RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 CLTCQ00610 1675 aaKnown RBP14.55□□□□□ -0.08
GABRB3-212ENST00000557641 SPATA31D1Q6ZQQ2 1576 aa14.54□□□□□ -0.08
GABRB3-212ENST00000557641 MROH2AA6NES4 1674 aa14.54□□□□□ -0.08
GABRB3-212ENST00000557641 PREX1Q8TCU6 1659 aa14.53□□□□□ -0.08
GABRB3-212ENST00000557641 PIK3C2BO00750 1634 aa14.53□□□□□ -0.08
GABRB3-212ENST00000557641 SYNMO15061 1565 aa14.53□□□□□ -0.08
GABRB3-212ENST00000557641 IDI1Q13907 227 aa14.53□□□□□ -0.08
GABRB3-212ENST00000557641 NBPF8Q3BBV2 869 aa14.53□□□□□ -0.08
GABRB3-212ENST00000557641 FBXO31Q5XUX0 539 aaPredicted RBP14.53□□□□□ -0.08
GABRB3-212ENST00000557641 KDM2AQ9Y2K7 1162 aa14.53□□□□□ -0.08
GABRB3-212ENST00000557641 ADGRB3O60242 1522 aa14.52□□□□□ -0.08
GABRB3-212ENST00000557641 UGGT1Q9NYU2 1555 aa14.51□□□□□ -0.09
GABRB3-212ENST00000557641 PRAG1Q86YV5 1406 aa14.51□□□□□ -0.09
GABRB3-212ENST00000557641 KIF1BO60333 1816 aa14.5□□□□□ -0.09
GABRB3-212ENST00000557641 CHGAP10645 457 aaKnown RBP14.5□□□□□ -0.09
GABRB3-212ENST00000557641 MYOM2P54296 1465 aa14.5□□□□□ -0.09
GABRB3-212ENST00000557641 RALGAPBQ86X10 1494 aa14.5□□□□□ -0.09
GABRB3-212ENST00000557641 TNRQ92752 1358 aa14.49□□□□□ -0.09
GABRB3-212ENST00000557641 ZNF326Q5BKZ1 582 aaKnown RBP14.49□□□□□ -0.09
GABRB3-212ENST00000557641 EIF4G2P78344 907 aaKnown RBP eCLIP14.48□□□□□ -0.09
GABRB3-212ENST00000557641 VGFO15240 615 aaPredicted RBP14.47□□□□□ -0.09
GABRB3-212ENST00000557641 STAG3Q9UJ98 1225 aa14.47□□□□□ -0.09
GABRB3-212ENST00000557641 NLRP1Q9C000 1473 aa14.46□□□□□ -0.09
GABRB3-212ENST00000557641 ZBTB12Q9Y330 459 aaPredicted RBP14.46□□□□□ -0.09
GABRB3-212ENST00000557641 ZFYVE9O95405 1425 aa14.46□□□□□ -0.09
GABRB3-212ENST00000557641 GPRASP1Q5JY77 1395 aa14.45□□□□□ -0.1
GABRB3-212ENST00000557641 FER1L4A9Z1Z3 1794 aa14.45□□□□□ -0.1
GABRB3-212ENST00000557641 NRXN1Q9ULB1 1477 aa14.44□□□□□ -0.1
GABRB3-212ENST00000557641 HDGFP51858 240 aaKnown RBP14.44□□□□□ -0.1
GABRB3-212ENST00000557641 CARD11Q9BXL7 1154 aa14.44□□□□□ -0.1
GABRB3-212ENST00000557641 ROCK2O75116 1388 aaKnown RBP14.44□□□□□ -0.1
GABRB3-212ENST00000557641 TMEM131LA2VDJ0 1609 aa14.43□□□□□ -0.1
GABRB3-212ENST00000557641 CFAP65Q6ZU64 1925 aaKnown RBP14.43□□□□□ -0.1
GABRB3-212ENST00000557641 ADAMTSL3P82987 1691 aa14.42□□□□□ -0.1
GABRB3-212ENST00000557641 HSPA5P11021 654 aaKnown RBP14.42□□□□□ -0.1
GABRB3-212ENST00000557641 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.42□□□□□ -0.1
GABRB3-212ENST00000557641 A2ML1A8K2U0 1454 aa14.42□□□□□ -0.1
GABRB3-212ENST00000557641 MADDQ8WXG6 1647 aa14.41□□□□□ -0.1
GABRB3-212ENST00000557641 CEBPAP49715 358 aaPredicted RBP14.41□□□□□ -0.1
GABRB3-212ENST00000557641 KDM5AP29375 1690 aaKnown RBP14.41□□□□□ -0.1
GABRB3-212ENST00000557641 TRPM1Q7Z4N2 1603 aa14.41□□□□□ -0.1
GABRB3-212ENST00000557641 ADGRF5Q8IZF2 1346 aa14.41□□□□□ -0.1
GABRB3-212ENST00000557641 C3P01024 1663 aa14.4□□□□□ -0.1
GABRB3-212ENST00000557641 IFT172Q9UG01 1749 aa14.4□□□□□ -0.1
GABRB3-212ENST00000557641 LAMC1P11047 1609 aa14.4□□□□□ -0.1
GABRB3-212ENST00000557641 NEXMIFQ5QGS0 1516 aa14.4□□□□□ -0.1
GABRB3-212ENST00000557641 USP47Q96K76 1375 aa14.39□□□□□ -0.11
GABRB3-212ENST00000557641 PIK3C2GO75747 1445 aa14.39□□□□□ -0.11
GABRB3-212ENST00000557641 KIAA1210Q9ULL0 1709 aa14.38□□□□□ -0.11
GABRB3-212ENST00000557641 PPLO60437 1756 aa14.38□□□□□ -0.11
GABRB3-212ENST00000557641 C14orf93Q9H972 538 aaKnown RBP14.38□□□□□ -0.11
GABRB3-212ENST00000557641 NBPF1Q3BBV0 1214 aa14.37□□□□□ -0.11
GABRB3-212ENST00000557641 RIMS2Q9UQ26 1411 aa14.37□□□□□ -0.11
GABRB3-212ENST00000557641 THEMISQ8N1K5 641 aaPredicted RBP14.36□□□□□ -0.11
GABRB3-212ENST00000557641 RIMS1Q86UR5 1692 aaKnown RBP14.36□□□□□ -0.11
GABRB3-212ENST00000557641 SLC24A1O60721 1099 aa14.35□□□□□ -0.11
GABRB3-212ENST00000557641 CFAP70Q5T0N1 1121 aa14.35□□□□□ -0.11
GABRB3-212ENST00000557641 TMEM2Q9UHN6 1383 aa14.34□□□□□ -0.11
GABRB3-212ENST00000557641 SCAF11Q99590 1463 aaKnown RBP14.34□□□□□ -0.11
GABRB3-212ENST00000557641 SETBP1Q9Y6X0 1596 aa14.34□□□□□ -0.11
GABRB3-212ENST00000557641 EIF3AQ14152 1382 aaKnown RBP14.34□□□□□ -0.11
GABRB3-212ENST00000557641 PTPRMP28827 1452 aa14.32□□□□□ -0.12
GABRB3-212ENST00000557641 DIEXFQ68CQ4 756 aaKnown RBP14.32□□□□□ -0.12
GABRB3-212ENST00000557641 EID1Q9Y6B2 187 aa14.32□□□□□ -0.12
GABRB3-212ENST00000557641 ST20-MTHFSA0A0A6YYL1 179 aa14.31□□□□□ -0.12
GABRB3-212ENST00000557641 HIRIP3Q9BW71 556 aaPredicted RBP14.31□□□□□ -0.12
GABRB3-212ENST00000557641 UBR1Q8IWV7 1749 aa14.31□□□□□ -0.12
GABRB3-212ENST00000557641 ARHGAP23Q9P227 1491 aa14.3□□□□□ -0.12
GABRB3-212ENST00000557641 SLIT1O75093 1534 aa14.3□□□□□ -0.12
GABRB3-212ENST00000557641 MYO3AQ8NEV4 1616 aa14.3□□□□□ -0.12
GABRB3-212ENST00000557641 NUTM2DQ5VT03 806 aaPredicted RBP14.29□□□□□ -0.12
GABRB3-212ENST00000557641 ADGRB1O14514 1584 aa14.28□□□□□ -0.12
GABRB3-212ENST00000557641 MKRN4PQ13434 485 aaPredicted RBP14.28□□□□□ -0.12
GABRB3-212ENST00000557641 PLEKHG1Q9ULL1 1385 aa14.28□□□□□ -0.12
GABRB3-212ENST00000557641 MYO5BQ9ULV0 1848 aa14.28□□□□□ -0.12
GABRB3-212ENST00000557641 CEP170BQ9Y4F5 1589 aaPredicted RBP14.27□□□□□ -0.12
GABRB3-212ENST00000557641 TXNDC2Q86VQ3 553 aa14.27□□□□□ -0.13
GABRB3-212ENST00000557641 SETD1BQ9UPS6 1966 aaKnown RBP14.27□□□□□ -0.13
GABRB3-212ENST00000557641 CCDC7Q96M83 1385 aa14.26□□□□□ -0.13
GABRB3-212ENST00000557641 IQGAP1P46940 1657 aa14.26□□□□□ -0.13
GABRB3-212ENST00000557641 WASHC2AQ641Q2 1341 aa14.25□□□□□ -0.13
GABRB3-212ENST00000557641 TMF1P82094 1093 aa14.25□□□□□ -0.13
GABRB3-212ENST00000557641 CDCA8Q53HL2 280 aa14.25□□□□□ -0.13
GABRB3-212ENST00000557641 TESK2Q96S53 571 aa14.25□□□□□ -0.13
GABRB3-212ENST00000557641 ZNF142P52746 1687 aaPredicted RBP14.25□□□□□ -0.13
GABRB3-212ENST00000557641 ALKQ9UM73 1620 aa14.25□□□□□ -0.13
GABRB3-212ENST00000557641 SBNO2Q9Y2G9 1366 aa14.24□□□□□ -0.13
GABRB3-212ENST00000557641 KIF7Q2M1P5 1343 aa14.24□□□□□ -0.13
GABRB3-212ENST00000557641 LTKP29376 864 aa14.24□□□□□ -0.13
GABRB3-212ENST00000557641 TMEM132EQ6IEE7 984 aa14.23□□□□□ -0.13
GABRB3-212ENST00000557641 ANKLE2Q86XL3 938 aa14.23□□□□□ -0.13
GABRB3-212ENST00000557641 CENPJQ9HC77 1338 aaPredicted RBP14.22□□□□□ -0.13
GABRB3-212ENST00000557641 C11orf95C9JLR9 678 aaPredicted RBP14.22□□□□□ -0.13
GABRB3-212ENST00000557641 DDX10Q13206 875 aaKnown RBP14.22□□□□□ -0.13
GABRB3-212ENST00000557641 BCANQ96GW7 911 aa14.22□□□□□ -0.13
GABRB3-212ENST00000557641 TRAK1Q9UPV9 953 aa14.22□□□□□ -0.13
GABRB3-212ENST00000557641 YTHDC2Q9H6S0 1430 aaKnown RBP14.22□□□□□ -0.13
GABRB3-212ENST00000557641 LRPPRCP42704 1394 aaKnown RBP14.22□□□□□ -0.13
GABRB3-212ENST00000557641 SIRT1Q96EB6 747 aa14.21□□□□□ -0.13
GABRB3-212ENST00000557641 TBX22Q9Y458 520 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms