RNA–Protein interactions for RNA: ENST00000557206.1

HIF1A-210, Transcript of hypoxia inducible factor 1 subunit alpha, human

TSL 3

Gene HIF1A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIF1A-210	ENST00000557206	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.99	□□□□□ -0.65
HIF1A-210	ENST00000557206	LAPTM4B	Q86VI4	370 aa		10.99	□□□□□ -0.65
HIF1A-210	ENST00000557206	GOLGA8CP	A6NN73	597 aa		10.98	□□□□□ -0.65
HIF1A-210	ENST00000557206	SLC4A3	P48751	1232 aa		10.98	□□□□□ -0.65
HIF1A-210	ENST00000557206	DAXX	Q9UER7	740 aa	Predicted RBP	10.98	□□□□□ -0.65
HIF1A-210	ENST00000557206	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.97	□□□□□ -0.65
HIF1A-210	ENST00000557206	TMEM134	Q9H6X4	195 aa		10.96	□□□□□ -0.65
HIF1A-210	ENST00000557206	SSTR3	P32745	418 aa	Predicted RBP	10.95	□□□□□ -0.66
HIF1A-210	ENST00000557206	SULF1	Q8IWU6	871 aa		10.95	□□□□□ -0.66
HIF1A-210	ENST00000557206	REPIN1	Q9BWE0	567 aa	Known RBP	10.95	□□□□□ -0.66
HIF1A-210	ENST00000557206	HR	O43593	1189 aa		10.94	□□□□□ -0.66
HIF1A-210	ENST00000557206	RSPH4A	Q5TD94	716 aa		10.94	□□□□□ -0.66
HIF1A-210	ENST00000557206	ZFR	Q96KR1	1074 aa	Known RBP	10.93	□□□□□ -0.66
HIF1A-210	ENST00000557206	TMUB1	Q9BVT8	246 aa		10.93	□□□□□ -0.66
HIF1A-210	ENST00000557206	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.93	□□□□□ -0.66
HIF1A-210	ENST00000557206	DDX11L8	A8MPP1	907 aa		10.92	□□□□□ -0.66
HIF1A-210	ENST00000557206	SWT1	Q5T5J6	900 aa	Known RBP	10.92	□□□□□ -0.66
HIF1A-210	ENST00000557206	IL27	Q8NEV9	243 aa		10.92	□□□□□ -0.66
HIF1A-210	ENST00000557206	DDRGK1	Q96HY6	314 aa		10.92	□□□□□ -0.66
HIF1A-210	ENST00000557206	RNF40	O75150	1001 aa		10.91	□□□□□ -0.66
HIF1A-210	ENST00000557206	SAMD7	Q7Z3H4	446 aa		10.91	□□□□□ -0.66
HIF1A-210	ENST00000557206	MS4A1	P11836	297 aa		10.9	□□□□□ -0.66
HIF1A-210	ENST00000557206	TMEM132A	Q24JP5	1023 aa		10.9	□□□□□ -0.66
HIF1A-210	ENST00000557206	SLF2	Q8IX21	1173 aa		10.9	□□□□□ -0.66
HIF1A-210	ENST00000557206	RDH13	Q8NBN7	331 aa		10.9	□□□□□ -0.66
HIF1A-210	ENST00000557206	ANKK1	Q8NFD2	765 aa		10.89	□□□□□ -0.67
HIF1A-210	ENST00000557206	LRCH3	Q96II8	777 aa		10.89	□□□□□ -0.67
HIF1A-210	ENST00000557206	FAM117A	Q9C073	453 aa		10.89	□□□□□ -0.67
HIF1A-210	ENST00000557206	BEGAIN	Q9BUH8	593 aa		10.88	□□□□□ -0.67
HIF1A-210	ENST00000557206	WNT2B	Q93097	391 aa		10.87	□□□□□ -0.67
HIF1A-210	ENST00000557206	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10.87	□□□□□ -0.67
HIF1A-210	ENST00000557206	NECTIN2	Q92692	538 aa		10.85	□□□□□ -0.67
HIF1A-210	ENST00000557206	CD46	P15529	392 aa		10.83	□□□□□ -0.68
HIF1A-210	ENST00000557206	DIXDC1	Q155Q3	683 aa		10.82	□□□□□ -0.68
HIF1A-210	ENST00000557206	NUTM1	Q86Y26	1132 aa		10.82	□□□□□ -0.68
HIF1A-210	ENST00000557206	RSPH6A	Q9H0K4	717 aa		10.82	□□□□□ -0.68
HIF1A-210	ENST00000557206	SOWAHB	A6NEL2	793 aa		10.81	□□□□□ -0.68
HIF1A-210	ENST00000557206	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.81	□□□□□ -0.68
HIF1A-210	ENST00000557206	PLEKHG3	A1L390	1219 aa		10.8	□□□□□ -0.68
HIF1A-210	ENST00000557206	PPP4C	P60510	307 aa		10.8	□□□□□ -0.68
HIF1A-210	ENST00000557206	SLC10A3	P09131	477 aa		10.79	□□□□□ -0.68
HIF1A-210	ENST00000557206	BCAM	P50895	628 aa		10.79	□□□□□ -0.68
HIF1A-210	ENST00000557206	KCTD12	Q96CX2	325 aa	Known RBP	10.79	□□□□□ -0.68
HIF1A-210	ENST00000557206	HPS5	Q9UPZ3	1129 aa		10.79	□□□□□ -0.68
HIF1A-210	ENST00000557206	GCGR	P47871	477 aa		10.78	□□□□□ -0.68
HIF1A-210	ENST00000557206	KMT5B	Q4FZB7	885 aa		10.78	□□□□□ -0.68
HIF1A-210	ENST00000557206	HCST	Q9UBK5	93 aa		10.78	□□□□□ -0.68
HIF1A-210	ENST00000557206	TSR3	Q9UJK0	312 aa	Known RBP	10.78	□□□□□ -0.68
HIF1A-210	ENST00000557206	CFH	P08603	1231 aa		10.77	□□□□□ -0.69
HIF1A-210	ENST00000557206	KDM4A	O75164	1064 aa		10.76	□□□□□ -0.69
HIF1A-210	ENST00000557206	PRR14	Q9BWN1	585 aa		10.76	□□□□□ -0.69
HIF1A-210	ENST00000557206	TBC1D2	Q9BYX2	928 aa		10.76	□□□□□ -0.69
HIF1A-210	ENST00000557206	SPIRE2	Q8WWL2	714 aa		10.75	□□□□□ -0.69
HIF1A-210	ENST00000557206	GRIPAP1	Q4V328	841 aa		10.74	□□□□□ -0.69
HIF1A-210	ENST00000557206	THSD4	Q6ZMP0	1018 aa		10.74	□□□□□ -0.69
HIF1A-210	ENST00000557206	USP46	P62068	366 aa		10.73	□□□□□ -0.69
HIF1A-210	ENST00000557206	SH3D19	Q5HYK7	790 aa		10.73	□□□□□ -0.69
HIF1A-210	ENST00000557206	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.73	□□□□□ -0.69
HIF1A-210	ENST00000557206	GOPC	Q9HD26	462 aa		10.73	□□□□□ -0.69
HIF1A-210	ENST00000557206	SKIV2L	Q15477	1246 aa	Known RBP	10.72	□□□□□ -0.69
HIF1A-210	ENST00000557206	POLR3E	Q9NVU0	708 aa		10.72	□□□□□ -0.69
HIF1A-210	ENST00000557206	PTPN5	P54829	565 aa		10.71	□□□□□ -0.69
HIF1A-210	ENST00000557206	MYSM1	Q5VVJ2	828 aa		10.71	□□□□□ -0.69
HIF1A-210	ENST00000557206	RIC3	Q7Z5B4	369 aa		10.7	□□□□□ -0.7
HIF1A-210	ENST00000557206	WBP1L	Q9NX94	342 aa		10.7	□□□□□ -0.7
HIF1A-210	ENST00000557206	PLA2G2E	Q9NZK7	142 aa		10.7	□□□□□ -0.7
HIF1A-210	ENST00000557206	ATP6V1A	P38606	617 aa		10.69	□□□□□ -0.7
HIF1A-210	ENST00000557206	CLK2	P49760	499 aa	Known RBP	10.69	□□□□□ -0.7
HIF1A-210	ENST00000557206	FUT2	Q10981	343 aa		10.69	□□□□□ -0.7
HIF1A-210	ENST00000557206	ACTN4	O43707	911 aa	Known RBP	10.68	□□□□□ -0.7
HIF1A-210	ENST00000557206	NYAP1	Q6ZVC0	841 aa		10.68	□□□□□ -0.7
HIF1A-210	ENST00000557206	MOXD2P	A6NHM9	499 aa		10.67	□□□□□ -0.7
HIF1A-210	ENST00000557206	HOXA2	O43364	376 aa		10.67	□□□□□ -0.7
HIF1A-210	ENST00000557206	NDUFV2	P19404	249 aa		10.66	□□□□□ -0.7
HIF1A-210	ENST00000557206	APLP1	P51693	650 aa		10.66	□□□□□ -0.7
HIF1A-210	ENST00000557206	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.65	□□□□□ -0.7
HIF1A-210	ENST00000557206	PCDHB3	Q9Y5E6	796 aa		10.65	□□□□□ -0.7
HIF1A-210	ENST00000557206	SPTLC1	O15269	473 aa		10.64	□□□□□ -0.71
HIF1A-210	ENST00000557206	FDX1	P10109	184 aa		10.64	□□□□□ -0.71
HIF1A-210	ENST00000557206	GJA5	P36382	358 aa		10.64	□□□□□ -0.71
HIF1A-210	ENST00000557206	CSPP1	Q1MSJ5	1256 aa		10.64	□□□□□ -0.71
HIF1A-210	ENST00000557206	PUS10	Q3MIT2	529 aa	Known RBP	10.64	□□□□□ -0.71
HIF1A-210	ENST00000557206	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.64	□□□□□ -0.71
HIF1A-210	ENST00000557206	LIMD1	Q9UGP4	676 aa		10.63	□□□□□ -0.71
HIF1A-210	ENST00000557206	GTF3C3	Q9Y5Q9	886 aa		10.63	□□□□□ -0.71
HIF1A-210	ENST00000557206	NUTM2B	A6NNL0	878 aa	Predicted RBP	10.61	□□□□□ -0.71
HIF1A-210	ENST00000557206	NUTM2E	B1AL46	878 aa	Predicted RBP	10.61	□□□□□ -0.71
HIF1A-210	ENST00000557206	GUCA2A	Q02747	115 aa		10.61	□□□□□ -0.71
HIF1A-210	ENST00000557206	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.61	□□□□□ -0.71
HIF1A-210	ENST00000557206	NUTM2A	Q8IVF1	878 aa	Predicted RBP	10.61	□□□□□ -0.71
HIF1A-210	ENST00000557206	HLA-C	Q95604	372 aa		10.61	□□□□□ -0.71
HIF1A-210	ENST00000557206	NR1I2	O75469	434 aa		10.6	□□□□□ -0.71
HIF1A-210	ENST00000557206	TUSC1	Q2TAM9	212 aa		10.6	□□□□□ -0.71
HIF1A-210	ENST00000557206		Q3C1V9	767 aa		10.6	□□□□□ -0.71
HIF1A-210	ENST00000557206	MORN1	Q5T089	497 aa		10.6	□□□□□ -0.71
HIF1A-210	ENST00000557206	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.59	□□□□□ -0.71
HIF1A-210	ENST00000557206	ZBTB3	Q9H5J0	574 aa		10.59	□□□□□ -0.71
HIF1A-210	ENST00000557206	C6orf229	H3BNL8	230 aa		10.58	□□□□□ -0.72
HIF1A-210	ENST00000557206	SLC27A5	Q9Y2P5	690 aa		10.58	□□□□□ -0.72
HIF1A-210	ENST00000557206	PCDHB15	Q9Y5E8	787 aa		10.58	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms