RNA–Protein interactions for RNA: ENST00000556996.1

CCDC175-205, Transcript of coiled-coil domain containing 175, humanhuman

TSL 4

Gene CCDC175, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175-205ENST00000556996 SLC24A3Q9HC58 644 aa16.13■□□□□ 0.17
CCDC175-205ENST00000556996 HPS5Q9UPZ3 1129 aa16.13■□□□□ 0.17
CCDC175-205ENST00000556996 RNF40O75150 1001 aa16.12■□□□□ 0.17
CCDC175-205ENST00000556996 WBP1LQ9NX94 342 aa16.11■□□□□ 0.17
CCDC175-205ENST00000556996 TPRNQ4KMQ1 711 aa16.08■□□□□ 0.16
CCDC175-205ENST00000556996 HCSTQ9UBK5 93 aa16.08■□□□□ 0.16
CCDC175-205ENST00000556996 HDGFP51858 240 aaKnown RBP16.07■□□□□ 0.16
CCDC175-205ENST00000556996 TSR3Q9UJK0 312 aaKnown RBP16.07■□□□□ 0.16
CCDC175-205ENST00000556996 MDM2Q00987 491 aaPredicted RBP16.06■□□□□ 0.16
CCDC175-205ENST00000556996 SLF2Q8IX21 1173 aa16.05■□□□□ 0.16
CCDC175-205ENST00000556996 AK7Q96M32 723 aa16.05■□□□□ 0.16
CCDC175-205ENST00000556996 TRIM66O15016 1216 aa16.03■□□□□ 0.16
CCDC175-205ENST00000556996 DAXXQ9UER7 740 aaPredicted RBP16.03■□□□□ 0.16
CCDC175-205ENST00000556996 SLC10A3P09131 477 aa16.02■□□□□ 0.16
CCDC175-205ENST00000556996 PPP4CP60510 307 aa16.02■□□□□ 0.16
CCDC175-205ENST00000556996 REPIN1Q9BWE0 567 aaKnown RBP16.02■□□□□ 0.16
CCDC175-205ENST00000556996 AMHR2Q16671 573 aa16■□□□□ 0.15
CCDC175-205ENST00000556996 TMUB1Q9BVT8 246 aa16■□□□□ 0.15
CCDC175-205ENST00000556996 DDX11L8A8MPP1 907 aa15.97■□□□□ 0.15
CCDC175-205ENST00000556996 APLP1P51693 650 aa15.97■□□□□ 0.15
CCDC175-205ENST00000556996 PRKCSHP14314 528 aaPredicted RBP15.96■□□□□ 0.15
CCDC175-205ENST00000556996 SLC4A3P48751 1232 aa15.96■□□□□ 0.15
CCDC175-205ENST00000556996 GPCPD1Q9NPB8 672 aa15.96■□□□□ 0.15
CCDC175-205ENST00000556996 TTLL12Q14166 644 aaPredicted RBP15.95■□□□□ 0.14
CCDC175-205ENST00000556996 CLCN1P35523 988 aa15.94■□□□□ 0.14
CCDC175-205ENST00000556996 PARP9Q8IXQ6 854 aa15.94■□□□□ 0.14
CCDC175-205ENST00000556996 CFHP08603 1231 aa15.93■□□□□ 0.14
CCDC175-205ENST00000556996 RDH13Q8NBN7 331 aa15.93■□□□□ 0.14
CCDC175-205ENST00000556996 PDE4DQ08499 809 aa15.92■□□□□ 0.14
CCDC175-205ENST00000556996 FAM217BQ9NTX9 383 aaPredicted RBP15.92■□□□□ 0.14
CCDC175-205ENST00000556996 NYAP1Q6ZVC0 841 aa15.91■□□□□ 0.14
CCDC175-205ENST00000556996 GIGYF2Q6Y7W6 1299 aaKnown RBP15.9■□□□□ 0.14
CCDC175-205ENST00000556996 SULF1Q8IWU6 871 aa15.89■□□□□ 0.13
CCDC175-205ENST00000556996 CD46P15529 392 aa15.88■□□□□ 0.13
CCDC175-205ENST00000556996 NECTIN2Q92692 538 aa15.88■□□□□ 0.13
CCDC175-205ENST00000556996 ACTN4O43707 911 aaKnown RBP15.82■□□□□ 0.12
CCDC175-205ENST00000556996 SSTR3P32745 418 aaPredicted RBP15.82■□□□□ 0.12
CCDC175-205ENST00000556996 GCGRP47871 477 aa15.82■□□□□ 0.12
CCDC175-205ENST00000556996 KMT5BQ4FZB7 885 aa15.82■□□□□ 0.12
CCDC175-205ENST00000556996 RSPH4AQ5TD94 716 aa15.82■□□□□ 0.12
CCDC175-205ENST00000556996 MS4A1P11836 297 aa15.81■□□□□ 0.12
CCDC175-205ENST00000556996 MTRQ99707 1265 aa15.8■□□□□ 0.12
CCDC175-205ENST00000556996 GPBP1L1Q9HC44 474 aaPredicted RBP15.8■□□□□ 0.12
CCDC175-205ENST00000556996 TJAP1Q5JTD0 557 aa15.79■□□□□ 0.12
CCDC175-205ENST00000556996 PRR14Q9BWN1 585 aa15.79■□□□□ 0.12
CCDC175-205ENST00000556996 COPS2P61201 443 aa15.78■□□□□ 0.12
CCDC175-205ENST00000556996 FUT2Q10981 343 aa15.78■□□□□ 0.12
CCDC175-205ENST00000556996 BLOC1S3Q6QNY0 202 aa15.78■□□□□ 0.12
CCDC175-205ENST00000556996 PCDHB3Q9Y5E6 796 aa15.78■□□□□ 0.12
CCDC175-205ENST00000556996 ITGBL1O95965 494 aaPredicted RBP15.77■□□□□ 0.12
CCDC175-205ENST00000556996 PLA2G2EQ9NZK7 142 aa15.77■□□□□ 0.12
CCDC175-205ENST00000556996 PUS10Q3MIT2 529 aaKnown RBP15.76■□□□□ 0.11
CCDC175-205ENST00000556996 ZNF516Q92618 1163 aa15.74■□□□□ 0.11
CCDC175-205ENST00000556996 BEGAINQ9BUH8 593 aa15.72■□□□□ 0.11
CCDC175-205ENST00000556996 KDM4CQ9H3R0 1056 aa15.71■□□□□ 0.11
CCDC175-205ENST00000556996 IL21Q9HBE4 155 aa15.71■□□□□ 0.11
CCDC175-205ENST00000556996 KDM4AO75164 1064 aa15.7■□□□□ 0.1
CCDC175-205ENST00000556996 HLA-CQ95604 372 aa15.7■□□□□ 0.1
CCDC175-205ENST00000556996 KCNC4Q03721 635 aa15.68■□□□□ 0.1
CCDC175-205ENST00000556996 MORN1Q5T089 497 aa15.68■□□□□ 0.1
CCDC175-205ENST00000556996 TLL1O43897 1013 aa15.67■□□□□ 0.1
CCDC175-205ENST00000556996 ATP6V1AP38606 617 aa15.67■□□□□ 0.1
CCDC175-205ENST00000556996 BRPF1P55201 1214 aaPredicted RBP15.67■□□□□ 0.1
CCDC175-205ENST00000556996 HOXA2O43364 376 aa15.65■□□□□ 0.1
CCDC175-205ENST00000556996 NEUROD2Q15784 382 aa15.65■□□□□ 0.1
CCDC175-205ENST00000556996 NKX2-3Q8TAU0 364 aa15.65■□□□□ 0.1
CCDC175-205ENST00000556996 SPIRE2Q8WWL2 714 aa15.65■□□□□ 0.1
CCDC175-205ENST00000556996 ZPR1O75312 459 aa15.64■□□□□ 0.09
CCDC175-205ENST00000556996 GUCA2AQ02747 115 aa15.64■□□□□ 0.09
CCDC175-205ENST00000556996 NUTM1Q86Y26 1132 aa15.64■□□□□ 0.09
CCDC175-205ENST00000556996 SCUBE3Q8IX30 993 aa15.63■□□□□ 0.09
CCDC175-205ENST00000556996 SLC27A5Q9Y2P5 690 aa15.63■□□□□ 0.09
CCDC175-205ENST00000556996 IFFO2Q5TF58 517 aa15.62■□□□□ 0.09
CCDC175-205ENST00000556996 FAM117AQ9C073 453 aa15.62■□□□□ 0.09
CCDC175-205ENST00000556996 NR1I2O75469 434 aa15.61■□□□□ 0.09
CCDC175-205ENST00000556996 USP46P62068 366 aa15.61■□□□□ 0.09
CCDC175-205ENST00000556996 TBC1D2Q9BYX2 928 aa15.61■□□□□ 0.09
CCDC175-205ENST00000556996 MOXD2PA6NHM9 499 aa15.58■□□□□ 0.08
CCDC175-205ENST00000556996 NDUFV2P19404 249 aa15.58■□□□□ 0.08
CCDC175-205ENST00000556996 GRIPAP1Q4V328 841 aa15.57■□□□□ 0.08
CCDC175-205ENST00000556996 PLEKHG3A1L390 1219 aa15.56■□□□□ 0.08
CCDC175-205ENST00000556996 RNF19BQ6ZMZ0 732 aa15.56■□□□□ 0.08
CCDC175-205ENST00000556996 THAP11Q96EK4 314 aa15.56■□□□□ 0.08
CCDC175-205ENST00000556996 PCDHGC3Q9UN70 934 aa15.54■□□□□ 0.08
CCDC175-205ENST00000556996 A0A0G2JS52 829 aa15.53■□□□□ 0.08
CCDC175-205ENST00000556996 MYSM1Q5VVJ2 828 aa15.52■□□□□ 0.08
CCDC175-205ENST00000556996 ADH1BP00325 375 aa15.51■□□□□ 0.07
CCDC175-205ENST00000556996 FDX1P10109 184 aa15.51■□□□□ 0.07
CCDC175-205ENST00000556996 RSBN1LQ6PCB5 846 aaPredicted RBP15.5■□□□□ 0.07
CCDC175-205ENST00000556996 BRICD5Q6PL45 260 aa15.5■□□□□ 0.07
CCDC175-205ENST00000556996 SYMPKQ92797 1274 aaKnown RBP15.5■□□□□ 0.07
CCDC175-205ENST00000556996 SPSB2Q99619 263 aa15.5■□□□□ 0.07
CCDC175-205ENST00000556996 DDRGK1Q96HY6 314 aa15.49■□□□□ 0.07
CCDC175-205ENST00000556996 FMNL1O95466 1100 aaPredicted RBP15.48■□□□□ 0.07
CCDC175-205ENST00000556996 LIMD1Q9UGP4 676 aa15.48■□□□□ 0.07
CCDC175-205ENST00000556996 FAM160A2Q8N612 972 aaPredicted RBP15.47■□□□□ 0.07
CCDC175-205ENST00000556996 SALL2Q9Y467 1007 aaPredicted RBP15.47■□□□□ 0.07
CCDC175-205ENST00000556996 SPTLC1O15269 473 aa15.46■□□□□ 0.07
CCDC175-205ENST00000556996 S1PR4O95977 384 aa15.46■□□□□ 0.07
CCDC175-205ENST00000556996 DIXDC1Q155Q3 683 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms