RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 UNC13BO14795 1591 aa21.93■■□□□ 1.1
SLIRP-210ENST00000557431 ANKRD50Q9ULJ7 1429 aa21.93■■□□□ 1.1
SLIRP-210ENST00000557431 BCANQ96GW7 911 aa21.92■■□□□ 1.1
SLIRP-210ENST00000557431 KCNA6P17658 529 aa21.91■■□□□ 1.1
SLIRP-210ENST00000557431 PROSER2Q86WR7 435 aaPredicted RBP21.91■■□□□ 1.1
SLIRP-210ENST00000557431 RGS17Q9UGC6 210 aaPredicted RBP21.91■■□□□ 1.1
SLIRP-210ENST00000557431 PHLPP1O60346 1717 aa21.9■■□□□ 1.1
SLIRP-210ENST00000557431 ZFYVE9O95405 1425 aa21.89■■□□□ 1.09
SLIRP-210ENST00000557431 NKTRP30414 1462 aaKnown RBP21.88■■□□□ 1.09
SLIRP-210ENST00000557431 FAM135BQ49AJ0 1406 aa21.88■■□□□ 1.09
SLIRP-210ENST00000557431 RPRD2Q5VT52 1461 aaKnown RBP21.87■■□□□ 1.09
SLIRP-210ENST00000557431 RIMS2Q9UQ26 1411 aa21.87■■□□□ 1.09
SLIRP-210ENST00000557431 SETD1AO15047 1707 aaKnown RBP21.86■■□□□ 1.09
SLIRP-210ENST00000557431 NUTM2DQ5VT03 806 aaPredicted RBP21.85■■□□□ 1.09
SLIRP-210ENST00000557431 SLC52A1Q9NWF4 448 aa21.85■■□□□ 1.09
SLIRP-210ENST00000557431 IQGAP3Q86VI3 1631 aa21.84■■□□□ 1.09
SLIRP-210ENST00000557431 CHGAP10645 457 aaKnown RBP21.84■■□□□ 1.09
SLIRP-210ENST00000557431 PLEKHG1Q9ULL1 1385 aa21.82■■□□□ 1.08
SLIRP-210ENST00000557431 PPP1R15AO75807 674 aaPredicted RBP21.81■■□□□ 1.08
SLIRP-210ENST00000557431 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.8■■□□□ 1.08
SLIRP-210ENST00000557431 MSH6P52701 1360 aa21.8■■□□□ 1.08
SLIRP-210ENST00000557431 POTEAQ6S8J7 498 aa21.78■■□□□ 1.08
SLIRP-210ENST00000557431 PPARGC1BQ86YN6 1023 aaKnown RBP21.78■■□□□ 1.08
SLIRP-210ENST00000557431 COL16A1Q07092 1604 aaPredicted RBP21.77■■□□□ 1.08
SLIRP-210ENST00000557431 ITGAEP38570 1179 aa21.77■■□□□ 1.08
SLIRP-210ENST00000557431 SPHKAPQ2M3C7 1700 aa21.77■■□□□ 1.08
SLIRP-210ENST00000557431 ADAMTS13Q76LX8 1427 aa21.76■■□□□ 1.07
SLIRP-210ENST00000557431 SLAIN2Q9P270 581 aa21.73■■□□□ 1.07
SLIRP-210ENST00000557431 NRXN3Q9Y4C0 1643 aa21.73■■□□□ 1.07
SLIRP-210ENST00000557431 DIP2AQ14689 1571 aa21.72■■□□□ 1.07
SLIRP-210ENST00000557431 C14orf37Q86TY3 774 aa21.7■■□□□ 1.06
SLIRP-210ENST00000557431 NUP155O75694 1391 aa21.7■■□□□ 1.06
SLIRP-210ENST00000557431 TBX22Q9Y458 520 aa21.69■■□□□ 1.06
SLIRP-210ENST00000557431 ROCK1Q13464 1354 aa21.69■■□□□ 1.06
SLIRP-210ENST00000557431 PTPRUQ92729 1446 aa21.69■■□□□ 1.06
SLIRP-210ENST00000557431 TRPM2O94759 1503 aa21.69■■□□□ 1.06
SLIRP-210ENST00000557431 LRP6O75581 1613 aa21.68■■□□□ 1.06
SLIRP-210ENST00000557431 XRN1Q8IZH2 1706 aaKnown RBP21.67■■□□□ 1.06
SLIRP-210ENST00000557431 HDGFP51858 240 aaKnown RBP21.67■■□□□ 1.06
SLIRP-210ENST00000557431 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.67■■□□□ 1.06
SLIRP-210ENST00000557431 SHPRHQ149N8 1683 aa21.66■■□□□ 1.06
SLIRP-210ENST00000557431 JCADQ9P266 1359 aa21.66■■□□□ 1.06
SLIRP-210ENST00000557431 AHDC1Q5TGY3 1603 aaPredicted RBP21.65■■□□□ 1.06
SLIRP-210ENST00000557431 CLTCL1P53675 1640 aa21.64■■□□□ 1.05
SLIRP-210ENST00000557431 KIF1BO60333 1816 aa21.64■■□□□ 1.05
SLIRP-210ENST00000557431 NALCNQ8IZF0 1738 aa21.61■■□□□ 1.05
SLIRP-210ENST00000557431 AMOTL2Q9Y2J4 779 aa21.61■■□□□ 1.05
SLIRP-210ENST00000557431 NCOA3Q9Y6Q9 1424 aa21.6■■□□□ 1.05
SLIRP-210ENST00000557431 SETBP1Q9Y6X0 1596 aa21.6■■□□□ 1.05
SLIRP-210ENST00000557431 PIK3R4Q99570 1358 aa21.59■■□□□ 1.05
SLIRP-210ENST00000557431 NHSL1Q5SYE7 1610 aa21.58■■□□□ 1.05
SLIRP-210ENST00000557431 ATF3P18847 181 aa21.58■■□□□ 1.05
SLIRP-210ENST00000557431 NEXMIFQ5QGS0 1516 aa21.57■■□□□ 1.04
SLIRP-210ENST00000557431 ZNF326Q5BKZ1 582 aaKnown RBP21.57■■□□□ 1.04
SLIRP-210ENST00000557431 C19orf44Q9H6X5 657 aa21.57■■□□□ 1.04
SLIRP-210ENST00000557431 CADPS2Q86UW7 1296 aa21.56■■□□□ 1.04
SLIRP-210ENST00000557431 MEX3CQ5U5Q3 659 aaKnown RBP21.55■■□□□ 1.04
SLIRP-210ENST00000557431 BRINP3Q76B58 766 aa21.55■■□□□ 1.04
SLIRP-210ENST00000557431 ASXL1Q8IXJ9 1541 aa21.55■■□□□ 1.04
SLIRP-210ENST00000557431 METP08581 1390 aa21.54■■□□□ 1.04
SLIRP-210ENST00000557431 NUTM2BA6NNL0 878 aaPredicted RBP21.52■■□□□ 1.04
SLIRP-210ENST00000557431 NUTM2EB1AL46 878 aaPredicted RBP21.52■■□□□ 1.04
SLIRP-210ENST00000557431 NUTM2AQ8IVF1 878 aaPredicted RBP21.52■■□□□ 1.04
SLIRP-210ENST00000557431 MST1RQ04912 1400 aa21.52■■□□□ 1.04
SLIRP-210ENST00000557431 TRIM52Q96A61 297 aa21.51■■□□□ 1.03
SLIRP-210ENST00000557431 SPATA31A6Q5VVP1 1343 aa21.51■■□□□ 1.03
SLIRP-210ENST00000557431 DDX17Q92841 729 aaKnown RBP21.5■■□□□ 1.03
SLIRP-210ENST00000557431 DCCP43146 1447 aa21.47■■□□□ 1.03
SLIRP-210ENST00000557431 PPLO60437 1756 aa21.47■■□□□ 1.03
SLIRP-210ENST00000557431 NAIPQ13075 1403 aa21.46■■□□□ 1.03
SLIRP-210ENST00000557431 ADGRL3Q9HAR2 1447 aa21.46■■□□□ 1.03
SLIRP-210ENST00000557431 RRBP1Q9P2E9 1410 aaKnown RBP21.44■■□□□ 1.02
SLIRP-210ENST00000557431 ZNF772Q68DY9 489 aaPredicted RBP21.42■■□□□ 1.02
SLIRP-210ENST00000557431 SETD5Q9C0A6 1442 aa21.41■■□□□ 1.02
SLIRP-210ENST00000557431 AFF2P51816 1311 aa21.4■■□□□ 1.02
SLIRP-210ENST00000557431 UPF1Q92900 1129 aaKnown RBP eCLIP21.38■■□□□ 1.01
SLIRP-210ENST00000557431 PNPLA6Q8IY17 1366 aa21.37■■□□□ 1.01
SLIRP-210ENST00000557431 ROBO2Q9HCK4 1378 aa21.36■■□□□ 1.01
SLIRP-210ENST00000557431 RXRBP28702 533 aa21.36■■□□□ 1.01
SLIRP-210ENST00000557431 C1orf167Q5SNV9 1468 aa21.36■■□□□ 1.01
SLIRP-210ENST00000557431 LAMC1P11047 1609 aa21.36■■□□□ 1.01
SLIRP-210ENST00000557431 C8orf37Q96NL8 207 aa21.35■■□□□ 1.01
SLIRP-210ENST00000557431 IFT172Q9UG01 1749 aa21.33■■□□□ 1.01
SLIRP-210ENST00000557431 PTCH1Q13635 1447 aa21.33■■□□□ 1.01
SLIRP-210ENST00000557431 FOXD1Q16676 465 aa21.33■■□□□ 1.01
SLIRP-210ENST00000557431 LRRC59Q96AG4 307 aaKnown RBP21.33■■□□□ 1.01
SLIRP-210ENST00000557431 ORAI2Q96SN7 254 aa21.33■■□□□ 1.01
SLIRP-210ENST00000557431 RGS12O14924 1447 aa21.32■■□□□ 1
SLIRP-210ENST00000557431 ADAMTS2O95450 1211 aa21.31■■□□□ 1
SLIRP-210ENST00000557431 HFM1A2PYH4 1435 aa21.3■■□□□ 1
SLIRP-210ENST00000557431 MARF1Q9Y4F3 1742 aaKnown RBP21.3■■□□□ 1
SLIRP-210ENST00000557431 SLC4A1APQ9BWU0 796 aaKnown RBP21.3■■□□□ 1
SLIRP-210ENST00000557431 CDK12Q9NYV4 1490 aaPredicted RBP21.28■■□□□ 1
SLIRP-210ENST00000557431 RGPD8O14715 1765 aaPredicted RBP21.28■■□□□ 1
SLIRP-210ENST00000557431 VGFO15240 615 aaPredicted RBP21.27■■□□□ 1
SLIRP-210ENST00000557431 QTRT2Q9H974 415 aaKnown RBP21.26■□□□□ 0.99
SLIRP-210ENST00000557431 COL22A1Q8NFW1 1626 aaPredicted RBP21.26■□□□□ 0.99
SLIRP-210ENST00000557431 CDC42BPGQ6DT37 1551 aa21.24■□□□□ 0.99
SLIRP-210ENST00000557431 KNDC1Q76NI1 1749 aa21.24■□□□□ 0.99
SLIRP-210ENST00000557431 NGLY1Q96IV0 654 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms