RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 LRPPRCP42704 1394 aaKnown RBP17.77■□□□□ 0.44
CPNE6-204ENST00000557829 MLECQ14165 292 aa17.77■□□□□ 0.44
CPNE6-204ENST00000557829 CLTCL1P53675 1640 aa17.77■□□□□ 0.44
CPNE6-204ENST00000557829 RALBP1Q15311 655 aa17.77■□□□□ 0.43
CPNE6-204ENST00000557829 CARD11Q9BXL7 1154 aa17.76■□□□□ 0.43
CPNE6-204ENST00000557829 CAMSAP1Q5T5Y3 1602 aa17.76■□□□□ 0.43
CPNE6-204ENST00000557829 RGL3Q3MIN7 710 aa17.76■□□□□ 0.43
CPNE6-204ENST00000557829 ADAMTSL3P82987 1691 aa17.76■□□□□ 0.43
CPNE6-204ENST00000557829 MADDQ8WXG6 1647 aa17.75■□□□□ 0.43
CPNE6-204ENST00000557829 UGGT1Q9NYU2 1555 aa17.75■□□□□ 0.43
CPNE6-204ENST00000557829 TMC1Q8TDI8 760 aa17.74■□□□□ 0.43
CPNE6-204ENST00000557829 CFAP65Q6ZU64 1925 aaKnown RBP17.74■□□□□ 0.43
CPNE6-204ENST00000557829 TRPM1Q7Z4N2 1603 aa17.74■□□□□ 0.43
CPNE6-204ENST00000557829 MYBBP1AQ9BQG0 1328 aaKnown RBP17.73■□□□□ 0.43
CPNE6-204ENST00000557829 ZC3H13Q5T200 1668 aaKnown RBP17.72■□□□□ 0.43
CPNE6-204ENST00000557829 ARHGAP31Q2M1Z3 1444 aa17.72■□□□□ 0.43
CPNE6-204ENST00000557829 LAMC1P11047 1609 aa17.72■□□□□ 0.43
CPNE6-204ENST00000557829 DCAF11Q8TEB1 546 aa17.72■□□□□ 0.43
CPNE6-204ENST00000557829 KDM2AQ9Y2K7 1162 aa17.72■□□□□ 0.43
CPNE6-204ENST00000557829 POLR3GLQ9BT43 218 aa17.7■□□□□ 0.42
CPNE6-204ENST00000557829 PPP6R1Q9UPN7 881 aa17.7■□□□□ 0.42
CPNE6-204ENST00000557829 NOS1P29475 1434 aa17.7■□□□□ 0.42
CPNE6-204ENST00000557829 KIF1BO60333 1816 aa17.7■□□□□ 0.42
CPNE6-204ENST00000557829 RIMS1Q86UR5 1692 aaKnown RBP17.69■□□□□ 0.42
CPNE6-204ENST00000557829 FER1L4A9Z1Z3 1794 aa17.69■□□□□ 0.42
CPNE6-204ENST00000557829 ST20-MTHFSA0A0A6YYL1 179 aa17.69■□□□□ 0.42
CPNE6-204ENST00000557829 CCDC136Q96JN2 1154 aa17.69■□□□□ 0.42
CPNE6-204ENST00000557829 INSRP06213 1382 aa17.68■□□□□ 0.42
CPNE6-204ENST00000557829 PRAG1Q86YV5 1406 aa17.68■□□□□ 0.42
CPNE6-204ENST00000557829 MROH2AA6NES4 1674 aa17.67■□□□□ 0.42
CPNE6-204ENST00000557829 FBXO31Q5XUX0 539 aaPredicted RBP17.67■□□□□ 0.42
CPNE6-204ENST00000557829 SYNMO15061 1565 aa17.66■□□□□ 0.42
CPNE6-204ENST00000557829 CLTCQ00610 1675 aaKnown RBP17.66■□□□□ 0.42
CPNE6-204ENST00000557829 PDE3BQ13370 1112 aa17.66■□□□□ 0.42
CPNE6-204ENST00000557829 GPRASP1Q5JY77 1395 aa17.66■□□□□ 0.42
CPNE6-204ENST00000557829 PTPRMP28827 1452 aa17.65■□□□□ 0.42
CPNE6-204ENST00000557829 PARD3Q8TEW0 1356 aa17.64■□□□□ 0.42
CPNE6-204ENST00000557829 PLPPR3Q6T4P5 718 aa17.63■□□□□ 0.41
CPNE6-204ENST00000557829 NLRP13Q86W25 1043 aa17.63■□□□□ 0.41
CPNE6-204ENST00000557829 IFT172Q9UG01 1749 aa17.63■□□□□ 0.41
CPNE6-204ENST00000557829 ERVK-7P63135 1459 aa17.62■□□□□ 0.41
CPNE6-204ENST00000557829 NOP58Q9Y2X3 529 aaKnown RBP17.62■□□□□ 0.41
CPNE6-204ENST00000557829 CHGAP10645 457 aaKnown RBP17.62■□□□□ 0.41
CPNE6-204ENST00000557829 PREX1Q8TCU6 1659 aa17.61■□□□□ 0.41
CPNE6-204ENST00000557829 IDI1Q13907 227 aa17.61■□□□□ 0.41
CPNE6-204ENST00000557829 AEBP2Q6ZN18 517 aaPredicted RBP17.61■□□□□ 0.41
CPNE6-204ENST00000557829 ESF1Q9H501 851 aaKnown RBP17.61■□□□□ 0.41
CPNE6-204ENST00000557829 ZMYM3Q14202 1370 aa17.61■□□□□ 0.41
CPNE6-204ENST00000557829 NEURL4Q96JN8 1562 aa17.61■□□□□ 0.41
CPNE6-204ENST00000557829 ADGRB3O60242 1522 aa17.6■□□□□ 0.41
CPNE6-204ENST00000557829 PIK3C2BO00750 1634 aa17.6■□□□□ 0.41
CPNE6-204ENST00000557829 CEBPAP49715 358 aaPredicted RBP17.6■□□□□ 0.41
CPNE6-204ENST00000557829 RRP1P56182 461 aaKnown RBP17.58■□□□□ 0.4
CPNE6-204ENST00000557829 PER1O15534 1290 aaPredicted RBP17.57■□□□□ 0.4
CPNE6-204ENST00000557829 CNGB1Q14028 1251 aaPredicted RBP17.57■□□□□ 0.4
CPNE6-204ENST00000557829 SLC52A1Q9NWF4 448 aa17.57■□□□□ 0.4
CPNE6-204ENST00000557829 C3P01024 1663 aa17.56■□□□□ 0.4
CPNE6-204ENST00000557829 ANP32AP39687 249 aaKnown RBP17.56■□□□□ 0.4
CPNE6-204ENST00000557829 SPATA31D1Q6ZQQ2 1576 aa17.56■□□□□ 0.4
CPNE6-204ENST00000557829 NBPF1Q3BBV0 1214 aa17.56■□□□□ 0.4
CPNE6-204ENST00000557829 IPO9Q96P70 1041 aaKnown RBP17.55■□□□□ 0.4
CPNE6-204ENST00000557829 RCAN3Q9UKA8 241 aa17.55■□□□□ 0.4
CPNE6-204ENST00000557829 PPLO60437 1756 aa17.54■□□□□ 0.4
CPNE6-204ENST00000557829 ADGRF5Q8IZF2 1346 aa17.54■□□□□ 0.4
CPNE6-204ENST00000557829 IQGAP1P46940 1657 aa17.54■□□□□ 0.4
CPNE6-204ENST00000557829 BLMP54132 1417 aaPredicted RBP17.53■□□□□ 0.4
CPNE6-204ENST00000557829 TCERG1O14776 1098 aaKnown RBP17.53■□□□□ 0.4
CPNE6-204ENST00000557829 KIAA1210Q9ULL0 1709 aa17.53■□□□□ 0.4
CPNE6-204ENST00000557829 MYOM2P54296 1465 aa17.52■□□□□ 0.39
CPNE6-204ENST00000557829 MYO5BQ9ULV0 1848 aa17.52■□□□□ 0.39
CPNE6-204ENST00000557829 STAC3Q96MF2 364 aa17.52■□□□□ 0.39
CPNE6-204ENST00000557829 NUTM2DQ5VT03 806 aaPredicted RBP17.5■□□□□ 0.39
CPNE6-204ENST00000557829 TESK2Q96S53 571 aa17.5■□□□□ 0.39
CPNE6-204ENST00000557829 TMEM131LA2VDJ0 1609 aa17.5■□□□□ 0.39
CPNE6-204ENST00000557829 MS4A1P11836 297 aa17.49■□□□□ 0.39
CPNE6-204ENST00000557829 RPGRIP1LQ68CZ1 1315 aa17.49■□□□□ 0.39
CPNE6-204ENST00000557829 TNRQ92752 1358 aa17.49■□□□□ 0.39
CPNE6-204ENST00000557829 NRXN1Q9ULB1 1477 aa17.49■□□□□ 0.39
CPNE6-204ENST00000557829 NEXMIFQ5QGS0 1516 aa17.47■□□□□ 0.39
CPNE6-204ENST00000557829 PAK3O75914 559 aaPredicted RBP17.47■□□□□ 0.39
CPNE6-204ENST00000557829 TMF1P82094 1093 aa17.47■□□□□ 0.39
CPNE6-204ENST00000557829 EXOC6Q8TAG9 804 aa17.47■□□□□ 0.39
CPNE6-204ENST00000557829 ZBTB47Q9UFB7 747 aaPredicted RBP17.47■□□□□ 0.39
CPNE6-204ENST00000557829 CFAP70Q5T0N1 1121 aa17.46■□□□□ 0.39
CPNE6-204ENST00000557829 DISP3Q9P2K9 1392 aa17.46■□□□□ 0.39
CPNE6-204ENST00000557829 STAG3Q9UJ98 1225 aa17.46■□□□□ 0.39
CPNE6-204ENST00000557829 A2ML1A8K2U0 1454 aa17.45■□□□□ 0.38
CPNE6-204ENST00000557829 PIK3C2GO75747 1445 aa17.44■□□□□ 0.38
CPNE6-204ENST00000557829 DEKP35659 375 aaKnown RBP17.44■□□□□ 0.38
CPNE6-204ENST00000557829 LMTK3Q96Q04 1460 aa17.44■□□□□ 0.38
CPNE6-204ENST00000557829 PANK3Q9H999 370 aa17.43■□□□□ 0.38
CPNE6-204ENST00000557829 VGFO15240 615 aaPredicted RBP17.42■□□□□ 0.38
CPNE6-204ENST00000557829 SENP3Q9H4L4 574 aaPredicted RBP17.42■□□□□ 0.38
CPNE6-204ENST00000557829 SCAF11Q99590 1463 aaKnown RBP17.4■□□□□ 0.38
CPNE6-204ENST00000557829 SENP3-EIF4A1A0A087X0R7 540 aa17.4■□□□□ 0.38
CPNE6-204ENST00000557829 C14orf93Q9H972 538 aaKnown RBP17.4■□□□□ 0.38
CPNE6-204ENST00000557829 ZFYVE9O95405 1425 aa17.4■□□□□ 0.38
CPNE6-204ENST00000557829 SETD1BQ9UPS6 1966 aaKnown RBP17.39■□□□□ 0.37
CPNE6-204ENST00000557829 PDE4AP27815 886 aa17.39■□□□□ 0.37
CPNE6-204ENST00000557829 HSPA2P54652 639 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms