IUX7 1158 aa14.12□□□□□ -0.15
CSPG4P12-201ENST00000558282 PDCP20941 246 aa14.12□□□□□ -0.15
CSPG4P12-201ENST00000558282 LRRFIP1Q32MZ4 808 aaKnown RBP14.12□□□□□ -0.15
CSPG4P12-201ENST00000558282 FOXD1Q16676 465 aa14.12□□□□□ -0.15
CSPG4P12-201ENST00000558282 TMCO3Q6UWJ1 677 aa14.12□□□□□ -0.15
CSPG4P12-201ENST00000558282 BRD4O60885 1362 aaPredicted RBP14.11□□□□□ -0.15
CSPG4P12-201ENST00000558282 GTPBP4Q9BZE4 634 aaKnown RBP14.11□□□□□ -0.15
CSPG4P12-201ENST00000558282 ERICH3Q5RHP9 1530 aa14.11□□□□□ -0.15
CSPG4P12-201ENST00000558282 GBP3Q9H0R5 595 aa14.11□□□□□ -0.15
CSPG4P12-201ENST00000558282 ZHX1Q9UKY1 873 aaPredicted RBP14.11□□□□□ -0.15
CSPG4P12-201ENST00000558282 C11orf95C9JLR9 678 aaPredicted RBP14.1□□□□□ -0.15
CSPG4P12-201ENST00000558282 DYDC1Q8WWB3 177 aa14.1□□□□□ -0.15
CSPG4P12-201ENST00000558282 SMARCE1Q969G3 411 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms