RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 FECHP22830 423 aa11.65□□□□□ -0.54
CLPX-202ENST00000558103 NUDT18Q6ZVK8 323 aa11.65□□□□□ -0.54
CLPX-202ENST00000558103 SEPT9Q9UHD8 586 aaPredicted RBP11.65□□□□□ -0.54
CLPX-202ENST00000558103 PNMA3Q9UL41 463 aa11.65□□□□□ -0.54
CLPX-202ENST00000558103 GOLGA8CPA6NN73 597 aa11.64□□□□□ -0.55
CLPX-202ENST00000558103 NBPF26B4DH59 902 aa11.64□□□□□ -0.55
CLPX-202ENST00000558103 SMAPO00193 183 aa11.64□□□□□ -0.55
CLPX-202ENST00000558103 FAM98CQ17RN3 349 aaKnown RBP11.63□□□□□ -0.55
CLPX-202ENST00000558103 PDS5BQ9NTI5 1447 aa11.62□□□□□ -0.55
CLPX-202ENST00000558103 LCE2BO14633 110 aa11.62□□□□□ -0.55
CLPX-202ENST00000558103 WNT2BQ93097 391 aa11.62□□□□□ -0.55
CLPX-202ENST00000558103 ADGRG1Q9Y653 693 aa11.62□□□□□ -0.55
CLPX-202ENST00000558103 ZC3H15Q8WU90 426 aaKnown RBP11.61□□□□□ -0.55
CLPX-202ENST00000558103 EYA1Q99502 592 aa11.61□□□□□ -0.55
CLPX-202ENST00000558103 ZFRQ96KR1 1074 aaKnown RBP11.6□□□□□ -0.55
CLPX-202ENST00000558103 OATP04181 439 aa11.59□□□□□ -0.55
CLPX-202ENST00000558103 FAM161AQ3B820 660 aa11.59□□□□□ -0.55
CLPX-202ENST00000558103 RBM46Q8TBY0 533 aaKnown RBP11.59□□□□□ -0.55
CLPX-202ENST00000558103 WDR62O43379 1518 aa11.59□□□□□ -0.55
CLPX-202ENST00000558103 CADPSQ9ULU8 1353 aa11.58□□□□□ -0.56
CLPX-202ENST00000558103 ZMYND10O75800 440 aa11.57□□□□□ -0.56
CLPX-202ENST00000558103 BARGINQ6ZT62 677 aa11.56□□□□□ -0.56
CLPX-202ENST00000558103 MRC2Q9UBG0 1479 aa11.56□□□□□ -0.56
CLPX-202ENST00000558103 MAP2K5Q13163 448 aa11.55□□□□□ -0.56
CLPX-202ENST00000558103 ANKK1Q8NFD2 765 aa11.55□□□□□ -0.56
CLPX-202ENST00000558103 MINK1Q8N4C8 1332 aaPredicted RBP11.55□□□□□ -0.56
CLPX-202ENST00000558103 IRF6O14896 467 aa11.54□□□□□ -0.56
CLPX-202ENST00000558103 HDGFP51858 240 aaKnown RBP11.54□□□□□ -0.56
CLPX-202ENST00000558103 PXYLP1Q8TE99 480 aa11.54□□□□□ -0.56
CLPX-202ENST00000558103 TRAF7Q6Q0C0 670 aa11.53□□□□□ -0.56
CLPX-202ENST00000558103 METTL3Q86U44 580 aaKnown RBP11.53□□□□□ -0.56
CLPX-202ENST00000558103 SOWAHBA6NEL2 793 aa11.52□□□□□ -0.57
CLPX-202ENST00000558103 KRI1Q8N9T8 703 aaKnown RBP11.52□□□□□ -0.57
CLPX-202ENST00000558103 PRDM2Q13029 1718 aa11.52□□□□□ -0.57
CLPX-202ENST00000558103 RCCD1A6NED2 376 aa11.51□□□□□ -0.57
CLPX-202ENST00000558103 DNAJB2P25686 324 aa11.51□□□□□ -0.57
CLPX-202ENST00000558103 SAMD7Q7Z3H4 446 aa11.51□□□□□ -0.57
CLPX-202ENST00000558103 LRCH3Q96II8 777 aa11.5□□□□□ -0.57
CLPX-202ENST00000558103 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.5□□□□□ -0.57
CLPX-202ENST00000558103 CEP164Q9UPV0 1460 aa11.5□□□□□ -0.57
CLPX-202ENST00000558103 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.49□□□□□ -0.57
CLPX-202ENST00000558103 BCAMP50895 628 aa11.49□□□□□ -0.57
CLPX-202ENST00000558103 TOP2AP11388 1531 aaKnown RBP11.49□□□□□ -0.57
CLPX-202ENST00000558103 ITGBL1O95965 494 aaPredicted RBP11.48□□□□□ -0.57
CLPX-202ENST00000558103 SWT1Q5T5J6 900 aaKnown RBP11.48□□□□□ -0.57
CLPX-202ENST00000558103 TMEM134Q9H6X4 195 aa11.48□□□□□ -0.57
CLPX-202ENST00000558103 CFTRP13569 1480 aa11.47□□□□□ -0.57
CLPX-202ENST00000558103 FANCD2Q9BXW9 1451 aa11.47□□□□□ -0.57
CLPX-202ENST00000558103 PHOX2BQ99453 314 aa11.47□□□□□ -0.57
CLPX-202ENST00000558103 GFRA3O60609 400 aa11.46□□□□□ -0.57
CLPX-202ENST00000558103 CCDC102AQ96A19 550 aa11.46□□□□□ -0.57
CLPX-202ENST00000558103 RSF1Q96T23 1441 aaPredicted RBP11.45□□□□□ -0.58
CLPX-202ENST00000558103 LAPTM4AQ15012 233 aa11.45□□□□□ -0.58
CLPX-202ENST00000558103 TSR3Q9UJK0 312 aaKnown RBP11.44□□□□□ -0.58
CLPX-202ENST00000558103 PPP4CP60510 307 aa11.43□□□□□ -0.58
CLPX-202ENST00000558103 HPS5Q9UPZ3 1129 aa11.43□□□□□ -0.58
CLPX-202ENST00000558103 SLF2Q8IX21 1173 aa11.42□□□□□ -0.58
CLPX-202ENST00000558103 WBP1LQ9NX94 342 aa11.42□□□□□ -0.58
CLPX-202ENST00000558103 DAXXQ9UER7 740 aaPredicted RBP11.42□□□□□ -0.58
CLPX-202ENST00000558103 SLC4A3P48751 1232 aa11.41□□□□□ -0.58
CLPX-202ENST00000558103 NLRP7Q8WX94 980 aa11.41□□□□□ -0.58
CLPX-202ENST00000558103 URB2Q14146 1524 aaKnown RBP11.4□□□□□ -0.58
CLPX-202ENST00000558103 AK7Q96M32 723 aa11.4□□□□□ -0.58
CLPX-202ENST00000558103 RNF40O75150 1001 aa11.38□□□□□ -0.59
CLPX-202ENST00000558103 SLC24A3Q9HC58 644 aa11.38□□□□□ -0.59
CLPX-202ENST00000558103 NYAP1Q6ZVC0 841 aa11.37□□□□□ -0.59
CLPX-202ENST00000558103 NECTIN2Q92692 538 aa11.37□□□□□ -0.59
CLPX-202ENST00000558103 KCNC4Q03721 635 aa11.36□□□□□ -0.59
CLPX-202ENST00000558103 TRIM66O15016 1216 aa11.35□□□□□ -0.59
CLPX-202ENST00000558103 MDM2Q00987 491 aaPredicted RBP11.35□□□□□ -0.59
CLPX-202ENST00000558103 ZNF787Q6DD87 383 aa11.35□□□□□ -0.59
CLPX-202ENST00000558103 RSPH4AQ5TD94 716 aa11.34□□□□□ -0.59
CLPX-202ENST00000558103 SLC10A3P09131 477 aa11.33□□□□□ -0.6
CLPX-202ENST00000558103 CLCN1P35523 988 aa11.33□□□□□ -0.6
CLPX-202ENST00000558103 AMHR2Q16671 573 aa11.33□□□□□ -0.6
CLPX-202ENST00000558103 ZNF775Q96BV0 537 aaPredicted RBP11.33□□□□□ -0.6
CLPX-202ENST00000558103 TMUB1Q9BVT8 246 aa11.33□□□□□ -0.6
CLPX-202ENST00000558103 DDX11L8A8MPP1 907 aa11.32□□□□□ -0.6
CLPX-202ENST00000558103 SULF1Q8IWU6 871 aa11.32□□□□□ -0.6
CLPX-202ENST00000558103 GPCPD1Q9NPB8 672 aa11.32□□□□□ -0.6
CLPX-202ENST00000558103 TPRNQ4KMQ1 711 aa11.31□□□□□ -0.6
CLPX-202ENST00000558103 CCDC88BA6NC98 1476 aa11.31□□□□□ -0.6
CLPX-202ENST00000558103 APLP1P51693 650 aa11.3□□□□□ -0.6
CLPX-202ENST00000558103 REPIN1Q9BWE0 567 aaKnown RBP11.3□□□□□ -0.6
CLPX-202ENST00000558103 RDH13Q8NBN7 331 aa11.28□□□□□ -0.6
CLPX-202ENST00000558103 PRR14Q9BWN1 585 aa11.28□□□□□ -0.6
CLPX-202ENST00000558103 IFT140Q96RY7 1462 aa11.27□□□□□ -0.6
CLPX-202ENST00000558103 TOPBP1Q92547 1522 aa11.27□□□□□ -0.61
CLPX-202ENST00000558103 TTLL12Q14166 644 aaPredicted RBP11.27□□□□□ -0.61
CLPX-202ENST00000558103 KMT5BQ4FZB7 885 aa11.27□□□□□ -0.61
CLPX-202ENST00000558103 EIF4G3O43432 1585 aaKnown RBP11.27□□□□□ -0.61
CLPX-202ENST00000558103 ZNF608Q9ULD9 1512 aaPredicted RBP11.26□□□□□ -0.61
CLPX-202ENST00000558103 NRG2O14511 850 aaPredicted RBP11.26□□□□□ -0.61
CLPX-202ENST00000558103 CFHP08603 1231 aa11.26□□□□□ -0.61
CLPX-202ENST00000558103 PDE4DQ08499 809 aa11.26□□□□□ -0.61
CLPX-202ENST00000558103 FAM217BQ9NTX9 383 aaPredicted RBP11.26□□□□□ -0.61
CLPX-202ENST00000558103 RIMBP3CA6NJZ7 1639 aa11.26□□□□□ -0.61
CLPX-202ENST00000558103 RIMBP3BA6NNM3 1639 aa11.26□□□□□ -0.61
CLPX-202ENST00000558103 RIMBP3Q9UFD9 1639 aa11.26□□□□□ -0.61
CLPX-202ENST00000558103 DNMBPQ6XZF7 1577 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms