RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 TXNDC2Q86VQ3 553 aa23.68■■□□□ 1.38
TUBB3-214ENST00000557490 TMEM2Q9UHN6 1383 aa23.67■■□□□ 1.38
TUBB3-214ENST00000557490 SLC4A1APQ9BWU0 796 aaKnown RBP23.67■■□□□ 1.38
TUBB3-214ENST00000557490 ARHGAP23Q9P227 1491 aa23.67■■□□□ 1.38
TUBB3-214ENST00000557490 FAM135BQ49AJ0 1406 aa23.67■■□□□ 1.38
TUBB3-214ENST00000557490 ADGRB3O60242 1522 aa23.66■■□□□ 1.38
TUBB3-214ENST00000557490 SLIT1O75093 1534 aa23.66■■□□□ 1.38
TUBB3-214ENST00000557490 SETD5Q9C0A6 1442 aa23.66■■□□□ 1.38
TUBB3-214ENST00000557490 ACIN1Q9UKV3 1341 aaKnown RBP23.65■■□□□ 1.38
TUBB3-214ENST00000557490 KDM5AP29375 1690 aaKnown RBP23.65■■□□□ 1.38
TUBB3-214ENST00000557490 SCAF11Q99590 1463 aaKnown RBP23.65■■□□□ 1.38
TUBB3-214ENST00000557490 CHGAP10645 457 aaKnown RBP23.65■■□□□ 1.38
TUBB3-214ENST00000557490 LTKP29376 864 aa23.64■■□□□ 1.37
TUBB3-214ENST00000557490 HDGFP51858 240 aaKnown RBP23.6■■□□□ 1.37
TUBB3-214ENST00000557490 ROBO1Q9Y6N7 1651 aa23.6■■□□□ 1.37
TUBB3-214ENST00000557490 SRCAPQ6ZRS2 3230 aa23.59■■□□□ 1.37
TUBB3-214ENST00000557490 SPHKAPQ2M3C7 1700 aa23.56■■□□□ 1.36
TUBB3-214ENST00000557490 TMEM131LA2VDJ0 1609 aa23.56■■□□□ 1.36
TUBB3-214ENST00000557490 RAB3GAP2Q9H2M9 1393 aa23.56■■□□□ 1.36
TUBB3-214ENST00000557490 UPF1Q92900 1129 aaKnown RBP eCLIP23.56■■□□□ 1.36
TUBB3-214ENST00000557490 MPHOSPH9Q99550 1183 aa23.56■■□□□ 1.36
TUBB3-214ENST00000557490 RIMS2Q9UQ26 1411 aa23.55■■□□□ 1.36
TUBB3-214ENST00000557490 PPP1R15AO75807 674 aaPredicted RBP23.54■■□□□ 1.36
TUBB3-214ENST00000557490 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.54■■□□□ 1.36
TUBB3-214ENST00000557490 TRPM2O94759 1503 aa23.54■■□□□ 1.36
TUBB3-214ENST00000557490 BCANQ96GW7 911 aa23.53■■□□□ 1.36
TUBB3-214ENST00000557490 ZFYVE9O95405 1425 aa23.51■■□□□ 1.35
TUBB3-214ENST00000557490 FOXD1Q16676 465 aa23.51■■□□□ 1.35
TUBB3-214ENST00000557490 TMEM94Q12767 1356 aa23.5■■□□□ 1.35
TUBB3-214ENST00000557490 ZNF326Q5BKZ1 582 aaKnown RBP23.49■■□□□ 1.35
TUBB3-214ENST00000557490 MYO5BQ9ULV0 1848 aa23.48■■□□□ 1.35
TUBB3-214ENST00000557490 HRCP23327 699 aa23.48■■□□□ 1.35
TUBB3-214ENST00000557490 NUTM2DQ5VT03 806 aaPredicted RBP23.47■■□□□ 1.35
TUBB3-214ENST00000557490 PLEKHG1Q9ULL1 1385 aa23.47■■□□□ 1.35
TUBB3-214ENST00000557490 CLTCL1P53675 1640 aa23.47■■□□□ 1.35
TUBB3-214ENST00000557490 PHLPP1O60346 1717 aa23.46■■□□□ 1.35
TUBB3-214ENST00000557490 SLC26A8Q96RN1 970 aa23.46■■□□□ 1.35
TUBB3-214ENST00000557490 JCADQ9P266 1359 aa23.44■■□□□ 1.34
TUBB3-214ENST00000557490 CCDC144AA2RUR9 1427 aa23.42■■□□□ 1.34
TUBB3-214ENST00000557490 LRP6O75581 1613 aa23.4■■□□□ 1.34
TUBB3-214ENST00000557490 KIF1BO60333 1816 aa23.38■■□□□ 1.33
TUBB3-214ENST00000557490 KCNA6P17658 529 aa23.38■■□□□ 1.33
TUBB3-214ENST00000557490 RBM33Q96EV2 1170 aaKnown RBP23.38■■□□□ 1.33
TUBB3-214ENST00000557490 TBX22Q9Y458 520 aa23.38■■□□□ 1.33
TUBB3-214ENST00000557490 COL16A1Q07092 1604 aaPredicted RBP23.37■■□□□ 1.33
TUBB3-214ENST00000557490 RPGRIP1LQ68CZ1 1315 aa23.36■■□□□ 1.33
TUBB3-214ENST00000557490 ZNF772Q68DY9 489 aaPredicted RBP23.35■■□□□ 1.33
TUBB3-214ENST00000557490 PROSER2Q86WR7 435 aaPredicted RBP23.34■■□□□ 1.33
TUBB3-214ENST00000557490 VGFO15240 615 aaPredicted RBP23.33■■□□□ 1.33
TUBB3-214ENST00000557490 NEXMIFQ5QGS0 1516 aa23.33■■□□□ 1.32
TUBB3-214ENST00000557490 ADAMTS13Q76LX8 1427 aa23.33■■□□□ 1.32
TUBB3-214ENST00000557490 NKTRP30414 1462 aaKnown RBP23.32■■□□□ 1.32
TUBB3-214ENST00000557490 NWD1Q149M9 1564 aa23.31■■□□□ 1.32
TUBB3-214ENST00000557490 RGL3Q3MIN7 710 aa23.31■■□□□ 1.32
TUBB3-214ENST00000557490 SLAIN2Q9P270 581 aa23.31■■□□□ 1.32
TUBB3-214ENST00000557490 DIP2AQ14689 1571 aa23.31■■□□□ 1.32
TUBB3-214ENST00000557490 SPATA31A6Q5VVP1 1343 aa23.31■■□□□ 1.32
TUBB3-214ENST00000557490 MSH6P52701 1360 aa23.3■■□□□ 1.32
TUBB3-214ENST00000557490 MEX3CQ5U5Q3 659 aaKnown RBP23.3■■□□□ 1.32
TUBB3-214ENST00000557490 CDK12Q9NYV4 1490 aaPredicted RBP23.29■■□□□ 1.32
TUBB3-214ENST00000557490 PIK3R4Q99570 1358 aa23.28■■□□□ 1.32
TUBB3-214ENST00000557490 SPATA31E1Q6ZUB1 1445 aa23.28■■□□□ 1.32
TUBB3-214ENST00000557490 SETBP1Q9Y6X0 1596 aa23.27■■□□□ 1.32
TUBB3-214ENST00000557490 TRIM26Q12899 539 aaPredicted RBP23.27■■□□□ 1.32
TUBB3-214ENST00000557490 ANKRD30BQ9BXX2 1392 aa23.27■■□□□ 1.31
TUBB3-214ENST00000557490 RXRBP28702 533 aa23.26■■□□□ 1.31
TUBB3-214ENST00000557490 SHPRHQ149N8 1683 aa23.25■■□□□ 1.31
TUBB3-214ENST00000557490 AMOTL2Q9Y2J4 779 aa23.22■■□□□ 1.31
TUBB3-214ENST00000557490 NRXN3Q9Y4C0 1643 aa23.22■■□□□ 1.31
TUBB3-214ENST00000557490 CHD2O14647 1828 aaKnown RBP23.2■■□□□ 1.3
TUBB3-214ENST00000557490 AHDC1Q5TGY3 1603 aaPredicted RBP23.19■■□□□ 1.3
TUBB3-214ENST00000557490 METP08581 1390 aa23.19■■□□□ 1.3
TUBB3-214ENST00000557490 PPLO60437 1756 aa23.19■■□□□ 1.3
TUBB3-214ENST00000557490 ADGRF5Q8IZF2 1346 aa23.18■■□□□ 1.3
TUBB3-214ENST00000557490 PTPRUQ92729 1446 aa23.17■■□□□ 1.3
TUBB3-214ENST00000557490 C14orf37Q86TY3 774 aa23.15■■□□□ 1.3
TUBB3-214ENST00000557490 RGS12O14924 1447 aa23.15■■□□□ 1.3
TUBB3-214ENST00000557490 NCOA3Q9Y6Q9 1424 aa23.14■■□□□ 1.29
TUBB3-214ENST00000557490 AFF2P51816 1311 aa23.11■■□□□ 1.29
TUBB3-214ENST00000557490 IFT172Q9UG01 1749 aa23.11■■□□□ 1.29
TUBB3-214ENST00000557490 XRN1Q8IZH2 1706 aaKnown RBP23.09■■□□□ 1.29
TUBB3-214ENST00000557490 NUTM2BA6NNL0 878 aaPredicted RBP23.09■■□□□ 1.29
TUBB3-214ENST00000557490 NUTM2EB1AL46 878 aaPredicted RBP23.09■■□□□ 1.29
TUBB3-214ENST00000557490 NUTM2AQ8IVF1 878 aaPredicted RBP23.09■■□□□ 1.29
TUBB3-214ENST00000557490 MYOM2P54296 1465 aa23.09■■□□□ 1.29
TUBB3-214ENST00000557490 PIK3C2GO75747 1445 aa23.08■■□□□ 1.29
TUBB3-214ENST00000557490 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.08■■□□□ 1.28
TUBB3-214ENST00000557490 C19orf44Q9H6X5 657 aa23.07■■□□□ 1.28
TUBB3-214ENST00000557490 DCAF11Q8TEB1 546 aa23.06■■□□□ 1.28
TUBB3-214ENST00000557490 STAC3Q96MF2 364 aa23.06■■□□□ 1.28
TUBB3-214ENST00000557490 KDM2AQ9Y2K7 1162 aa23.06■■□□□ 1.28
TUBB3-214ENST00000557490 ATF3P18847 181 aa23.05■■□□□ 1.28
TUBB3-214ENST00000557490 NRXN1Q9ULB1 1477 aa23.05■■□□□ 1.28
TUBB3-214ENST00000557490 C14orf93Q9H972 538 aaKnown RBP23.04■■□□□ 1.28
TUBB3-214ENST00000557490 PTCH1Q13635 1447 aa23.03■■□□□ 1.28
TUBB3-214ENST00000557490 RBM6P78332 1123 aaKnown RBP23.03■■□□□ 1.28
TUBB3-214ENST00000557490 CADPS2Q86UW7 1296 aa23.03■■□□□ 1.28
TUBB3-214ENST00000557490 TMEM132EQ6IEE7 984 aa23.02■■□□□ 1.28
TUBB3-214ENST00000557490 STK26Q9P289 416 aa23.02■■□□□ 1.28
TUBB3-214ENST00000557490 CFAP70Q5T0N1 1121 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms