RNA–Protein interactions for RNA: ENST00000557726.1

RDH11-211, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 621 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-211ENST00000557726 TMEM94Q12767 1356 aa19.6■□□□□ 0.73
RDH11-211ENST00000557726 CHGAP10645 457 aaKnown RBP19.6■□□□□ 0.73
RDH11-211ENST00000557726 ITGAEP38570 1179 aa19.6■□□□□ 0.73
RDH11-211ENST00000557726 HDGFP51858 240 aaKnown RBP19.6■□□□□ 0.73
RDH11-211ENST00000557726 UNC13BO14795 1591 aa19.6■□□□□ 0.73
RDH11-211ENST00000557726 PPARGC1BQ86YN6 1023 aaKnown RBP19.58■□□□□ 0.72
RDH11-211ENST00000557726 RBM33Q96EV2 1170 aaKnown RBP19.58■□□□□ 0.72
RDH11-211ENST00000557726 ROCK1Q13464 1354 aa19.57■□□□□ 0.72
RDH11-211ENST00000557726 RIMS2Q9UQ26 1411 aa19.57■□□□□ 0.72
RDH11-211ENST00000557726 E9PCH4 1651 aa19.56■□□□□ 0.72
RDH11-211ENST00000557726 TMEM131LA2VDJ0 1609 aa19.55■□□□□ 0.72
RDH11-211ENST00000557726 ZFYVE9O95405 1425 aa19.55■□□□□ 0.72
RDH11-211ENST00000557726 PLEKHG1Q9ULL1 1385 aa19.55■□□□□ 0.72
RDH11-211ENST00000557726 NKTRP30414 1462 aaKnown RBP19.54■□□□□ 0.72
RDH11-211ENST00000557726 FAM135BQ49AJ0 1406 aa19.54■□□□□ 0.72
RDH11-211ENST00000557726 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.53■□□□□ 0.72
RDH11-211ENST00000557726 IQGAP3Q86VI3 1631 aa19.53■□□□□ 0.72
RDH11-211ENST00000557726 NUP155O75694 1391 aa19.53■□□□□ 0.72
RDH11-211ENST00000557726 NWD1Q149M9 1564 aa19.53■□□□□ 0.72
RDH11-211ENST00000557726 MSH6P52701 1360 aa19.52■□□□□ 0.72
RDH11-211ENST00000557726 NUTM2DQ5VT03 806 aaPredicted RBP19.51■□□□□ 0.71
RDH11-211ENST00000557726 CHD2O14647 1828 aaKnown RBP19.51■□□□□ 0.71
RDH11-211ENST00000557726 ROBO1Q9Y6N7 1651 aa19.49■□□□□ 0.71
RDH11-211ENST00000557726 TBX22Q9Y458 520 aa19.49■□□□□ 0.71
RDH11-211ENST00000557726 C14orf37Q86TY3 774 aa19.47■□□□□ 0.71
RDH11-211ENST00000557726 SLAIN2Q9P270 581 aa19.45■□□□□ 0.7
RDH11-211ENST00000557726 DIP2AQ14689 1571 aa19.42■□□□□ 0.7
RDH11-211ENST00000557726 ADAMTS13Q76LX8 1427 aa19.42■□□□□ 0.7
RDH11-211ENST00000557726 PHLPP1O60346 1717 aa19.4■□□□□ 0.7
RDH11-211ENST00000557726 SPHKAPQ2M3C7 1700 aa19.4■□□□□ 0.7
RDH11-211ENST00000557726 ZNF326Q5BKZ1 582 aaKnown RBP19.4■□□□□ 0.7
RDH11-211ENST00000557726 PIK3R4Q99570 1358 aa19.4■□□□□ 0.7
RDH11-211ENST00000557726 RGS17Q9UGC6 210 aaPredicted RBP19.39■□□□□ 0.69
RDH11-211ENST00000557726 NCOA3Q9Y6Q9 1424 aa19.39■□□□□ 0.69
RDH11-211ENST00000557726 TRPM2O94759 1503 aa19.38■□□□□ 0.69
RDH11-211ENST00000557726 ATF3P18847 181 aa19.37■□□□□ 0.69
RDH11-211ENST00000557726 AMOTL2Q9Y2J4 779 aa19.37■□□□□ 0.69
RDH11-211ENST00000557726 CADPS2Q86UW7 1296 aa19.36■□□□□ 0.69
RDH11-211ENST00000557726 C19orf44Q9H6X5 657 aa19.36■□□□□ 0.69
RDH11-211ENST00000557726 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.36■□□□□ 0.69
RDH11-211ENST00000557726 RRBP1Q9P2E9 1410 aaKnown RBP19.34■□□□□ 0.69
RDH11-211ENST00000557726 JCADQ9P266 1359 aa19.33■□□□□ 0.69
RDH11-211ENST00000557726 PTPRUQ92729 1446 aa19.33■□□□□ 0.68
RDH11-211ENST00000557726 POTEAQ6S8J7 498 aa19.31■□□□□ 0.68
RDH11-211ENST00000557726 TRIM52Q96A61 297 aa19.31■□□□□ 0.68
RDH11-211ENST00000557726 KIF1BO60333 1816 aa19.3■□□□□ 0.68
RDH11-211ENST00000557726 NRXN3Q9Y4C0 1643 aa19.3■□□□□ 0.68
RDH11-211ENST00000557726 NAIPQ13075 1403 aa19.3■□□□□ 0.68
RDH11-211ENST00000557726 CLTCL1P53675 1640 aa19.29■□□□□ 0.68
RDH11-211ENST00000557726 COL16A1Q07092 1604 aaPredicted RBP19.29■□□□□ 0.68
RDH11-211ENST00000557726 SETBP1Q9Y6X0 1596 aa19.29■□□□□ 0.68
RDH11-211ENST00000557726 XRN1Q8IZH2 1706 aaKnown RBP19.27■□□□□ 0.68
RDH11-211ENST00000557726 MEX3CQ5U5Q3 659 aaKnown RBP19.26■□□□□ 0.67
RDH11-211ENST00000557726 METP08581 1390 aa19.25■□□□□ 0.67
RDH11-211ENST00000557726 AHDC1Q5TGY3 1603 aaPredicted RBP19.25■□□□□ 0.67
RDH11-211ENST00000557726 NEXMIFQ5QGS0 1516 aa19.25■□□□□ 0.67
RDH11-211ENST00000557726 BRINP3Q76B58 766 aa19.24■□□□□ 0.67
RDH11-211ENST00000557726 DCCP43146 1447 aa19.24■□□□□ 0.67
RDH11-211ENST00000557726 SPATA31A6Q5VVP1 1343 aa19.24■□□□□ 0.67
RDH11-211ENST00000557726 SLC4A1APQ9BWU0 796 aaKnown RBP19.23■□□□□ 0.67
RDH11-211ENST00000557726 HFM1A2PYH4 1435 aa19.22■□□□□ 0.67
RDH11-211ENST00000557726 VGFO15240 615 aaPredicted RBP19.2■□□□□ 0.66
RDH11-211ENST00000557726 SHPRHQ149N8 1683 aa19.2■□□□□ 0.66
RDH11-211ENST00000557726 LRP6O75581 1613 aa19.19■□□□□ 0.66
RDH11-211ENST00000557726 MST1RQ04912 1400 aa19.18■□□□□ 0.66
RDH11-211ENST00000557726 NUTM2BA6NNL0 878 aaPredicted RBP19.18■□□□□ 0.66
RDH11-211ENST00000557726 NUTM2EB1AL46 878 aaPredicted RBP19.18■□□□□ 0.66
RDH11-211ENST00000557726 NUTM2AQ8IVF1 878 aaPredicted RBP19.18■□□□□ 0.66
RDH11-211ENST00000557726 ASXL1Q8IXJ9 1541 aa19.18■□□□□ 0.66
RDH11-211ENST00000557726 ADGRL3Q9HAR2 1447 aa19.17■□□□□ 0.66
RDH11-211ENST00000557726 ZNF772Q68DY9 489 aaPredicted RBP19.17■□□□□ 0.66
RDH11-211ENST00000557726 RPGRIP1LQ68CZ1 1315 aa19.16■□□□□ 0.66
RDH11-211ENST00000557726 NALCNQ8IZF0 1738 aa19.15■□□□□ 0.66
RDH11-211ENST00000557726 SETD1AO15047 1707 aaKnown RBP19.14■□□□□ 0.66
RDH11-211ENST00000557726 FOXD1Q16676 465 aa19.13■□□□□ 0.65
RDH11-211ENST00000557726 LRRC59Q96AG4 307 aaKnown RBP19.13■□□□□ 0.65
RDH11-211ENST00000557726 NHSL1Q5SYE7 1610 aa19.13■□□□□ 0.65
RDH11-211ENST00000557726 PPLO60437 1756 aa19.12■□□□□ 0.65
RDH11-211ENST00000557726 SETD5Q9C0A6 1442 aa19.12■□□□□ 0.65
RDH11-211ENST00000557726 DDX17Q92841 729 aaKnown RBP19.12■□□□□ 0.65
RDH11-211ENST00000557726 PTCH1Q13635 1447 aa19.1■□□□□ 0.65
RDH11-211ENST00000557726 ROBO2Q9HCK4 1378 aa19.09■□□□□ 0.65
RDH11-211ENST00000557726 C1orf167Q5SNV9 1468 aa19.09■□□□□ 0.65
RDH11-211ENST00000557726 CCDC144AA2RUR9 1427 aa19.08■□□□□ 0.64
RDH11-211ENST00000557726 RXRBP28702 533 aa19.07■□□□□ 0.64
RDH11-211ENST00000557726 RGL3Q3MIN7 710 aa19.07■□□□□ 0.64
RDH11-211ENST00000557726 AFF2P51816 1311 aa19.06■□□□□ 0.64
RDH11-211ENST00000557726 PNPLA6Q8IY17 1366 aa19.06■□□□□ 0.64
RDH11-211ENST00000557726 C8orf37Q96NL8 207 aa19.05■□□□□ 0.64
RDH11-211ENST00000557726 ORAI2Q96SN7 254 aa19.05■□□□□ 0.64
RDH11-211ENST00000557726 MPHOSPH9Q99550 1183 aa19.05■□□□□ 0.64
RDH11-211ENST00000557726 ADGRF5Q8IZF2 1346 aa19.02■□□□□ 0.64
RDH11-211ENST00000557726 PRAG1Q86YV5 1406 aa19.02■□□□□ 0.64
RDH11-211ENST00000557726 STK26Q9P289 416 aa19.02■□□□□ 0.64
RDH11-211ENST00000557726 ADAMTS2O95450 1211 aa19■□□□□ 0.63
RDH11-211ENST00000557726 ANKRD30BQ9BXX2 1392 aa19■□□□□ 0.63
RDH11-211ENST00000557726 SOS2Q07890 1332 aaPredicted RBP19■□□□□ 0.63
RDH11-211ENST00000557726 ESCO1Q5FWF5 840 aa18.99■□□□□ 0.63
RDH11-211ENST00000557726 NGLY1Q96IV0 654 aa18.99■□□□□ 0.63
RDH11-211ENST00000557726 QTRT2Q9H974 415 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms