RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 CCER1Q8TC90 406 aaPredicted RBP15.21■□□□□ 0.03
LRRC28-204ENST00000558172 PPLO60437 1756 aa15.21■□□□□ 0.02
LRRC28-204ENST00000558172 RIMS2Q9UQ26 1411 aa15.2■□□□□ 0.02
LRRC28-204ENST00000558172 TXNDC2Q86VQ3 553 aa15.2■□□□□ 0.02
LRRC28-204ENST00000558172 IFT172Q9UG01 1749 aa15.2■□□□□ 0.02
LRRC28-204ENST00000558172 ZFYVE9O95405 1425 aa15.19■□□□□ 0.02
LRRC28-204ENST00000558172 RGL3Q3MIN7 710 aa15.19■□□□□ 0.02
LRRC28-204ENST00000558172 SIN3AQ96ST3 1273 aa15.19■□□□□ 0.02
LRRC28-204ENST00000558172 NEXMIFQ5QGS0 1516 aa15.18■□□□□ 0.02
LRRC28-204ENST00000558172 STAC3Q96MF2 364 aa15.18■□□□□ 0.02
LRRC28-204ENST00000558172 DMRT2Q9Y5R5 561 aa15.18■□□□□ 0.02
LRRC28-204ENST00000558172 SCAF11Q99590 1463 aaKnown RBP15.18■□□□□ 0.02
LRRC28-204ENST00000558172 MED14O60244 1454 aa15.17■□□□□ 0.02
LRRC28-204ENST00000558172 VGFO15240 615 aaPredicted RBP15.17■□□□□ 0.02
LRRC28-204ENST00000558172 LTKP29376 864 aa15.17■□□□□ 0.02
LRRC28-204ENST00000558172 NEUROD1Q13562 356 aa15.17■□□□□ 0.02
LRRC28-204ENST00000558172 NCKAP5LQ9HCH0 1330 aa15.17■□□□□ 0.02
LRRC28-204ENST00000558172 PPP1R15AO75807 674 aaPredicted RBP15.16■□□□□ 0.02
LRRC28-204ENST00000558172 IQGAP1P46940 1657 aa15.14■□□□□ 0.01
LRRC28-204ENST00000558172 PLEKHG1Q9ULL1 1385 aa15.13■□□□□ 0.01
LRRC28-204ENST00000558172 NPHP4O75161 1426 aaPredicted RBP15.13■□□□□ 0.01
LRRC28-204ENST00000558172 NUTM2DQ5VT03 806 aaPredicted RBP15.12■□□□□ 0.01
LRRC28-204ENST00000558172 DCAF11Q8TEB1 546 aa15.12■□□□□ 0.01
LRRC28-204ENST00000558172 BCANQ96GW7 911 aa15.11■□□□□ 0.01
LRRC28-204ENST00000558172 TIMELESSQ9UNS1 1208 aa15.11■□□□□ 0.01
LRRC28-204ENST00000558172 MYOM2P54296 1465 aa15.11■□□□□ 0.01
LRRC28-204ENST00000558172 TONSLQ96HA7 1378 aa15.11■□□□□ 0.01
LRRC28-204ENST00000558172 L3MBTL2Q969R5 705 aa15.09■□□□□ 0.01
LRRC28-204ENST00000558172 SETBP1Q9Y6X0 1596 aa15.09■□□□□ 0.01
LRRC28-204ENST00000558172 DIP2AQ14689 1571 aa15.08■□□□□ 0
LRRC28-204ENST00000558172 KDM2AQ9Y2K7 1162 aa15.08■□□□□ 0
LRRC28-204ENST00000558172 ADGRF5Q8IZF2 1346 aa15.08■□□□□ 0
LRRC28-204ENST00000558172 NRXN1Q9ULB1 1477 aa15.08■□□□□ 0
LRRC28-204ENST00000558172 TBX22Q9Y458 520 aa15.07■□□□□ 0
LRRC28-204ENST00000558172 NRXN3Q9Y4C0 1643 aa15.06■□□□□ 0
LRRC28-204ENST00000558172 LAMC1P11047 1609 aa15.06■□□□□ 0
LRRC28-204ENST00000558172 PIK3C2GO75747 1445 aa15.05■□□□□ -0
LRRC28-204ENST00000558172 ADAMTS13Q76LX8 1427 aa15.05■□□□□ -0
LRRC28-204ENST00000558172 CHD2O14647 1828 aaKnown RBP15.04■□□□□ -0
LRRC28-204ENST00000558172 KIAA1210Q9ULL0 1709 aa15.04■□□□□ -0
LRRC28-204ENST00000558172 ALKQ9UM73 1620 aa15.04■□□□□ -0
LRRC28-204ENST00000558172 SLC26A8Q96RN1 970 aa15.04■□□□□ -0
LRRC28-204ENST00000558172 SETD1AO15047 1707 aaKnown RBP15.03■□□□□ -0
LRRC28-204ENST00000558172 PIK3R4Q99570 1358 aa15.03■□□□□ -0
LRRC28-204ENST00000558172 C14orf93Q9H972 538 aaKnown RBP15.02■□□□□ -0
LRRC28-204ENST00000558172 PRAG1Q86YV5 1406 aa15.01□□□□□ -0.01
LRRC28-204ENST00000558172 SENP3Q9H4L4 574 aaPredicted RBP15.01□□□□□ -0.01
LRRC28-204ENST00000558172 KCNA6P17658 529 aa14.99□□□□□ -0.01
LRRC28-204ENST00000558172 CFAP70Q5T0N1 1121 aa14.99□□□□□ -0.01
LRRC28-204ENST00000558172 TRPM1Q7Z4N2 1603 aa14.97□□□□□ -0.01
LRRC28-204ENST00000558172 METP08581 1390 aa14.97□□□□□ -0.01
LRRC28-204ENST00000558172 STRCP1A6NGW2 1772 aa14.96□□□□□ -0.01
LRRC28-204ENST00000558172 NWD1Q149M9 1564 aa14.96□□□□□ -0.01
LRRC28-204ENST00000558172 ZNF335Q9H4Z2 1342 aaPredicted RBP14.95□□□□□ -0.02
LRRC28-204ENST00000558172 AMOTL2Q9Y2J4 779 aa14.95□□□□□ -0.02
LRRC28-204ENST00000558172 CPS1P31327 1500 aa14.95□□□□□ -0.02
LRRC28-204ENST00000558172 NBPF8Q3BBV2 869 aa14.94□□□□□ -0.02
LRRC28-204ENST00000558172 TMEM132EQ6IEE7 984 aa14.94□□□□□ -0.02
LRRC28-204ENST00000558172 KNDC1Q76NI1 1749 aa14.94□□□□□ -0.02
LRRC28-204ENST00000558172 XRN1Q8IZH2 1706 aaKnown RBP14.94□□□□□ -0.02
LRRC28-204ENST00000558172 PTPRUQ92729 1446 aa14.93□□□□□ -0.02
LRRC28-204ENST00000558172 ASXL1Q8IXJ9 1541 aa14.93□□□□□ -0.02
LRRC28-204ENST00000558172 LRPPRCP42704 1394 aaKnown RBP14.93□□□□□ -0.02
LRRC28-204ENST00000558172 NKTRP30414 1462 aaKnown RBP14.93□□□□□ -0.02
LRRC28-204ENST00000558172 ADGRB1O14514 1584 aa14.93□□□□□ -0.02
LRRC28-204ENST00000558172 YTHDC2Q9H6S0 1430 aaKnown RBP14.92□□□□□ -0.02
LRRC28-204ENST00000558172 LTBP4Q8N2S1 1624 aa14.92□□□□□ -0.02
LRRC28-204ENST00000558172 ABCC11Q96J66 1382 aa14.92□□□□□ -0.02
LRRC28-204ENST00000558172 RALGAPBQ86X10 1494 aa14.91□□□□□ -0.02
LRRC28-204ENST00000558172 NBPF1Q3BBV0 1214 aa14.91□□□□□ -0.02
LRRC28-204ENST00000558172 SIRT1Q96EB6 747 aa14.91□□□□□ -0.02
LRRC28-204ENST00000558172 ROCK2O75116 1388 aaKnown RBP14.9□□□□□ -0.02
LRRC28-204ENST00000558172 TECPR2O15040 1411 aa14.9□□□□□ -0.02
LRRC28-204ENST00000558172 GPRASP1Q5JY77 1395 aa14.89□□□□□ -0.03
LRRC28-204ENST00000558172 PROSER2Q86WR7 435 aaPredicted RBP14.89□□□□□ -0.03
LRRC28-204ENST00000558172 STK26Q9P289 416 aa14.89□□□□□ -0.03
LRRC28-204ENST00000558172 PTCH1Q13635 1447 aa14.89□□□□□ -0.03
LRRC28-204ENST00000558172 DLC1Q96QB1 1528 aa14.88□□□□□ -0.03
LRRC28-204ENST00000558172 XIRP1Q702N8 1843 aaKnown RBP14.88□□□□□ -0.03
LRRC28-204ENST00000558172 NCOA3Q9Y6Q9 1424 aa14.88□□□□□ -0.03
LRRC28-204ENST00000558172 LRRC7Q96NW7 1537 aa14.87□□□□□ -0.03
LRRC28-204ENST00000558172 ZEB1P37275 1124 aaPredicted RBP14.87□□□□□ -0.03
LRRC28-204ENST00000558172 CARD11Q9BXL7 1154 aa14.87□□□□□ -0.03
LRRC28-204ENST00000558172 ARHGEF28Q8N1W1 1705 aaKnown RBP14.86□□□□□ -0.03
LRRC28-204ENST00000558172 FAM135BQ49AJ0 1406 aa14.86□□□□□ -0.03
LRRC28-204ENST00000558172 TRAK1Q9UPV9 953 aa14.86□□□□□ -0.03
LRRC28-204ENST00000558172 IQSEC2Q5JU85 1478 aa14.85□□□□□ -0.03
LRRC28-204ENST00000558172 TMEM94Q12767 1356 aa14.85□□□□□ -0.03
LRRC28-204ENST00000558172 ROBO2Q9HCK4 1378 aa14.85□□□□□ -0.03
LRRC28-204ENST00000558172 POGKQ9P215 609 aa14.84□□□□□ -0.03
LRRC28-204ENST00000558172 CERKQ8TCT0 537 aa14.83□□□□□ -0.04
LRRC28-204ENST00000558172 EIF3AQ14152 1382 aaKnown RBP14.83□□□□□ -0.04
LRRC28-204ENST00000558172 WAPLQ7Z5K2 1190 aa14.82□□□□□ -0.04
LRRC28-204ENST00000558172 PRAM1Q96QH2 718 aa14.82□□□□□ -0.04
LRRC28-204ENST00000558172 C14orf37Q86TY3 774 aa14.81□□□□□ -0.04
LRRC28-204ENST00000558172 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.8□□□□□ -0.04
LRRC28-204ENST00000558172 C19orf44Q9H6X5 657 aa14.8□□□□□ -0.04
LRRC28-204ENST00000558172 MSH6P52701 1360 aa14.8□□□□□ -0.04
LRRC28-204ENST00000558172 NALCNQ8IZF0 1738 aa14.8□□□□□ -0.04
LRRC28-204ENST00000558172 RBM33Q96EV2 1170 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms