RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 VPS37DQ86XT2 251 aa14.73□□□□□ -0.05
NEK9-210ENST00000557026 GAS2L2Q8NHY3 880 aa14.73□□□□□ -0.05
NEK9-210ENST00000557026 TOMM22Q9NS69 142 aa14.73□□□□□ -0.05
NEK9-210ENST00000557026 PPP6R1Q9UPN7 881 aa14.73□□□□□ -0.05
NEK9-210ENST00000557026 ANKLE2Q86XL3 938 aa14.72□□□□□ -0.05
NEK9-210ENST00000557026 CWC22Q9HCG8 908 aaKnown RBP14.72□□□□□ -0.05
NEK9-210ENST00000557026 NOP58Q9Y2X3 529 aaKnown RBP14.72□□□□□ -0.05
NEK9-210ENST00000557026 ANKRD50Q9ULJ7 1429 aa14.72□□□□□ -0.05
NEK9-210ENST00000557026 MSNP26038 577 aaKnown RBP14.72□□□□□ -0.05
NEK9-210ENST00000557026 PROSER2Q86WR7 435 aaPredicted RBP14.72□□□□□ -0.05
NEK9-210ENST00000557026 PLEKHO1Q53GL0 409 aaPredicted RBP14.71□□□□□ -0.05
NEK9-210ENST00000557026 MINK1Q8N4C8 1332 aaPredicted RBP14.71□□□□□ -0.05
NEK9-210ENST00000557026 TRDNQ13061 729 aa14.71□□□□□ -0.06
NEK9-210ENST00000557026 DDX19BQ9UMR2 479 aa14.71□□□□□ -0.06
NEK9-210ENST00000557026 ZKSCAN1P17029 563 aaPredicted RBP14.7□□□□□ -0.06
NEK9-210ENST00000557026 HOOK1Q9UJC3 728 aaKnown RBP14.7□□□□□ -0.06
NEK9-210ENST00000557026 FGD6Q6ZV73 1430 aa14.7□□□□□ -0.06
NEK9-210ENST00000557026 TRIM29Q14134 588 aa14.7□□□□□ -0.06
NEK9-210ENST00000557026 ERC2O15083 957 aa14.69□□□□□ -0.06
NEK9-210ENST00000557026 REC8O95072 547 aa14.69□□□□□ -0.06
NEK9-210ENST00000557026 G3BP1Q13283 466 aaKnown RBP eCLIP14.69□□□□□ -0.062e-6■□□□□ 8.1
NEK9-210ENST00000557026 SF3A1Q15459 793 aaKnown RBP14.69□□□□□ -0.06
NEK9-210ENST00000557026 TSR1Q2NL82 804 aaKnown RBP14.69□□□□□ -0.06
NEK9-210ENST00000557026 TAOK2Q9UL54 1235 aa14.69□□□□□ -0.06
NEK9-210ENST00000557026 TPM3P06753 285 aa14.69□□□□□ -0.06
NEK9-210ENST00000557026 USP47Q96K76 1375 aa14.69□□□□□ -0.06
NEK9-210ENST00000557026 PANK3Q9H999 370 aa14.69□□□□□ -0.06
NEK9-210ENST00000557026 TPM1P09493 284 aa14.68□□□□□ -0.06
NEK9-210ENST00000557026 TXNDC2Q86VQ3 553 aa14.68□□□□□ -0.06
NEK9-210ENST00000557026 DIAPH3Q9NSV4 1193 aa14.68□□□□□ -0.06
NEK9-210ENST00000557026 DAPK1P53355 1430 aa14.68□□□□□ -0.06
NEK9-210ENST00000557026 ERICH2A1L162 156 aa14.67□□□□□ -0.06
NEK9-210ENST00000557026 NOC3LQ8WTT2 800 aaKnown RBP14.67□□□□□ -0.06
NEK9-210ENST00000557026 PHF23Q9BUL5 403 aaPredicted RBP14.67□□□□□ -0.06
NEK9-210ENST00000557026 APBB1O00213 710 aa14.67□□□□□ -0.06
NEK9-210ENST00000557026 ST20-MTHFSA0A0A6YYL1 179 aa14.67□□□□□ -0.06
NEK9-210ENST00000557026 VPS53Q5VIR6 699 aa14.66□□□□□ -0.06
NEK9-210ENST00000557026 ANKRD20A12PQ8NF67 263 aa14.66□□□□□ -0.06
NEK9-210ENST00000557026 RUNDC1Q96C34 613 aa14.66□□□□□ -0.06
NEK9-210ENST00000557026 IFIT2P09913 472 aaKnown RBP14.66□□□□□ -0.06
NEK9-210ENST00000557026 FAM184AQ8NB25 1140 aa14.66□□□□□ -0.06
NEK9-210ENST00000557026 CCDC7Q96M83 1385 aa14.65□□□□□ -0.06
NEK9-210ENST00000557026 CENPQQ7L2Z9 268 aaPredicted RBP14.65□□□□□ -0.06
NEK9-210ENST00000557026 AQRO60306 1485 aaKnown RBP eCLIP14.65□□□□□ -0.066e-8■■■■■ 46.1
NEK9-210ENST00000557026 NUTM2DQ5VT03 806 aaPredicted RBP14.65□□□□□ -0.06
NEK9-210ENST00000557026 ANKRD30BQ9BXX2 1392 aa14.64□□□□□ -0.07
NEK9-210ENST00000557026 RAD54L2Q9Y4B4 1467 aa14.64□□□□□ -0.07
NEK9-210ENST00000557026 TATP17735 454 aaPredicted RBP14.64□□□□□ -0.07
NEK9-210ENST00000557026 NLRP2Q9NX02 1062 aa14.64□□□□□ -0.07
NEK9-210ENST00000557026 EHBP1L1Q8N3D4 1523 aa14.64□□□□□ -0.07
NEK9-210ENST00000557026 CNTLNQ9NXG0 1405 aa14.64□□□□□ -0.07
NEK9-210ENST00000557026 H3BQV1 296 aa14.63□□□□□ -0.07
NEK9-210ENST00000557026 SLC3A2P08195 630 aaKnown RBP14.63□□□□□ -0.07
NEK9-210ENST00000557026 IFFO2Q5TF58 517 aa14.63□□□□□ -0.07
NEK9-210ENST00000557026 KIF6Q6ZMV9 814 aa14.63□□□□□ -0.07
NEK9-210ENST00000557026 TROQ12816 1431 aaPredicted RBP14.62□□□□□ -0.07
NEK9-210ENST00000557026 PRDM2Q13029 1718 aa14.62□□□□□ -0.07
NEK9-210ENST00000557026 NUTM2FA1L443 756 aa14.62□□□□□ -0.07
NEK9-210ENST00000557026 GNL3LQ9NVN8 582 aaKnown RBP14.62□□□□□ -0.07
NEK9-210ENST00000557026 HIP1O00291 1037 aa14.62□□□□□ -0.07
NEK9-210ENST00000557026 CCDC43Q96MW1 224 aaKnown RBP14.62□□□□□ -0.07
NEK9-210ENST00000557026 SPG7Q9UQ90 795 aa14.62□□□□□ -0.07
NEK9-210ENST00000557026 XBP1P17861 261 aa14.61□□□□□ -0.07
NEK9-210ENST00000557026 NLRP6P59044 892 aa14.61□□□□□ -0.07
NEK9-210ENST00000557026 HECW1Q76N89 1606 aa14.61□□□□□ -0.07
NEK9-210ENST00000557026 LAMC3Q9Y6N6 1575 aa14.61□□□□□ -0.07
NEK9-210ENST00000557026 SYTL4Q96C24 671 aaPredicted RBP14.61□□□□□ -0.07
NEK9-210ENST00000557026 GNAI3P08754 354 aa14.6□□□□□ -0.07
NEK9-210ENST00000557026 SAFBQ15424 915 aaKnown RBP eCLIP14.6□□□□□ -0.07
NEK9-210ENST00000557026 TPD52L1Q16890 204 aaPredicted RBP14.6□□□□□ -0.07
NEK9-210ENST00000557026 SKOR2Q2VWA4 1001 aaPredicted RBP14.6□□□□□ -0.07
NEK9-210ENST00000557026 ERC1Q8IUD2 1116 aa14.6□□□□□ -0.07
NEK9-210ENST00000557026 BRMS1Q9HCU9 246 aa14.6□□□□□ -0.07
NEK9-210ENST00000557026 DNMBPQ6XZF7 1577 aa14.6□□□□□ -0.07
NEK9-210ENST00000557026 KRI1Q8N9T8 703 aaKnown RBP14.6□□□□□ -0.07
NEK9-210ENST00000557026 TPRNQ4KMQ1 711 aa14.59□□□□□ -0.07
NEK9-210ENST00000557026 B4GALNT3Q6L9W6 998 aa14.59□□□□□ -0.07
NEK9-210ENST00000557026 TBC1D2BQ9UPU7 963 aa14.59□□□□□ -0.07
NEK9-210ENST00000557026 KIAA0586Q9BVV6 1533 aa14.59□□□□□ -0.07
NEK9-210ENST00000557026 ATAD2Q6PL18 1390 aa14.59□□□□□ -0.07
NEK9-210ENST00000557026 TSPYL4Q9UJ04 414 aa14.59□□□□□ -0.07
NEK9-210ENST00000557026 CPLX1O14810 134 aa14.59□□□□□ -0.07
NEK9-210ENST00000557026 CCDC30Q5VVM6 783 aa14.59□□□□□ -0.07
NEK9-210ENST00000557026 DDX11L8A8MPP1 907 aa14.59□□□□□ -0.07
NEK9-210ENST00000557026 CCDC70Q6NSX1 233 aa14.59□□□□□ -0.07
NEK9-210ENST00000557026 RIC3Q7Z5B4 369 aa14.58□□□□□ -0.08
NEK9-210ENST00000557026 NCOA2Q15596 1464 aa14.58□□□□□ -0.08
NEK9-210ENST00000557026 CT47B1P0C2W7 299 aaPredicted RBP14.58□□□□□ -0.08
NEK9-210ENST00000557026 RIPK4P57078 832 aa14.58□□□□□ -0.08
NEK9-210ENST00000557026 GOLGA6L1Q8N7Z2 621 aa14.58□□□□□ -0.08
NEK9-210ENST00000557026 NINLQ9Y2I6 1382 aa14.58□□□□□ -0.08
NEK9-210ENST00000557026 LRRC9Q6ZRR7 1453 aa14.57□□□□□ -0.08
NEK9-210ENST00000557026 LRPPRCP42704 1394 aaKnown RBP14.57□□□□□ -0.08
NEK9-210ENST00000557026 WDHD1O75717 1129 aaPredicted RBP14.57□□□□□ -0.08
NEK9-210ENST00000557026 SART3Q15020 963 aaKnown RBP14.57□□□□□ -0.08
NEK9-210ENST00000557026 KCNH5Q8NCM2 988 aa14.57□□□□□ -0.08
NEK9-210ENST00000557026 R3HCC1Q9Y3T6 440 aaKnown RBP14.57□□□□□ -0.08
NEK9-210ENST00000557026 FKBP5Q13451 457 aaPredicted RBP14.57□□□□□ -0.08
NEK9-210ENST00000557026 TOPBP1Q92547 1522 aa14.57□□□□□ -0.08
NEK9-210ENST00000557026 IPO7O95373 1038 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms