RNA–Protein interactions for RNA: ENST00000557659.5

CNIH1-206, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 2

Gene CNIH1, Length 856 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-206ENST00000557659 SPDYE4A6NLX3 237 aa17.04■□□□□ 0.32
CNIH1-206ENST00000557659 HSPA2P54652 639 aa17.04■□□□□ 0.32
CNIH1-206ENST00000557659 PROM2Q8N271 834 aa17.04■□□□□ 0.32
CNIH1-206ENST00000557659 SPHKAPQ2M3C7 1700 aa17.04■□□□□ 0.32
CNIH1-206ENST00000557659 RAB3GAP2Q9H2M9 1393 aa17.03■□□□□ 0.32
CNIH1-206ENST00000557659 STAG3Q9UJ98 1225 aa17.03■□□□□ 0.32
CNIH1-206ENST00000557659 UBR1Q8IWV7 1749 aa17.03■□□□□ 0.32
CNIH1-206ENST00000557659 PIK3C2BO00750 1634 aa17.03■□□□□ 0.32
CNIH1-206ENST00000557659 PTPRTO14522 1441 aa17.02■□□□□ 0.31
CNIH1-206ENST00000557659 CAPN15O75808 1086 aa17.01■□□□□ 0.31
CNIH1-206ENST00000557659 TRIM26Q12899 539 aaPredicted RBP17.01■□□□□ 0.31
CNIH1-206ENST00000557659 ADGRB3O60242 1522 aa17.01■□□□□ 0.31
CNIH1-206ENST00000557659 IDI1Q13907 227 aa17■□□□□ 0.31
CNIH1-206ENST00000557659 TRPM2O94759 1503 aa17■□□□□ 0.31
CNIH1-206ENST00000557659 STRCQ7RTU9 1775 aa17■□□□□ 0.31
CNIH1-206ENST00000557659 POLR1AO95602 1720 aaPredicted RBP16.99■□□□□ 0.31
CNIH1-206ENST00000557659 HDGFP51858 240 aaKnown RBP16.99■□□□□ 0.31
CNIH1-206ENST00000557659 ANKLE2Q86XL3 938 aa16.99■□□□□ 0.31
CNIH1-206ENST00000557659 SLIT1O75093 1534 aa16.99■□□□□ 0.31
CNIH1-206ENST00000557659 MPHOSPH9Q99550 1183 aa16.98■□□□□ 0.31
CNIH1-206ENST00000557659 EID1Q9Y6B2 187 aa16.97■□□□□ 0.31
CNIH1-206ENST00000557659 ARHGAP23Q9P227 1491 aa16.97■□□□□ 0.31
CNIH1-206ENST00000557659 MED14O60244 1454 aa16.95■□□□□ 0.3
CNIH1-206ENST00000557659 TMEM2Q9UHN6 1383 aa16.95■□□□□ 0.3
CNIH1-206ENST00000557659 TMEM131LA2VDJ0 1609 aa16.94■□□□□ 0.3
CNIH1-206ENST00000557659 SCAF11Q99590 1463 aaKnown RBP16.93■□□□□ 0.3
CNIH1-206ENST00000557659 KIF1BO60333 1816 aa16.92■□□□□ 0.3
CNIH1-206ENST00000557659 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.92■□□□□ 0.3
CNIH1-206ENST00000557659 CCDC144AA2RUR9 1427 aa16.91■□□□□ 0.3
CNIH1-206ENST00000557659 NCKAP5LQ9HCH0 1330 aa16.9■□□□□ 0.3
CNIH1-206ENST00000557659 NEURL4Q96JN8 1562 aa16.89■□□□□ 0.3
CNIH1-206ENST00000557659 CLTCL1P53675 1640 aa16.89■□□□□ 0.29
CNIH1-206ENST00000557659 NPHP4O75161 1426 aaPredicted RBP16.89■□□□□ 0.29
CNIH1-206ENST00000557659 IQGAP1P46940 1657 aa16.89■□□□□ 0.29
CNIH1-206ENST00000557659 TXNDC2Q86VQ3 553 aa16.89■□□□□ 0.29
CNIH1-206ENST00000557659 CHGAP10645 457 aaKnown RBP16.88■□□□□ 0.29
CNIH1-206ENST00000557659 ZFYVE9O95405 1425 aa16.87■□□□□ 0.29
CNIH1-206ENST00000557659 MYO5BQ9ULV0 1848 aa16.86■□□□□ 0.29
CNIH1-206ENST00000557659 RPGRIP1LQ68CZ1 1315 aa16.86■□□□□ 0.29
CNIH1-206ENST00000557659 RIMS2Q9UQ26 1411 aa16.86■□□□□ 0.29
CNIH1-206ENST00000557659 PPP1R15AO75807 674 aaPredicted RBP16.84■□□□□ 0.29
CNIH1-206ENST00000557659 FBXO3Q9UK99 471 aa16.84■□□□□ 0.29
CNIH1-206ENST00000557659 LTKP29376 864 aa16.83■□□□□ 0.28
CNIH1-206ENST00000557659 ZNF326Q5BKZ1 582 aaKnown RBP16.83■□□□□ 0.28
CNIH1-206ENST00000557659 PLEKHG1Q9ULL1 1385 aa16.83■□□□□ 0.28
CNIH1-206ENST00000557659 ABCB7O75027 752 aa16.81■□□□□ 0.28
CNIH1-206ENST00000557659 DIP2AQ14689 1571 aa16.81■□□□□ 0.28
CNIH1-206ENST00000557659 ANKRD30BQ9BXX2 1392 aa16.8■□□□□ 0.28
CNIH1-206ENST00000557659 VGFO15240 615 aaPredicted RBP16.8■□□□□ 0.28
CNIH1-206ENST00000557659 CPS1P31327 1500 aa16.79■□□□□ 0.28
CNIH1-206ENST00000557659 STAC3Q96MF2 364 aa16.78■□□□□ 0.28
CNIH1-206ENST00000557659 NEXMIFQ5QGS0 1516 aa16.78■□□□□ 0.28
CNIH1-206ENST00000557659 IQSEC2Q5JU85 1478 aa16.78■□□□□ 0.28
CNIH1-206ENST00000557659 SLC24A1O60721 1099 aa16.77■□□□□ 0.28
CNIH1-206ENST00000557659 BCANQ96GW7 911 aa16.77■□□□□ 0.28
CNIH1-206ENST00000557659 SPATA31E1Q6ZUB1 1445 aa16.77■□□□□ 0.27
CNIH1-206ENST00000557659 SETBP1Q9Y6X0 1596 aa16.76■□□□□ 0.27
CNIH1-206ENST00000557659 PIK3R4Q99570 1358 aa16.76■□□□□ 0.27
CNIH1-206ENST00000557659 PPLO60437 1756 aa16.75■□□□□ 0.27
CNIH1-206ENST00000557659 ZBTB12Q9Y330 459 aaPredicted RBP16.75■□□□□ 0.27
CNIH1-206ENST00000557659 TBX22Q9Y458 520 aa16.75■□□□□ 0.27
CNIH1-206ENST00000557659 LTBP4Q8N2S1 1624 aa16.74■□□□□ 0.27
CNIH1-206ENST00000557659 ZNF335Q9H4Z2 1342 aaPredicted RBP16.72■□□□□ 0.27
CNIH1-206ENST00000557659 IFT172Q9UG01 1749 aa16.72■□□□□ 0.27
CNIH1-206ENST00000557659 CERKQ8TCT0 537 aa16.71■□□□□ 0.27
CNIH1-206ENST00000557659 NKTRP30414 1462 aaKnown RBP16.7■□□□□ 0.26
CNIH1-206ENST00000557659 KCNA6P17658 529 aa16.7■□□□□ 0.26
CNIH1-206ENST00000557659 DSG3P32926 999 aa16.7■□□□□ 0.26
CNIH1-206ENST00000557659 ADAMTS13Q76LX8 1427 aa16.7■□□□□ 0.26
CNIH1-206ENST00000557659 NWD1Q149M9 1564 aa16.69■□□□□ 0.26
CNIH1-206ENST00000557659 MYOM2P54296 1465 aa16.69■□□□□ 0.26
CNIH1-206ENST00000557659 RGL3Q3MIN7 710 aa16.69■□□□□ 0.26
CNIH1-206ENST00000557659 DHX57Q6P158 1386 aaKnown RBP16.68■□□□□ 0.26
CNIH1-206ENST00000557659 SLC26A8Q96RN1 970 aa16.68■□□□□ 0.26
CNIH1-206ENST00000557659 NRXN3Q9Y4C0 1643 aa16.67■□□□□ 0.26
CNIH1-206ENST00000557659 VASPP50552 380 aaPredicted RBP16.67■□□□□ 0.26
CNIH1-206ENST00000557659 NUTM2DQ5VT03 806 aaPredicted RBP16.67■□□□□ 0.26
CNIH1-206ENST00000557659 CHD2O14647 1828 aaKnown RBP16.67■□□□□ 0.26
CNIH1-206ENST00000557659 LAMC1P11047 1609 aa16.66■□□□□ 0.26
CNIH1-206ENST00000557659 PCGF6Q9BYE7 350 aa16.65■□□□□ 0.26
CNIH1-206ENST00000557659 NCOA3Q9Y6Q9 1424 aa16.64■□□□□ 0.25
CNIH1-206ENST00000557659 NRXN1Q9ULB1 1477 aa16.64■□□□□ 0.25
CNIH1-206ENST00000557659 ALKQ9UM73 1620 aa16.63■□□□□ 0.25
CNIH1-206ENST00000557659 PIK3C2GO75747 1445 aa16.63■□□□□ 0.25
CNIH1-206ENST00000557659 CLSPNQ9HAW4 1339 aa16.63■□□□□ 0.25
CNIH1-206ENST00000557659 STRCP1A6NGW2 1772 aa16.62■□□□□ 0.25
CNIH1-206ENST00000557659 LRRC7Q96NW7 1537 aa16.61■□□□□ 0.25
CNIH1-206ENST00000557659 PRAG1Q86YV5 1406 aa16.61■□□□□ 0.25
CNIH1-206ENST00000557659 SETD1AO15047 1707 aaKnown RBP16.6■□□□□ 0.25
CNIH1-206ENST00000557659 DCAF11Q8TEB1 546 aa16.6■□□□□ 0.25
CNIH1-206ENST00000557659 FBXO41Q8TF61 875 aa16.6■□□□□ 0.25
CNIH1-206ENST00000557659 ADGRF5Q8IZF2 1346 aa16.6■□□□□ 0.25
CNIH1-206ENST00000557659 PROSER2Q86WR7 435 aaPredicted RBP16.59■□□□□ 0.25
CNIH1-206ENST00000557659 XRN1Q8IZH2 1706 aaKnown RBP16.59■□□□□ 0.25
CNIH1-206ENST00000557659 AMOTL2Q9Y2J4 779 aa16.58■□□□□ 0.24
CNIH1-206ENST00000557659 PTCH1Q13635 1447 aa16.57■□□□□ 0.24
CNIH1-206ENST00000557659 METP08581 1390 aa16.57■□□□□ 0.24
CNIH1-206ENST00000557659 TOM1O60784 492 aa16.57■□□□□ 0.24
CNIH1-206ENST00000557659 C14orf93Q9H972 538 aaKnown RBP16.57■□□□□ 0.24
CNIH1-206ENST00000557659 IFNLR1Q8IU57 520 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms