RNA–Protein interactions for RNA: ENST00000557729.1

LINC01956-201, Transcript of long intergenic non-protein coding RNA 1956, humanhuman

TSL 5 BASIC

Gene LINC01956, Length 695 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01956-201ENST00000557729 POLR1AO95602 1720 aaPredicted RBP29.49■■■□□ 2.31
LINC01956-201ENST00000557729 PPP1R15AO75807 674 aaPredicted RBP29.49■■■□□ 2.31
LINC01956-201ENST00000557729 RGL3Q3MIN7 710 aa29.48■■■□□ 2.31
LINC01956-201ENST00000557729 LTKP29376 864 aa29.47■■■□□ 2.31
LINC01956-201ENST00000557729 ZFYVE9O95405 1425 aa29.46■■■□□ 2.31
LINC01956-201ENST00000557729 RPGRIP1LQ68CZ1 1315 aa29.45■■■□□ 2.31
LINC01956-201ENST00000557729 SPATA31E1Q6ZUB1 1445 aa29.45■■■□□ 2.3
LINC01956-201ENST00000557729 NEURL4Q96JN8 1562 aa29.44■■■□□ 2.3
LINC01956-201ENST00000557729 NUTM2DQ5VT03 806 aaPredicted RBP29.43■■■□□ 2.3
LINC01956-201ENST00000557729 NPHP4O75161 1426 aaPredicted RBP29.43■■■□□ 2.3
LINC01956-201ENST00000557729 MED14O60244 1454 aa29.42■■■□□ 2.3
LINC01956-201ENST00000557729 BCANQ96GW7 911 aa29.41■■■□□ 2.3
LINC01956-201ENST00000557729 NEXMIFQ5QGS0 1516 aa29.4■■■□□ 2.3
LINC01956-201ENST00000557729 VGFO15240 615 aaPredicted RBP29.38■■■□□ 2.29
LINC01956-201ENST00000557729 NEUROD1Q13562 356 aa29.38■■■□□ 2.29
LINC01956-201ENST00000557729 SIN3AQ96ST3 1273 aa29.38■■■□□ 2.29
LINC01956-201ENST00000557729 IQGAP1P46940 1657 aa29.37■■■□□ 2.29
LINC01956-201ENST00000557729 PLEKHG1Q9ULL1 1385 aa29.36■■■□□ 2.29
LINC01956-201ENST00000557729 CCER1Q8TC90 406 aaPredicted RBP29.35■■■□□ 2.29
LINC01956-201ENST00000557729 SENP3Q9H4L4 574 aaPredicted RBP29.33■■■□□ 2.29
LINC01956-201ENST00000557729 PPLO60437 1756 aa29.33■■■□□ 2.29
LINC01956-201ENST00000557729 CLSPNQ9HAW4 1339 aa29.3■■■□□ 2.28
LINC01956-201ENST00000557729 DCAF11Q8TEB1 546 aa29.28■■■□□ 2.28
LINC01956-201ENST00000557729 IFT172Q9UG01 1749 aa29.28■■■□□ 2.28
LINC01956-201ENST00000557729 SLC26A8Q96RN1 970 aa29.27■■■□□ 2.28
LINC01956-201ENST00000557729 STAC3Q96MF2 364 aa29.26■■■□□ 2.27
LINC01956-201ENST00000557729 KDM2AQ9Y2K7 1162 aa29.26■■■□□ 2.27
LINC01956-201ENST00000557729 ADGRF5Q8IZF2 1346 aa29.24■■■□□ 2.27
LINC01956-201ENST00000557729 MYOM2P54296 1465 aa29.23■■■□□ 2.27
LINC01956-201ENST00000557729 SETBP1Q9Y6X0 1596 aa29.22■■■□□ 2.27
LINC01956-201ENST00000557729 TBX22Q9Y458 520 aa29.21■■■□□ 2.27
LINC01956-201ENST00000557729 TONSLQ96HA7 1378 aa29.21■■■□□ 2.27
LINC01956-201ENST00000557729 DIP2AQ14689 1571 aa29.2■■■□□ 2.26
LINC01956-201ENST00000557729 ADAMTS13Q76LX8 1427 aa29.2■■■□□ 2.26
LINC01956-201ENST00000557729 L3MBTL2Q969R5 705 aa29.19■■■□□ 2.26
LINC01956-201ENST00000557729 NRXN3Q9Y4C0 1643 aa29.16■■■□□ 2.26
LINC01956-201ENST00000557729 ZNF335Q9H4Z2 1342 aaPredicted RBP29.16■■■□□ 2.26
LINC01956-201ENST00000557729 PIK3C2GO75747 1445 aa29.15■■■□□ 2.26
LINC01956-201ENST00000557729 NRXN1Q9ULB1 1477 aa29.15■■■□□ 2.26
LINC01956-201ENST00000557729 ALKQ9UM73 1620 aa29.12■■■□□ 2.25
LINC01956-201ENST00000557729 PIK3R4Q99570 1358 aa29.12■■■□□ 2.25
LINC01956-201ENST00000557729 KCNA6P17658 529 aa29.09■■■□□ 2.25
LINC01956-201ENST00000557729 METP08581 1390 aa29.07■■■□□ 2.24
LINC01956-201ENST00000557729 C14orf93Q9H972 538 aaKnown RBP29.07■■■□□ 2.24
LINC01956-201ENST00000557729 CFAP70Q5T0N1 1121 aa29.06■■■□□ 2.24
LINC01956-201ENST00000557729 LAMC1P11047 1609 aa29.05■■■□□ 2.24
LINC01956-201ENST00000557729 TIMELESSQ9UNS1 1208 aa29.05■■■□□ 2.24
LINC01956-201ENST00000557729 CPS1P31327 1500 aa29.04■■■□□ 2.24
LINC01956-201ENST00000557729 PRAG1Q86YV5 1406 aa29.03■■■□□ 2.24
LINC01956-201ENST00000557729 SETD1AO15047 1707 aaKnown RBP29.03■■■□□ 2.24
LINC01956-201ENST00000557729 AMOTL2Q9Y2J4 779 aa29.03■■■□□ 2.24
LINC01956-201ENST00000557729 LTBP4Q8N2S1 1624 aa29.02■■■□□ 2.24
LINC01956-201ENST00000557729 CHD2O14647 1828 aaKnown RBP29.02■■■□□ 2.24
LINC01956-201ENST00000557729 NWD1Q149M9 1564 aa29.01■■■□□ 2.24
LINC01956-201ENST00000557729 PTPRUQ92729 1446 aa29■■■□□ 2.23
LINC01956-201ENST00000557729 STRCP1A6NGW2 1772 aa28.99■■■□□ 2.23
LINC01956-201ENST00000557729 TMEM132EQ6IEE7 984 aa28.99■■■□□ 2.23
LINC01956-201ENST00000557729 NKTRP30414 1462 aaKnown RBP28.98■■■□□ 2.23
LINC01956-201ENST00000557729 PROSER2Q86WR7 435 aaPredicted RBP28.97■■■□□ 2.23
LINC01956-201ENST00000557729 STK26Q9P289 416 aa28.95■■■□□ 2.22
LINC01956-201ENST00000557729 ASXL1Q8IXJ9 1541 aa28.94■■■□□ 2.22
LINC01956-201ENST00000557729 XRN1Q8IZH2 1706 aaKnown RBP28.94■■■□□ 2.22
LINC01956-201ENST00000557729 KIAA1210Q9ULL0 1709 aa28.94■■■□□ 2.22
LINC01956-201ENST00000557729 LRPPRCP42704 1394 aaKnown RBP28.93■■■□□ 2.22
LINC01956-201ENST00000557729 CERKQ8TCT0 537 aa28.93■■■□□ 2.22
LINC01956-201ENST00000557729 YTHDC2Q9H6S0 1430 aaKnown RBP28.93■■■□□ 2.22
LINC01956-201ENST00000557729 LRRC7Q96NW7 1537 aa28.92■■■□□ 2.22
LINC01956-201ENST00000557729 NBPF8Q3BBV2 869 aa28.91■■■□□ 2.22
LINC01956-201ENST00000557729 ADGRB1O14514 1584 aa28.9■■■□□ 2.22
LINC01956-201ENST00000557729 TMEM94Q12767 1356 aa28.88■■■□□ 2.21
LINC01956-201ENST00000557729 ABCC11Q96J66 1382 aa28.88■■■□□ 2.21
LINC01956-201ENST00000557729 NBPF1Q3BBV0 1214 aa28.88■■■□□ 2.21
LINC01956-201ENST00000557729 PTCH1Q13635 1447 aa28.87■■■□□ 2.21
LINC01956-201ENST00000557729 ROCK2O75116 1388 aaKnown RBP28.87■■■□□ 2.21
LINC01956-201ENST00000557729 TRPM1Q7Z4N2 1603 aa28.87■■■□□ 2.21
LINC01956-201ENST00000557729 RBM33Q96EV2 1170 aaKnown RBP28.86■■■□□ 2.21
LINC01956-201ENST00000557729 TECPR2O15040 1411 aa28.86■■■□□ 2.21
LINC01956-201ENST00000557729 C14orf37Q86TY3 774 aa28.85■■■□□ 2.21
LINC01956-201ENST00000557729 IQSEC2Q5JU85 1478 aa28.85■■■□□ 2.21
LINC01956-201ENST00000557729 KNDC1Q76NI1 1749 aa28.84■■■□□ 2.21
LINC01956-201ENST00000557729 TRAK1Q9UPV9 953 aa28.84■■■□□ 2.21
LINC01956-201ENST00000557729 ROBO2Q9HCK4 1378 aa28.84■■■□□ 2.21
LINC01956-201ENST00000557729 NCOA3Q9Y6Q9 1424 aa28.83■■■□□ 2.21
LINC01956-201ENST00000557729 RALGAPBQ86X10 1494 aa28.8■■■□□ 2.2
LINC01956-201ENST00000557729 SIRT1Q96EB6 747 aa28.8■■■□□ 2.2
LINC01956-201ENST00000557729 DLC1Q96QB1 1528 aa28.79■■■□□ 2.2
LINC01956-201ENST00000557729 FAM135BQ49AJ0 1406 aa28.78■■■□□ 2.2
LINC01956-201ENST00000557729 MSH6P52701 1360 aa28.78■■■□□ 2.2
LINC01956-201ENST00000557729 POGKQ9P215 609 aa28.78■■■□□ 2.2
LINC01956-201ENST00000557729 WAPLQ7Z5K2 1190 aa28.77■■■□□ 2.2
LINC01956-201ENST00000557729 CARD11Q9BXL7 1154 aa28.77■■■□□ 2.2
LINC01956-201ENST00000557729 XIRP1Q702N8 1843 aaKnown RBP28.77■■■□□ 2.2
LINC01956-201ENST00000557729 PRAM1Q96QH2 718 aa28.76■■■□□ 2.19
LINC01956-201ENST00000557729 GPRASP1Q5JY77 1395 aa28.75■■■□□ 2.19
LINC01956-201ENST00000557729 C19orf44Q9H6X5 657 aa28.73■■■□□ 2.19
LINC01956-201ENST00000557729 PLEKHH1Q9ULM0 1364 aa28.73■■■□□ 2.19
LINC01956-201ENST00000557729 SAFB2Q14151 953 aaKnown RBP eCLIP28.72■■■□□ 2.19
LINC01956-201ENST00000557729 ADGRL3Q9HAR2 1447 aa28.71■■■□□ 2.19
LINC01956-201ENST00000557729 TOM1O60784 492 aa28.7■■■□□ 2.18
LINC01956-201ENST00000557729 EIF3AQ14152 1382 aaKnown RBP28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms