RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 UNC13BO14795 1591 aa20.72■□□□□ 0.91
SNRPA1-204ENST00000558020 GCC2Q8IWJ2 1684 aa20.71■□□□□ 0.91
SNRPA1-204ENST00000558020 ALKQ9UM73 1620 aa20.7■□□□□ 0.9
SNRPA1-204ENST00000558020 SENP3Q9H4L4 574 aaPredicted RBP20.69■□□□□ 0.9
SNRPA1-204ENST00000558020 TMEM94Q12767 1356 aa20.69■□□□□ 0.9
SNRPA1-204ENST00000558020 PLEKHG1Q9ULL1 1385 aa20.68■□□□□ 0.9
SNRPA1-204ENST00000558020 RIMS2Q9UQ26 1411 aa20.68■□□□□ 0.9
SNRPA1-204ENST00000558020 PHF23Q9BUL5 403 aaPredicted RBP20.67■□□□□ 0.9
SNRPA1-204ENST00000558020 TBX22Q9Y458 520 aa20.66■□□□□ 0.9
SNRPA1-204ENST00000558020 IQGAP3Q86VI3 1631 aa20.65■□□□□ 0.9
SNRPA1-204ENST00000558020 ZFYVE9O95405 1425 aa20.65■□□□□ 0.9
SNRPA1-204ENST00000558020 TMEM131LA2VDJ0 1609 aa20.64■□□□□ 0.9
SNRPA1-204ENST00000558020 E9PCH4 1651 aa20.64■□□□□ 0.89
SNRPA1-204ENST00000558020 MED1Q15648 1581 aaPredicted RBP20.63■□□□□ 0.89
SNRPA1-204ENST00000558020 NKTRP30414 1462 aaKnown RBP20.63■□□□□ 0.89
SNRPA1-204ENST00000558020 FAM135BQ49AJ0 1406 aa20.63■□□□□ 0.89
SNRPA1-204ENST00000558020 XIRP1Q702N8 1843 aaKnown RBP20.62■□□□□ 0.89
SNRPA1-204ENST00000558020 MSH6P52701 1360 aa20.62■□□□□ 0.89
SNRPA1-204ENST00000558020 RBM33Q96EV2 1170 aaKnown RBP20.61■□□□□ 0.89
SNRPA1-204ENST00000558020 MYO5BQ9ULV0 1848 aa20.6■□□□□ 0.89
SNRPA1-204ENST00000558020 NUTM2DQ5VT03 806 aaPredicted RBP20.58■□□□□ 0.89
SNRPA1-204ENST00000558020 C14orf37Q86TY3 774 aa20.58■□□□□ 0.89
SNRPA1-204ENST00000558020 SLAIN2Q9P270 581 aa20.58■□□□□ 0.89
SNRPA1-204ENST00000558020 NWD1Q149M9 1564 aa20.57■□□□□ 0.88
SNRPA1-204ENST00000558020 PIK3R4Q99570 1358 aa20.56■□□□□ 0.88
SNRPA1-204ENST00000558020 RRBP1Q9P2E9 1410 aaKnown RBP20.55■□□□□ 0.88
SNRPA1-204ENST00000558020 NCOA3Q9Y6Q9 1424 aa20.55■□□□□ 0.88
SNRPA1-204ENST00000558020 ZNF326Q5BKZ1 582 aaKnown RBP20.55■□□□□ 0.88
SNRPA1-204ENST00000558020 CHD2O14647 1828 aaKnown RBP20.55■□□□□ 0.88
SNRPA1-204ENST00000558020 DIP2AQ14689 1571 aa20.52■□□□□ 0.88
SNRPA1-204ENST00000558020 C19orf44Q9H6X5 657 aa20.52■□□□□ 0.88
SNRPA1-204ENST00000558020 ATF3P18847 181 aa20.51■□□□□ 0.87
SNRPA1-204ENST00000558020 CADPS2Q86UW7 1296 aa20.51■□□□□ 0.87
SNRPA1-204ENST00000558020 ADAMTS13Q76LX8 1427 aa20.51■□□□□ 0.87
SNRPA1-204ENST00000558020 TRIM52Q96A61 297 aa20.5■□□□□ 0.87
SNRPA1-204ENST00000558020 AMOTL2Q9Y2J4 779 aa20.5■□□□□ 0.87
SNRPA1-204ENST00000558020 ROBO1Q9Y6N7 1651 aa20.49■□□□□ 0.87
SNRPA1-204ENST00000558020 NAIPQ13075 1403 aa20.49■□□□□ 0.87
SNRPA1-204ENST00000558020 SPHKAPQ2M3C7 1700 aa20.48■□□□□ 0.87
SNRPA1-204ENST00000558020 TRPM2O94759 1503 aa20.48■□□□□ 0.87
SNRPA1-204ENST00000558020 SLC4A1APQ9BWU0 796 aaKnown RBP20.43■□□□□ 0.86
SNRPA1-204ENST00000558020 HFM1A2PYH4 1435 aa20.43■□□□□ 0.86
SNRPA1-204ENST00000558020 VGFO15240 615 aaPredicted RBP20.42■□□□□ 0.86
SNRPA1-204ENST00000558020 JCADQ9P266 1359 aa20.4■□□□□ 0.86
SNRPA1-204ENST00000558020 SETBP1Q9Y6X0 1596 aa20.4■□□□□ 0.86
SNRPA1-204ENST00000558020 PHLPP1O60346 1717 aa20.39■□□□□ 0.85
SNRPA1-204ENST00000558020 RPGRIP1LQ68CZ1 1315 aa20.38■□□□□ 0.85
SNRPA1-204ENST00000558020 RGS17Q9UGC6 210 aaPredicted RBP20.38■□□□□ 0.85
SNRPA1-204ENST00000558020 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.38■□□□□ 0.85
SNRPA1-204ENST00000558020 PTPRUQ92729 1446 aa20.37■□□□□ 0.85
SNRPA1-204ENST00000558020 KIF1BO60333 1816 aa20.37■□□□□ 0.85
SNRPA1-204ENST00000558020 CLTCL1P53675 1640 aa20.36■□□□□ 0.85
SNRPA1-204ENST00000558020 METP08581 1390 aa20.35■□□□□ 0.85
SNRPA1-204ENST00000558020 DCCP43146 1447 aa20.35■□□□□ 0.85
SNRPA1-204ENST00000558020 SPATA31A6Q5VVP1 1343 aa20.33■□□□□ 0.85
SNRPA1-204ENST00000558020 ACIN1Q9UKV3 1341 aaKnown RBP20.33■□□□□ 0.85
SNRPA1-204ENST00000558020 NRXN3Q9Y4C0 1643 aa20.33■□□□□ 0.84
SNRPA1-204ENST00000558020 NEXMIFQ5QGS0 1516 aa20.32■□□□□ 0.84
SNRPA1-204ENST00000558020 BRINP3Q76B58 766 aa20.31■□□□□ 0.84
SNRPA1-204ENST00000558020 XRN1Q8IZH2 1706 aaKnown RBP20.3■□□□□ 0.84
SNRPA1-204ENST00000558020 MEX3CQ5U5Q3 659 aaKnown RBP20.3■□□□□ 0.84
SNRPA1-204ENST00000558020 POTEAQ6S8J7 498 aa20.29■□□□□ 0.84
SNRPA1-204ENST00000558020 COL16A1Q07092 1604 aaPredicted RBP20.28■□□□□ 0.84
SNRPA1-204ENST00000558020 AHDC1Q5TGY3 1603 aaPredicted RBP20.27■□□□□ 0.84
SNRPA1-204ENST00000558020 LRRC59Q96AG4 307 aaKnown RBP20.26■□□□□ 0.83
SNRPA1-204ENST00000558020 MPHOSPH9Q99550 1183 aa20.26■□□□□ 0.83
SNRPA1-204ENST00000558020 ADGRL3Q9HAR2 1447 aa20.26■□□□□ 0.83
SNRPA1-204ENST00000558020 FOXD1Q16676 465 aa20.25■□□□□ 0.83
SNRPA1-204ENST00000558020 ZNF772Q68DY9 489 aaPredicted RBP20.25■□□□□ 0.83
SNRPA1-204ENST00000558020 CCDC144AA2RUR9 1427 aa20.24■□□□□ 0.83
SNRPA1-204ENST00000558020 MST1RQ04912 1400 aa20.24■□□□□ 0.83
SNRPA1-204ENST00000558020 RGL3Q3MIN7 710 aa20.22■□□□□ 0.83
SNRPA1-204ENST00000558020 ASXL1Q8IXJ9 1541 aa20.22■□□□□ 0.83
SNRPA1-204ENST00000558020 NUTM2BA6NNL0 878 aaPredicted RBP20.21■□□□□ 0.83
SNRPA1-204ENST00000558020 NUTM2EB1AL46 878 aaPredicted RBP20.21■□□□□ 0.83
SNRPA1-204ENST00000558020 NUTM2AQ8IVF1 878 aaPredicted RBP20.21■□□□□ 0.83
SNRPA1-204ENST00000558020 PTCH1Q13635 1447 aa20.2■□□□□ 0.82
SNRPA1-204ENST00000558020 ANKRD30BQ9BXX2 1392 aa20.2■□□□□ 0.82
SNRPA1-204ENST00000558020 SHPRHQ149N8 1683 aa20.19■□□□□ 0.82
SNRPA1-204ENST00000558020 SETD5Q9C0A6 1442 aa20.19■□□□□ 0.82
SNRPA1-204ENST00000558020 ROBO2Q9HCK4 1378 aa20.19■□□□□ 0.82
SNRPA1-204ENST00000558020 PPLO60437 1756 aa20.18■□□□□ 0.82
SNRPA1-204ENST00000558020 PRAG1Q86YV5 1406 aa20.16■□□□□ 0.82
SNRPA1-204ENST00000558020 LRP6O75581 1613 aa20.16■□□□□ 0.82
SNRPA1-204ENST00000558020 ADGRF5Q8IZF2 1346 aa20.15■□□□□ 0.82
SNRPA1-204ENST00000558020 C1orf167Q5SNV9 1468 aa20.15■□□□□ 0.82
SNRPA1-204ENST00000558020 NALCNQ8IZF0 1738 aa20.15■□□□□ 0.82
SNRPA1-204ENST00000558020 SETD1AO15047 1707 aaKnown RBP20.13■□□□□ 0.81
SNRPA1-204ENST00000558020 NHSL1Q5SYE7 1610 aa20.13■□□□□ 0.81
SNRPA1-204ENST00000558020 SPATA31E1Q6ZUB1 1445 aa20.13■□□□□ 0.81
SNRPA1-204ENST00000558020 DDX17Q92841 729 aaKnown RBP20.13■□□□□ 0.81
SNRPA1-204ENST00000558020 STK26Q9P289 416 aa20.13■□□□□ 0.81
SNRPA1-204ENST00000558020 RXRBP28702 533 aa20.12■□□□□ 0.81
SNRPA1-204ENST00000558020 ORAI2Q96SN7 254 aa20.12■□□□□ 0.81
SNRPA1-204ENST00000558020 ESCO1Q5FWF5 840 aa20.09■□□□□ 0.81
SNRPA1-204ENST00000558020 PNPLA6Q8IY17 1366 aa20.08■□□□□ 0.81
SNRPA1-204ENST00000558020 ABCC11Q96J66 1382 aa20.08■□□□□ 0.81
SNRPA1-204ENST00000558020 AFF2P51816 1311 aa20.08■□□□□ 0.81
SNRPA1-204ENST00000558020 SOS2Q07890 1332 aaPredicted RBP20.08■□□□□ 0.81
SNRPA1-204ENST00000558020 TMEM132EQ6IEE7 984 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms