RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 HSP90AA1P07900 732 aaKnown RBP13.55□□□□□ -0.24
SUPT16H-207ENST00000557394 KIF14Q15058 1648 aa13.55□□□□□ -0.24
SUPT16H-207ENST00000557394 TEX2Q8IWB9 1127 aa13.54□□□□□ -0.24
SUPT16H-207ENST00000557394 IPO4Q8TEX9 1081 aaKnown RBP13.54□□□□□ -0.24
SUPT16H-207ENST00000557394 PLEKHD1A6NEE1 506 aa13.53□□□□□ -0.24
SUPT16H-207ENST00000557394 SECISBP2LQ93073 1101 aaKnown RBP13.53□□□□□ -0.24
SUPT16H-207ENST00000557394 PNNQ9H307 717 aaKnown RBP13.53□□□□□ -0.24
SUPT16H-207ENST00000557394 CHIC2Q9UKJ5 165 aa13.53□□□□□ -0.24
SUPT16H-207ENST00000557394 E9PCH4 1651 aa13.53□□□□□ -0.24
SUPT16H-207ENST00000557394 PLIN1O60240 522 aa13.53□□□□□ -0.24
SUPT16H-207ENST00000557394 CNGB1Q14028 1251 aaPredicted RBP13.52□□□□□ -0.24
SUPT16H-207ENST00000557394 ROCK1Q13464 1354 aa13.52□□□□□ -0.25
SUPT16H-207ENST00000557394 MAPK8IP2Q13387 824 aaPredicted RBP13.51□□□□□ -0.25
SUPT16H-207ENST00000557394 CDCA7LQ96GN5 454 aa13.51□□□□□ -0.25
SUPT16H-207ENST00000557394 FSD2A1L4K1 749 aa13.51□□□□□ -0.25
SUPT16H-207ENST00000557394 BLMP54132 1417 aaPredicted RBP13.5□□□□□ -0.25
SUPT16H-207ENST00000557394 PLEKHH2Q8IVE3 1493 aa13.5□□□□□ -0.25
SUPT16H-207ENST00000557394 VIRMAQ69YN4 1812 aaKnown RBP13.49□□□□□ -0.25
SUPT16H-207ENST00000557394 USP19O94966 1318 aa13.49□□□□□ -0.25
SUPT16H-207ENST00000557394 PARD3Q8TEW0 1356 aa13.49□□□□□ -0.25
SUPT16H-207ENST00000557394 CYB5RLQ6IPT4 315 aa13.48□□□□□ -0.25
SUPT16H-207ENST00000557394 NLRP13Q86W25 1043 aa13.48□□□□□ -0.25
SUPT16H-207ENST00000557394 CLSTN1O94985 981 aa13.48□□□□□ -0.25
SUPT16H-207ENST00000557394 NPM1P06748 294 aaKnown RBP eCLIP13.48□□□□□ -0.25
SUPT16H-207ENST00000557394 XRCC6P12956 609 aaKnown RBP eCLIP13.48□□□□□ -0.25
SUPT16H-207ENST00000557394 ITSN2Q9NZM3 1697 aa13.48□□□□□ -0.25
SUPT16H-207ENST00000557394 UHRF1BP1Q6BDS2 1440 aa13.48□□□□□ -0.25
SUPT16H-207ENST00000557394 RALGAPBQ86X10 1494 aa13.48□□□□□ -0.25
SUPT16H-207ENST00000557394 CHRM1P11229 460 aaPredicted RBP13.47□□□□□ -0.25
SUPT16H-207ENST00000557394 C20orf194Q5TEA3 1177 aa13.47□□□□□ -0.25
SUPT16H-207ENST00000557394 ABCC10Q5T3U5 1492 aa13.47□□□□□ -0.25
SUPT16H-207ENST00000557394 WDR7Q9Y4E6 1490 aa13.47□□□□□ -0.25
SUPT16H-207ENST00000557394 CENPJQ9HC77 1338 aaPredicted RBP13.47□□□□□ -0.25
SUPT16H-207ENST00000557394 ANTXR1Q9H6X2 564 aa13.46□□□□□ -0.26
SUPT16H-207ENST00000557394 BBXQ8WY36 941 aaPredicted RBP13.45□□□□□ -0.26
SUPT16H-207ENST00000557394 ASXL2Q76L83 1435 aa13.45□□□□□ -0.26
SUPT16H-207ENST00000557394 CDC42BPAQ5VT25 1732 aa13.45□□□□□ -0.26
SUPT16H-207ENST00000557394 PZPP20742 1482 aa13.44□□□□□ -0.26
SUPT16H-207ENST00000557394 WWC1Q8IX03 1113 aa13.44□□□□□ -0.26
SUPT16H-207ENST00000557394 GOLGA6L3A6NEY3 463 aa13.44□□□□□ -0.26
SUPT16H-207ENST00000557394 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.43□□□□□ -0.26
SUPT16H-207ENST00000557394 BECN1Q14457 450 aa13.43□□□□□ -0.26
SUPT16H-207ENST00000557394 TTC37Q6PGP7 1564 aa13.43□□□□□ -0.26
SUPT16H-207ENST00000557394 MYO5CQ9NQX4 1742 aa13.42□□□□□ -0.26
SUPT16H-207ENST00000557394 GPATCH8Q9UKJ3 1502 aaKnown RBP13.42□□□□□ -0.26
SUPT16H-207ENST00000557394 DAPK1P53355 1430 aa13.42□□□□□ -0.26
SUPT16H-207ENST00000557394 PREX2Q70Z35 1606 aa13.42□□□□□ -0.26
SUPT16H-207ENST00000557394 NLRP1Q9C000 1473 aa13.42□□□□□ -0.26
SUPT16H-207ENST00000557394 PSMD1Q99460 953 aa13.41□□□□□ -0.26
SUPT16H-207ENST00000557394 ABCA9Q8IUA7 1624 aa13.41□□□□□ -0.26
SUPT16H-207ENST00000557394 DNMT1P26358 1616 aaKnown RBP13.4□□□□□ -0.26
SUPT16H-207ENST00000557394 RNF216Q9NWF9 866 aaPredicted RBP13.4□□□□□ -0.26
SUPT16H-207ENST00000557394 TPM2P07951 284 aa13.4□□□□□ -0.26
SUPT16H-207ENST00000557394 PANK2Q9BZ23 570 aa13.4□□□□□ -0.26
SUPT16H-207ENST00000557394 KCNG1Q9UIX4 513 aa13.4□□□□□ -0.26
SUPT16H-207ENST00000557394 KIAA1107Q9UPP5 1409 aa13.4□□□□□ -0.27
SUPT16H-207ENST00000557394 CDC42BPBQ9Y5S2 1711 aa13.39□□□□□ -0.27
SUPT16H-207ENST00000557394 FTSJ3Q8IY81 847 aaKnown RBP13.39□□□□□ -0.27
SUPT16H-207ENST00000557394 PDCL3Q9H2J4 239 aa13.39□□□□□ -0.27
SUPT16H-207ENST00000557394 CERS3Q8IU89 383 aa13.39□□□□□ -0.27
SUPT16H-207ENST00000557394 ABCC5O15440 1437 aa13.39□□□□□ -0.27
SUPT16H-207ENST00000557394 RGS3P49796 1198 aa13.38□□□□□ -0.27
SUPT16H-207ENST00000557394 ARID3AQ99856 593 aa13.38□□□□□ -0.27
SUPT16H-207ENST00000557394 ARHGEF12Q9NZN5 1544 aa13.38□□□□□ -0.27
SUPT16H-207ENST00000557394 MRE11P49959 708 aa13.38□□□□□ -0.27
SUPT16H-207ENST00000557394 CALD1Q05682 793 aaKnown RBP13.38□□□□□ -0.27
SUPT16H-207ENST00000557394 DNAJC5Q9H3Z4 198 aa13.38□□□□□ -0.27
SUPT16H-207ENST00000557394 EIF3AQ14152 1382 aaKnown RBP13.37□□□□□ -0.27
SUPT16H-207ENST00000557394 ESPNB1AK53 854 aa13.37□□□□□ -0.27
SUPT16H-207ENST00000557394 ARAP3Q8WWN8 1544 aa13.36□□□□□ -0.27
SUPT16H-207ENST00000557394 PER1O15534 1290 aaPredicted RBP13.36□□□□□ -0.27
SUPT16H-207ENST00000557394 SLKQ9H2G2 1235 aaPredicted RBP13.36□□□□□ -0.27
SUPT16H-207ENST00000557394 DUSP27Q5VZP5 1158 aa13.36□□□□□ -0.27
SUPT16H-207ENST00000557394 CFDP1Q9UEE9 299 aaPredicted RBP13.36□□□□□ -0.27
SUPT16H-207ENST00000557394 ISY1Q9ULR0 285 aaKnown RBP13.36□□□□□ -0.27
SUPT16H-207ENST00000557394 MCM4P33991 863 aa13.35□□□□□ -0.27
SUPT16H-207ENST00000557394 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.35□□□□□ -0.27
SUPT16H-207ENST00000557394 CARD11Q9BXL7 1154 aa13.35□□□□□ -0.27
SUPT16H-207ENST00000557394 CAMSAP2Q08AD1 1489 aa13.35□□□□□ -0.27
SUPT16H-207ENST00000557394 ST20-MTHFSA0A0A6YYL1 179 aa13.35□□□□□ -0.27
SUPT16H-207ENST00000557394 ZNF526Q8TF50 670 aaPredicted RBP13.35□□□□□ -0.27
SUPT16H-207ENST00000557394 NECTIN2Q92692 538 aa13.35□□□□□ -0.27
SUPT16H-207ENST00000557394 ZNF692Q9BU19 519 aaPredicted RBP13.35□□□□□ -0.27
SUPT16H-207ENST00000557394 CWC22Q9HCG8 908 aaKnown RBP13.35□□□□□ -0.27
SUPT16H-207ENST00000557394 PLCH2O75038 1416 aa13.35□□□□□ -0.27
SUPT16H-207ENST00000557394 GTF2E1P29083 439 aaPredicted RBP13.34□□□□□ -0.27
SUPT16H-207ENST00000557394 PRDM4Q9UKN5 801 aa13.34□□□□□ -0.27
SUPT16H-207ENST00000557394 GLI2P10070 1586 aa13.34□□□□□ -0.27
SUPT16H-207ENST00000557394 ERBB4Q15303 1308 aa13.34□□□□□ -0.27
SUPT16H-207ENST00000557394 ARHGAP5Q13017 1502 aa13.34□□□□□ -0.27
SUPT16H-207ENST00000557394 SEC24BO95487 1268 aa13.34□□□□□ -0.27
SUPT16H-207ENST00000557394 PLCD4Q9BRC7 762 aa13.33□□□□□ -0.28
SUPT16H-207ENST00000557394 ZNF521Q96K83 1311 aa13.33□□□□□ -0.28
SUPT16H-207ENST00000557394 PRDM16Q9HAZ2 1276 aa13.33□□□□□ -0.28
SUPT16H-207ENST00000557394 MAPK8IP3Q9UPT6 1336 aa13.32□□□□□ -0.28
SUPT16H-207ENST00000557394 SAMD9LQ8IVG5 1584 aa13.32□□□□□ -0.28
SUPT16H-207ENST00000557394 ZMYM3Q14202 1370 aa13.32□□□□□ -0.28
SUPT16H-207ENST00000557394 MYH16Q9H6N6 1097 aa13.31□□□□□ -0.28
SUPT16H-207ENST00000557394 DIP2BQ9P265 1576 aa13.31□□□□□ -0.28
SUPT16H-207ENST00000557394 TBC1D2Q9BYX2 928 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms