RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 KCNA4P22459 653 aa13.35□□□□□ -0.27
SNRPA1-206ENST00000558059 SLC52A1Q9NWF4 448 aa13.35□□□□□ -0.27
SNRPA1-206ENST00000558059 E9PCH4 1651 aa13.34□□□□□ -0.27
SNRPA1-206ENST00000558059 NUP155O75694 1391 aa13.34□□□□□ -0.27
SNRPA1-206ENST00000558059 SLC4A2P04920 1241 aa13.34□□□□□ -0.27
SNRPA1-206ENST00000558059 TXNDC2Q86VQ3 553 aa13.34□□□□□ -0.27
SNRPA1-206ENST00000558059 SCAF11Q99590 1463 aaKnown RBP13.34□□□□□ -0.27
SNRPA1-206ENST00000558059 TMEM2Q9UHN6 1383 aa13.33□□□□□ -0.27
SNRPA1-206ENST00000558059 POTEHQ6S545 545 aa13.33□□□□□ -0.28
SNRPA1-206ENST00000558059 STAG3Q9UJ98 1225 aa13.33□□□□□ -0.28
SNRPA1-206ENST00000558059 NAIPQ13075 1403 aa13.32□□□□□ -0.28
SNRPA1-206ENST00000558059 MYO5BQ9ULV0 1848 aa13.32□□□□□ -0.28
SNRPA1-206ENST00000558059 ADGRB3O60242 1522 aa13.31□□□□□ -0.28
SNRPA1-206ENST00000558059 EID1Q9Y6B2 187 aa13.31□□□□□ -0.28
SNRPA1-206ENST00000558059 STRCP1A6NGW2 1772 aa13.3□□□□□ -0.28
SNRPA1-206ENST00000558059 CPS1P31327 1500 aa13.29□□□□□ -0.28
SNRPA1-206ENST00000558059 TMEM131LA2VDJ0 1609 aa13.28□□□□□ -0.28
SNRPA1-206ENST00000558059 HFM1A2PYH4 1435 aa13.27□□□□□ -0.29
SNRPA1-206ENST00000558059 UBAP1LF5GYI3 381 aa13.26□□□□□ -0.29
SNRPA1-206ENST00000558059 ZFYVE9O95405 1425 aa13.25□□□□□ -0.29
SNRPA1-206ENST00000558059 RIMS2Q9UQ26 1411 aa13.24□□□□□ -0.29
SNRPA1-206ENST00000558059 SPHKAPQ2M3C7 1700 aa13.24□□□□□ -0.29
SNRPA1-206ENST00000558059 LRRC7Q96NW7 1537 aa13.23□□□□□ -0.29
SNRPA1-206ENST00000558059 CHGAP10645 457 aaKnown RBP13.23□□□□□ -0.29
SNRPA1-206ENST00000558059 SLC26A8Q96RN1 970 aa13.22□□□□□ -0.29
SNRPA1-206ENST00000558059 HDGFP51858 240 aaKnown RBP13.21□□□□□ -0.29
SNRPA1-206ENST00000558059 TRIM52Q96A61 297 aa13.21□□□□□ -0.29
SNRPA1-206ENST00000558059 PLEKHG1Q9ULL1 1385 aa13.2□□□□□ -0.3
SNRPA1-206ENST00000558059 XIRP1Q702N8 1843 aaKnown RBP13.2□□□□□ -0.3
SNRPA1-206ENST00000558059 TOM1O60784 492 aa13.19□□□□□ -0.3
SNRPA1-206ENST00000558059 PPP1R15AO75807 674 aaPredicted RBP13.19□□□□□ -0.3
SNRPA1-206ENST00000558059 KCNA6P17658 529 aa13.19□□□□□ -0.3
SNRPA1-206ENST00000558059 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.19□□□□□ -0.3
SNRPA1-206ENST00000558059 ALKQ9UM73 1620 aa13.19□□□□□ -0.3
SNRPA1-206ENST00000558059 NUTM2DQ5VT03 806 aaPredicted RBP13.18□□□□□ -0.3
SNRPA1-206ENST00000558059 BCANQ96GW7 911 aa13.18□□□□□ -0.3
SNRPA1-206ENST00000558059 SLC4A1APQ9BWU0 796 aaKnown RBP13.18□□□□□ -0.3
SNRPA1-206ENST00000558059 TRPM2O94759 1503 aa13.18□□□□□ -0.3
SNRPA1-206ENST00000558059 CLTCL1P53675 1640 aa13.17□□□□□ -0.3
SNRPA1-206ENST00000558059 ZNF219Q9P2Y4 722 aaPredicted RBP13.17□□□□□ -0.3
SNRPA1-206ENST00000558059 CHD2O14647 1828 aaKnown RBP13.17□□□□□ -0.3
SNRPA1-206ENST00000558059 PIP4K2BP78356 416 aa13.16□□□□□ -0.3
SNRPA1-206ENST00000558059 TBX22Q9Y458 520 aa13.16□□□□□ -0.3
SNRPA1-206ENST00000558059 KIF1BO60333 1816 aa13.16□□□□□ -0.3
SNRPA1-206ENST00000558059 ADAMTS13Q76LX8 1427 aa13.15□□□□□ -0.3
SNRPA1-206ENST00000558059 NWD1Q149M9 1564 aa13.15□□□□□ -0.3
SNRPA1-206ENST00000558059 PROSER2Q86WR7 435 aaPredicted RBP13.14□□□□□ -0.31
SNRPA1-206ENST00000558059 TMEM94Q12767 1356 aa13.14□□□□□ -0.31
SNRPA1-206ENST00000558059 ABCB7O75027 752 aa13.13□□□□□ -0.31
SNRPA1-206ENST00000558059 ZNF326Q5BKZ1 582 aaKnown RBP13.13□□□□□ -0.31
SNRPA1-206ENST00000558059 RBM33Q96EV2 1170 aaKnown RBP13.13□□□□□ -0.31
SNRPA1-206ENST00000558059 SETD5Q9C0A6 1442 aa13.13□□□□□ -0.31
SNRPA1-206ENST00000558059 NKTRP30414 1462 aaKnown RBP13.12□□□□□ -0.31
SNRPA1-206ENST00000558059 HSPA1LP34931 641 aa13.12□□□□□ -0.31
SNRPA1-206ENST00000558059 MPHOSPH9Q99550 1183 aa13.12□□□□□ -0.31
SNRPA1-206ENST00000558059 DIP2AQ14689 1571 aa13.11□□□□□ -0.31
SNRPA1-206ENST00000558059 NEXMIFQ5QGS0 1516 aa13.11□□□□□ -0.31
SNRPA1-206ENST00000558059 NRXN3Q9Y4C0 1643 aa13.1□□□□□ -0.31
SNRPA1-206ENST00000558059 PIK3R4Q99570 1358 aa13.1□□□□□ -0.31
SNRPA1-206ENST00000558059 SETBP1Q9Y6X0 1596 aa13.1□□□□□ -0.31
SNRPA1-206ENST00000558059 ACIN1Q9UKV3 1341 aaKnown RBP13.09□□□□□ -0.31
SNRPA1-206ENST00000558059 PTPRUQ92729 1446 aa13.08□□□□□ -0.32
SNRPA1-206ENST00000558059 RAB3GAP2Q9H2M9 1393 aa13.07□□□□□ -0.32
SNRPA1-206ENST00000558059 AMOTL2Q9Y2J4 779 aa13.07□□□□□ -0.32
SNRPA1-206ENST00000558059 RPGRIP1LQ68CZ1 1315 aa13.06□□□□□ -0.32
SNRPA1-206ENST00000558059 METP08581 1390 aa13.06□□□□□ -0.32
SNRPA1-206ENST00000558059 PPLO60437 1756 aa13.05□□□□□ -0.32
SNRPA1-206ENST00000558059 VGFO15240 615 aaPredicted RBP13.05□□□□□ -0.32
SNRPA1-206ENST00000558059 MSH6P52701 1360 aa13.05□□□□□ -0.32
SNRPA1-206ENST00000558059 FAM135BQ49AJ0 1406 aa13.05□□□□□ -0.32
SNRPA1-206ENST00000558059 NCOA3Q9Y6Q9 1424 aa13.05□□□□□ -0.32
SNRPA1-206ENST00000558059 XRN1Q8IZH2 1706 aaKnown RBP13.04□□□□□ -0.32
SNRPA1-206ENST00000558059 DISP3Q9P2K9 1392 aa13.04□□□□□ -0.32
SNRPA1-206ENST00000558059 CCDC144AA2RUR9 1427 aa13.04□□□□□ -0.32
SNRPA1-206ENST00000558059 SPATA31E1Q6ZUB1 1445 aa13.04□□□□□ -0.32
SNRPA1-206ENST00000558059 SAMD1Q6SPF0 538 aaPredicted RBP13.03□□□□□ -0.32
SNRPA1-206ENST00000558059 SETD1AO15047 1707 aaKnown RBP13.02□□□□□ -0.32
SNRPA1-206ENST00000558059 SLAIN2Q9P270 581 aa13.02□□□□□ -0.33
SNRPA1-206ENST00000558059 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.02□□□□□ -0.33
SNRPA1-206ENST00000558059 HRCP23327 699 aa13.01□□□□□ -0.33
SNRPA1-206ENST00000558059 RGL3Q3MIN7 710 aa13.01□□□□□ -0.33
SNRPA1-206ENST00000558059 C19orf44Q9H6X5 657 aa13.01□□□□□ -0.33
SNRPA1-206ENST00000558059 ROBO1Q9Y6N7 1651 aa13.01□□□□□ -0.33
SNRPA1-206ENST00000558059 C14orf37Q86TY3 774 aa13□□□□□ -0.33
SNRPA1-206ENST00000558059 IFT172Q9UG01 1749 aa12.99□□□□□ -0.33
SNRPA1-206ENST00000558059 ADGRF5Q8IZF2 1346 aa12.99□□□□□ -0.33
SNRPA1-206ENST00000558059 CADPS2Q86UW7 1296 aa12.98□□□□□ -0.33
SNRPA1-206ENST00000558059 ANKRD30BQ9BXX2 1392 aa12.97□□□□□ -0.33
SNRPA1-206ENST00000558059 ATF3P18847 181 aa12.97□□□□□ -0.33
SNRPA1-206ENST00000558059 ILDR2Q71H61 639 aa12.97□□□□□ -0.33
SNRPA1-206ENST00000558059 MED1Q15648 1581 aaPredicted RBP12.96□□□□□ -0.33
SNRPA1-206ENST00000558059 DCCP43146 1447 aa12.95□□□□□ -0.34
SNRPA1-206ENST00000558059 PRAG1Q86YV5 1406 aa12.95□□□□□ -0.34
SNRPA1-206ENST00000558059 ROBO2Q9HCK4 1378 aa12.94□□□□□ -0.34
SNRPA1-206ENST00000558059 PTCH1Q13635 1447 aa12.94□□□□□ -0.34
SNRPA1-206ENST00000558059 ADGRL3Q9HAR2 1447 aa12.94□□□□□ -0.34
SNRPA1-206ENST00000558059 PIK3C2GO75747 1445 aa12.93□□□□□ -0.34
SNRPA1-206ENST00000558059 PHLPP1O60346 1717 aa12.93□□□□□ -0.34
SNRPA1-206ENST00000558059 NALCNQ8IZF0 1738 aa12.93□□□□□ -0.34
SNRPA1-206ENST00000558059 MST1RQ04912 1400 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms