RNA–Protein interactions for RNA: ENST00000558216.1

CHRNB4-203, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 2

Gene CHRNB4, Length 578 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-203ENST00000558216 NAIPQ13075 1403 aa20.03■□□□□ 0.8
CHRNB4-203ENST00000558216 TMEM94Q12767 1356 aa20.03■□□□□ 0.8
CHRNB4-203ENST00000558216 TMEM2Q9UHN6 1383 aa20.02■□□□□ 0.8
CHRNB4-203ENST00000558216 SLC52A1Q9NWF4 448 aa20.01■□□□□ 0.79
CHRNB4-203ENST00000558216 NOS1P29475 1434 aa20.01■□□□□ 0.79
CHRNB4-203ENST00000558216 TET3O43151 1660 aa20■□□□□ 0.79
CHRNB4-203ENST00000558216 EID1Q9Y6B2 187 aa20■□□□□ 0.79
CHRNB4-203ENST00000558216 NWD1Q149M9 1564 aa20■□□□□ 0.79
CHRNB4-203ENST00000558216 PHLPP1O60346 1717 aa19.99■□□□□ 0.79
CHRNB4-203ENST00000558216 IQGAP3Q86VI3 1631 aa19.99■□□□□ 0.79
CHRNB4-203ENST00000558216 STAG3Q9UJ98 1225 aa19.98■□□□□ 0.79
CHRNB4-203ENST00000558216 RBM33Q96EV2 1170 aaKnown RBP19.97■□□□□ 0.79
CHRNB4-203ENST00000558216 GCC2Q8IWJ2 1684 aa19.97■□□□□ 0.79
CHRNB4-203ENST00000558216 IDI1Q13907 227 aa19.96■□□□□ 0.79
CHRNB4-203ENST00000558216 ACIN1Q9UKV3 1341 aaKnown RBP19.96■□□□□ 0.79
CHRNB4-203ENST00000558216 NKTRP30414 1462 aaKnown RBP19.95■□□□□ 0.78
CHRNB4-203ENST00000558216 KCNA6P17658 529 aa19.94■□□□□ 0.78
CHRNB4-203ENST00000558216 MYO5BQ9ULV0 1848 aa19.94■□□□□ 0.78
CHRNB4-203ENST00000558216 ADGRB3O60242 1522 aa19.93■□□□□ 0.78
CHRNB4-203ENST00000558216 SLC26A8Q96RN1 970 aa19.93■□□□□ 0.78
CHRNB4-203ENST00000558216 COL16A1Q07092 1604 aaPredicted RBP19.92■□□□□ 0.78
CHRNB4-203ENST00000558216 PROSER2Q86WR7 435 aaPredicted RBP19.92■□□□□ 0.78
CHRNB4-203ENST00000558216 CHD2O14647 1828 aaKnown RBP19.91■□□□□ 0.78
CHRNB4-203ENST00000558216 TRIM52Q96A61 297 aa19.91■□□□□ 0.78
CHRNB4-203ENST00000558216 E9PCH4 1651 aa19.87■□□□□ 0.77
CHRNB4-203ENST00000558216 MSH6P52701 1360 aa19.87■□□□□ 0.77
CHRNB4-203ENST00000558216 LRP6O75581 1613 aa19.87■□□□□ 0.77
CHRNB4-203ENST00000558216 JCADQ9P266 1359 aa19.86■□□□□ 0.77
CHRNB4-203ENST00000558216 HDGFP51858 240 aaKnown RBP19.86■□□□□ 0.77
CHRNB4-203ENST00000558216 SLC4A1APQ9BWU0 796 aaKnown RBP19.85■□□□□ 0.77
CHRNB4-203ENST00000558216 SLAIN2Q9P270 581 aa19.84■□□□□ 0.77
CHRNB4-203ENST00000558216 SETD5Q9C0A6 1442 aa19.84■□□□□ 0.77
CHRNB4-203ENST00000558216 SHPRHQ149N8 1683 aa19.81■□□□□ 0.76
CHRNB4-203ENST00000558216 CHGAP10645 457 aaKnown RBP19.81■□□□□ 0.76
CHRNB4-203ENST00000558216 ZFYVE9O95405 1425 aa19.81■□□□□ 0.76
CHRNB4-203ENST00000558216 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.8■□□□□ 0.76
CHRNB4-203ENST00000558216 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.79■□□□□ 0.76
CHRNB4-203ENST00000558216 TMEM131LA2VDJ0 1609 aa19.79■□□□□ 0.76
CHRNB4-203ENST00000558216 AHDC1Q5TGY3 1603 aaPredicted RBP19.78■□□□□ 0.76
CHRNB4-203ENST00000558216 BCANQ96GW7 911 aa19.78■□□□□ 0.76
CHRNB4-203ENST00000558216 PPP1R15AO75807 674 aaPredicted RBP19.77■□□□□ 0.76
CHRNB4-203ENST00000558216 PLEKHG1Q9ULL1 1385 aa19.77■□□□□ 0.76
CHRNB4-203ENST00000558216 RIMS2Q9UQ26 1411 aa19.76■□□□□ 0.75
CHRNB4-203ENST00000558216 TRPM2O94759 1503 aa19.76■□□□□ 0.75
CHRNB4-203ENST00000558216 UPF1Q92900 1129 aaKnown RBP eCLIP19.76■□□□□ 0.75
CHRNB4-203ENST00000558216 SPHKAPQ2M3C7 1700 aa19.76■□□□□ 0.75
CHRNB4-203ENST00000558216 MPHOSPH9Q99550 1183 aa19.75■□□□□ 0.75
CHRNB4-203ENST00000558216 HRCP23327 699 aa19.74■□□□□ 0.75
CHRNB4-203ENST00000558216 DIP2AQ14689 1571 aa19.74■□□□□ 0.75
CHRNB4-203ENST00000558216 SPATA31A6Q5VVP1 1343 aa19.74■□□□□ 0.75
CHRNB4-203ENST00000558216 RAB3GAP2Q9H2M9 1393 aa19.73■□□□□ 0.75
CHRNB4-203ENST00000558216 NCOA3Q9Y6Q9 1424 aa19.71■□□□□ 0.75
CHRNB4-203ENST00000558216 MEX3CQ5U5Q3 659 aaKnown RBP19.71■□□□□ 0.75
CHRNB4-203ENST00000558216 ADAMTS13Q76LX8 1427 aa19.7■□□□□ 0.74
CHRNB4-203ENST00000558216 ZNF326Q5BKZ1 582 aaKnown RBP19.7■□□□□ 0.74
CHRNB4-203ENST00000558216 ZNF772Q68DY9 489 aaPredicted RBP19.7■□□□□ 0.74
CHRNB4-203ENST00000558216 C14orf37Q86TY3 774 aa19.68■□□□□ 0.74
CHRNB4-203ENST00000558216 SRCAPQ6ZRS2 3230 aa19.67■□□□□ 0.74
CHRNB4-203ENST00000558216 CLTCL1P53675 1640 aa19.67■□□□□ 0.74
CHRNB4-203ENST00000558216 TBX22Q9Y458 520 aa19.67■□□□□ 0.74
CHRNB4-203ENST00000558216 CCDC144AA2RUR9 1427 aa19.66■□□□□ 0.74
CHRNB4-203ENST00000558216 CDK12Q9NYV4 1490 aaPredicted RBP19.66■□□□□ 0.74
CHRNB4-203ENST00000558216 RPGRIP1LQ68CZ1 1315 aa19.65■□□□□ 0.74
CHRNB4-203ENST00000558216 NHSL1Q5SYE7 1610 aa19.65■□□□□ 0.74
CHRNB4-203ENST00000558216 CADPS2Q86UW7 1296 aa19.64■□□□□ 0.73
CHRNB4-203ENST00000558216 ASXL1Q8IXJ9 1541 aa19.63■□□□□ 0.73
CHRNB4-203ENST00000558216 RXRBP28702 533 aa19.63■□□□□ 0.73
CHRNB4-203ENST00000558216 NUTM2DQ5VT03 806 aaPredicted RBP19.63■□□□□ 0.73
CHRNB4-203ENST00000558216 XRN1Q8IZH2 1706 aaKnown RBP19.62■□□□□ 0.73
CHRNB4-203ENST00000558216 ATF3P18847 181 aa19.62■□□□□ 0.73
CHRNB4-203ENST00000558216 C19orf44Q9H6X5 657 aa19.62■□□□□ 0.73
CHRNB4-203ENST00000558216 PTPRUQ92729 1446 aa19.61■□□□□ 0.73
CHRNB4-203ENST00000558216 PIK3R4Q99570 1358 aa19.61■□□□□ 0.73
CHRNB4-203ENST00000558216 NUTM2BA6NNL0 878 aaPredicted RBP19.61■□□□□ 0.73
CHRNB4-203ENST00000558216 NUTM2EB1AL46 878 aaPredicted RBP19.61■□□□□ 0.73
CHRNB4-203ENST00000558216 VGFO15240 615 aaPredicted RBP19.61■□□□□ 0.73
CHRNB4-203ENST00000558216 BRINP3Q76B58 766 aa19.61■□□□□ 0.73
CHRNB4-203ENST00000558216 NUTM2AQ8IVF1 878 aaPredicted RBP19.61■□□□□ 0.73
CHRNB4-203ENST00000558216 NRXN3Q9Y4C0 1643 aa19.61■□□□□ 0.73
CHRNB4-203ENST00000558216 AFF2P51816 1311 aa19.59■□□□□ 0.73
CHRNB4-203ENST00000558216 KIF1BO60333 1816 aa19.59■□□□□ 0.73
CHRNB4-203ENST00000558216 RGS12O14924 1447 aa19.59■□□□□ 0.73
CHRNB4-203ENST00000558216 DCCP43146 1447 aa19.58■□□□□ 0.72
CHRNB4-203ENST00000558216 NEXMIFQ5QGS0 1516 aa19.57■□□□□ 0.72
CHRNB4-203ENST00000558216 MST1RQ04912 1400 aa19.56■□□□□ 0.72
CHRNB4-203ENST00000558216 AMOTL2Q9Y2J4 779 aa19.55■□□□□ 0.72
CHRNB4-203ENST00000558216 SETBP1Q9Y6X0 1596 aa19.55■□□□□ 0.72
CHRNB4-203ENST00000558216 NALCNQ8IZF0 1738 aa19.54■□□□□ 0.72
CHRNB4-203ENST00000558216 SPATA31E1Q6ZUB1 1445 aa19.54■□□□□ 0.72
CHRNB4-203ENST00000558216 ANKRD30BQ9BXX2 1392 aa19.53■□□□□ 0.72
CHRNB4-203ENST00000558216 RGL3Q3MIN7 710 aa19.51■□□□□ 0.71
CHRNB4-203ENST00000558216 PNPLA6Q8IY17 1366 aa19.5■□□□□ 0.71
CHRNB4-203ENST00000558216 C8orf37Q96NL8 207 aa19.5■□□□□ 0.71
CHRNB4-203ENST00000558216 DDX17Q92841 729 aaKnown RBP19.49■□□□□ 0.71
CHRNB4-203ENST00000558216 EP400Q96L91 3159 aa19.49■□□□□ 0.71
CHRNB4-203ENST00000558216 RBM6P78332 1123 aaKnown RBP19.47■□□□□ 0.71
CHRNB4-203ENST00000558216 TRIM26Q12899 539 aaPredicted RBP19.47■□□□□ 0.71
CHRNB4-203ENST00000558216 QTRT2Q9H974 415 aaKnown RBP19.47■□□□□ 0.71
CHRNB4-203ENST00000558216 LAMC1P11047 1609 aa19.47■□□□□ 0.71
CHRNB4-203ENST00000558216 ADGRL3Q9HAR2 1447 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms