RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 SSTR3P32745 418 aaPredicted RBP8.93□□□□□ -0.98
EFCAB11-213ENST00000557685 IFFO2Q5TF58 517 aa8.93□□□□□ -0.98
EFCAB11-213ENST00000557685 GOPCQ9HD26 462 aa8.93□□□□□ -0.98
EFCAB11-213ENST00000557685 ONECUT3O60422 494 aaPredicted RBP8.91□□□□□ -0.98
EFCAB11-213ENST00000557685 RGS20O76081 388 aa8.91□□□□□ -0.98
EFCAB11-213ENST00000557685 FAM198AQ9UFP1 575 aa8.91□□□□□ -0.98
EFCAB11-213ENST00000557685 TSKSQ9UJT2 592 aa8.91□□□□□ -0.98
EFCAB11-213ENST00000557685 A0A0G2JS52 829 aa8.9□□□□□ -0.98
EFCAB11-213ENST00000557685 PACS2Q86VP3 889 aa8.9□□□□□ -0.98
EFCAB11-213ENST00000557685 EYA1Q99502 592 aa8.9□□□□□ -0.98
EFCAB11-213ENST00000557685 FAM217BQ9NTX9 383 aaPredicted RBP8.9□□□□□ -0.98
EFCAB11-213ENST00000557685 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.89□□□□□ -0.99
EFCAB11-213ENST00000557685 TRIM6-TRIM34B2RNG4 842 aa8.89□□□□□ -0.99
EFCAB11-213ENST00000557685 PROX2Q3B8N5 592 aa8.89□□□□□ -0.99
EFCAB11-213ENST00000557685 C14orf37Q86TY3 774 aa8.89□□□□□ -0.99
EFCAB11-213ENST00000557685 ANKK1Q8NFD2 765 aa8.89□□□□□ -0.99
EFCAB11-213ENST00000557685 RABGEF1Q9UJ41 708 aa8.89□□□□□ -0.99
EFCAB11-213ENST00000557685 RCCD1A6NED2 376 aa8.87□□□□□ -0.99
EFCAB11-213ENST00000557685 NBPF26B4DH59 902 aa8.87□□□□□ -0.99
EFCAB11-213ENST00000557685 NUDT18Q6ZVK8 323 aa8.87□□□□□ -0.99
EFCAB11-213ENST00000557685 NLRP7Q8WX94 980 aa8.87□□□□□ -0.99
EFCAB11-213ENST00000557685 TATDN2Q93075 761 aa8.87□□□□□ -0.99
EFCAB11-213ENST00000557685 IRX2Q9BZI1 471 aaPredicted RBP8.87□□□□□ -0.99
EFCAB11-213ENST00000557685 BEGAINQ9BUH8 593 aa8.86□□□□□ -0.99
EFCAB11-213ENST00000557685 RSPH6AQ9H0K4 717 aa8.86□□□□□ -0.99
EFCAB11-213ENST00000557685 PNMA3Q9UL41 463 aa8.85□□□□□ -0.99
EFCAB11-213ENST00000557685 BCAMP50895 628 aa8.84□□□□□ -0.99
EFCAB11-213ENST00000557685 SH3D19Q5HYK7 790 aa8.84□□□□□ -0.99
EFCAB11-213ENST00000557685 C3orf80F5H4A9 247 aa8.83□□□□□ -1
EFCAB11-213ENST00000557685 DNAJB2P25686 324 aa8.83□□□□□ -1
EFCAB11-213ENST00000557685 SKIV2LQ15477 1246 aaKnown RBP8.83□□□□□ -1
EFCAB11-213ENST00000557685 LAPTM4BQ86VI4 370 aa8.83□□□□□ -1
EFCAB11-213ENST00000557685 PCMTD1Q96MG8 357 aaPredicted RBP8.83□□□□□ -1
EFCAB11-213ENST00000557685 KIAA1468Q9P260 1216 aa8.83□□□□□ -1
EFCAB11-213ENST00000557685 DIXDC1Q155Q3 683 aa8.82□□□□□ -1
EFCAB11-213ENST00000557685 SULF1Q8IWU6 871 aa8.82□□□□□ -1
EFCAB11-213ENST00000557685 SOWAHBA6NEL2 793 aa8.81□□□□□ -1
EFCAB11-213ENST00000557685 ZFRQ96KR1 1074 aaKnown RBP8.8□□□□□ -1
EFCAB11-213ENST00000557685 TMEM134Q9H6X4 195 aa8.8□□□□□ -1
EFCAB11-213ENST00000557685 ITGBL1O95965 494 aaPredicted RBP8.79□□□□□ -1
EFCAB11-213ENST00000557685 SMAPO00193 183 aa8.78□□□□□ -1
EFCAB11-213ENST00000557685 CD46P15529 392 aa8.78□□□□□ -1
EFCAB11-213ENST00000557685 NYAP1Q6ZVC0 841 aa8.78□□□□□ -1
EFCAB11-213ENST00000557685 SEPT9Q9UHD8 586 aaPredicted RBP8.78□□□□□ -1
EFCAB11-213ENST00000557685 TBC1D2Q9BYX2 928 aa8.77□□□□□ -1.01
EFCAB11-213ENST00000557685 WBP1LQ9NX94 342 aa8.77□□□□□ -1.01
EFCAB11-213ENST00000557685 DDX11L8A8MPP1 907 aa8.76□□□□□ -1.01
EFCAB11-213ENST00000557685 RSPH4AQ5TD94 716 aa8.76□□□□□ -1.01
EFCAB11-213ENST00000557685 MYSM1Q5VVJ2 828 aa8.76□□□□□ -1.01
EFCAB11-213ENST00000557685 KCNC4Q03721 635 aa8.75□□□□□ -1.01
EFCAB11-213ENST00000557685 POLR3EQ9NVU0 708 aa8.75□□□□□ -1.01
EFCAB11-213ENST00000557685 HDGFP51858 240 aaKnown RBP8.74□□□□□ -1.01
EFCAB11-213ENST00000557685 FLIIQ13045 1269 aa8.74□□□□□ -1.01
EFCAB11-213ENST00000557685 FAM98CQ17RN3 349 aaKnown RBP8.74□□□□□ -1.01
EFCAB11-213ENST00000557685 NUTM1Q86Y26 1132 aa8.74□□□□□ -1.01
EFCAB11-213ENST00000557685 PROCA1Q8NCQ7 364 aaPredicted RBP8.74□□□□□ -1.01
EFCAB11-213ENST00000557685 SPIRE2Q8WWL2 714 aa8.74□□□□□ -1.01
EFCAB11-213ENST00000557685 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.74□□□□□ -1.01
EFCAB11-213ENST00000557685 ATP1B4Q9UN42 357 aaPredicted RBP8.74□□□□□ -1.01
EFCAB11-213ENST00000557685 LRCH3Q96II8 777 aa8.73□□□□□ -1.01
EFCAB11-213ENST00000557685 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.73□□□□□ -1.01
EFCAB11-213ENST00000557685 TSR3Q9UJK0 312 aaKnown RBP8.73□□□□□ -1.01
EFCAB11-213ENST00000557685 HPS5Q9UPZ3 1129 aa8.73□□□□□ -1.01
EFCAB11-213ENST00000557685 CLK2P49760 499 aaKnown RBP8.72□□□□□ -1.01
EFCAB11-213ENST00000557685 GJA5P36382 358 aa8.71□□□□□ -1.02
EFCAB11-213ENST00000557685 RIC3Q7Z5B4 369 aa8.71□□□□□ -1.02
EFCAB11-213ENST00000557685 RDH13Q8NBN7 331 aa8.71□□□□□ -1.02
EFCAB11-213ENST00000557685 ZMYND15Q9H091 742 aa8.71□□□□□ -1.02
EFCAB11-213ENST00000557685 SLC4A3P48751 1232 aa8.7□□□□□ -1.02
EFCAB11-213ENST00000557685 TUSC1Q2TAM9 212 aa8.7□□□□□ -1.02
EFCAB11-213ENST00000557685 SWT1Q5T5J6 900 aaKnown RBP8.7□□□□□ -1.02
EFCAB11-213ENST00000557685 SPTLC1O15269 473 aa8.69□□□□□ -1.02
EFCAB11-213ENST00000557685 GCGRP47871 477 aa8.69□□□□□ -1.02
EFCAB11-213ENST00000557685 Q6ZNB5 142 aa8.69□□□□□ -1.02
EFCAB11-213ENST00000557685 KDM4AO75164 1064 aa8.68□□□□□ -1.02
EFCAB11-213ENST00000557685 USP46P62068 366 aa8.68□□□□□ -1.02
EFCAB11-213ENST00000557685 LIMD1Q9UGP4 676 aa8.68□□□□□ -1.02
EFCAB11-213ENST00000557685 SLC10A3P09131 477 aa8.67□□□□□ -1.02
EFCAB11-213ENST00000557685 PPP4CP60510 307 aa8.67□□□□□ -1.02
EFCAB11-213ENST00000557685 RSBN1LQ6PCB5 846 aaPredicted RBP8.67□□□□□ -1.02
EFCAB11-213ENST00000557685 SLF2Q8IX21 1173 aa8.67□□□□□ -1.02
EFCAB11-213ENST00000557685 MOXD2PA6NHM9 499 aa8.66□□□□□ -1.02
EFCAB11-213ENST00000557685 PPP2R2DQ66LE6 453 aa8.66□□□□□ -1.02
EFCAB11-213ENST00000557685 SAMD7Q7Z3H4 446 aa8.65□□□□□ -1.02
EFCAB11-213ENST00000557685 NDUFV2P19404 249 aa8.64□□□□□ -1.03
EFCAB11-213ENST00000557685 RFC5P40937 340 aa8.64□□□□□ -1.03
EFCAB11-213ENST00000557685 TMEM259Q4ZIN3 620 aa8.64□□□□□ -1.03
EFCAB11-213ENST00000557685 BANK1Q8NDB2 785 aa8.63□□□□□ -1.03
EFCAB11-213ENST00000557685 HOXA2O43364 376 aa8.62□□□□□ -1.03
EFCAB11-213ENST00000557685 LILRB3O75022 631 aa8.62□□□□□ -1.03
EFCAB11-213ENST00000557685 PRPF38BQ5VTL8 546 aaKnown RBP8.62□□□□□ -1.03
EFCAB11-213ENST00000557685 PCDHB15Q9Y5E8 787 aa8.62□□□□□ -1.03
EFCAB11-213ENST00000557685 SUPT5HO00267 1087 aaKnown RBP8.61□□□□□ -1.03
EFCAB11-213ENST00000557685 MCM6Q14566 821 aa8.61□□□□□ -1.03
EFCAB11-213ENST00000557685 GRIPAP1Q4V328 841 aa8.61□□□□□ -1.03
EFCAB11-213ENST00000557685 NECTIN2Q92692 538 aa8.61□□□□□ -1.03
EFCAB11-213ENST00000557685 CSPP1Q1MSJ5 1256 aa8.6□□□□□ -1.03
EFCAB11-213ENST00000557685 FBXO31Q5XUX0 539 aaPredicted RBP8.6□□□□□ -1.03
EFCAB11-213ENST00000557685 SPDYE5A6NIY4 337 aa8.59□□□□□ -1.03
EFCAB11-213ENST00000557685 A6NJR5 290 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms