RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 SLFN5Q08AF3 891 aa14.86□□□□□ -0.03
SRP54-213ENST00000556994 FAM161AQ3B820 660 aa14.86□□□□□ -0.03
SRP54-213ENST00000556994 ANO8Q9HCE9 1232 aaPredicted RBP14.86□□□□□ -0.03
SRP54-213ENST00000556994 BCAR3O75815 825 aa14.86□□□□□ -0.03
SRP54-213ENST00000556994 APAF1O14727 1248 aa14.85□□□□□ -0.03
SRP54-213ENST00000556994 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.85□□□□□ -0.03
SRP54-213ENST00000556994 MAST1Q9Y2H9 1570 aa14.85□□□□□ -0.03
SRP54-213ENST00000556994 ATP10AO60312 1499 aa14.83□□□□□ -0.04
SRP54-213ENST00000556994 GSE1Q14687 1217 aa14.83□□□□□ -0.04
SRP54-213ENST00000556994 DUOX2Q9NRD8 1548 aa14.83□□□□□ -0.04
SRP54-213ENST00000556994 RNF17Q9BXT8 1623 aaKnown RBP14.82□□□□□ -0.04
SRP54-213ENST00000556994 DMRT2Q9Y5R5 561 aa14.82□□□□□ -0.04
SRP54-213ENST00000556994 PLXNC1O60486 1568 aa14.81□□□□□ -0.04
SRP54-213ENST00000556994 BRPF3Q9ULD4 1205 aa14.81□□□□□ -0.04
SRP54-213ENST00000556994 CDCA8Q53HL2 280 aa14.81□□□□□ -0.04
SRP54-213ENST00000556994 TRMT2AQ8IZ69 625 aaKnown RBP14.8□□□□□ -0.04
SRP54-213ENST00000556994 FRAT1Q92837 279 aaPredicted RBP14.8□□□□□ -0.04
SRP54-213ENST00000556994 ASXL1Q8IXJ9 1541 aa14.8□□□□□ -0.04
SRP54-213ENST00000556994 MADDQ8WXG6 1647 aa14.79□□□□□ -0.04
SRP54-213ENST00000556994 IGHDP01880 384 aa14.79□□□□□ -0.04
SRP54-213ENST00000556994 SCAF11Q99590 1463 aaKnown RBP14.78□□□□□ -0.04
SRP54-213ENST00000556994 FRAT2O75474 233 aaPredicted RBP14.78□□□□□ -0.04
SRP54-213ENST00000556994 IQGAP1P46940 1657 aa14.78□□□□□ -0.04
SRP54-213ENST00000556994 TRAPPC8Q9Y2L5 1435 aa14.77□□□□□ -0.04
SRP54-213ENST00000556994 AFAP1Q8N556 730 aa14.77□□□□□ -0.04
SRP54-213ENST00000556994 PIK3C2GO75747 1445 aa14.77□□□□□ -0.05
SRP54-213ENST00000556994 EFCAB2Q5VUJ9 269 aa14.77□□□□□ -0.05
SRP54-213ENST00000556994 SYNMO15061 1565 aa14.77□□□□□ -0.05
SRP54-213ENST00000556994 NKTRP30414 1462 aaKnown RBP14.76□□□□□ -0.05
SRP54-213ENST00000556994 CFAP70Q5T0N1 1121 aa14.76□□□□□ -0.05
SRP54-213ENST00000556994 SHROOM2Q13796 1616 aa14.75□□□□□ -0.05
SRP54-213ENST00000556994 E9PSI1 815 aa14.75□□□□□ -0.05
SRP54-213ENST00000556994 PANK1Q8TE04 598 aa14.75□□□□□ -0.05
SRP54-213ENST00000556994 CARD14Q9BXL6 1004 aa14.75□□□□□ -0.05
SRP54-213ENST00000556994 CHD1O14646 1710 aa14.75□□□□□ -0.05
SRP54-213ENST00000556994 ERCC6L2Q5T890 1561 aa14.74□□□□□ -0.05
SRP54-213ENST00000556994 NEUROD2Q15784 382 aa14.74□□□□□ -0.05
SRP54-213ENST00000556994 COG6Q9Y2V7 657 aa14.74□□□□□ -0.05
SRP54-213ENST00000556994 MYOM1P52179 1685 aa14.74□□□□□ -0.05
SRP54-213ENST00000556994 SEC24BO95487 1268 aa14.74□□□□□ -0.05
SRP54-213ENST00000556994 SPAG9O60271 1321 aaKnown RBP14.73□□□□□ -0.05
SRP54-213ENST00000556994 CLASP1Q7Z460 1538 aa14.73□□□□□ -0.05
SRP54-213ENST00000556994 PLCH2O75038 1416 aa14.73□□□□□ -0.05
SRP54-213ENST00000556994 CANXP27824 592 aaKnown RBP14.73□□□□□ -0.05
SRP54-213ENST00000556994 EIF3AQ14152 1382 aaKnown RBP14.73□□□□□ -0.05
SRP54-213ENST00000556994 TNNT2P45379 298 aaPredicted RBP14.72□□□□□ -0.05
SRP54-213ENST00000556994 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.72□□□□□ -0.05
SRP54-213ENST00000556994 SCAPERQ9BY12 1400 aa14.72□□□□□ -0.05
SRP54-213ENST00000556994 SPHKAPQ2M3C7 1700 aa14.71□□□□□ -0.05
SRP54-213ENST00000556994 RRP7AQ9Y3A4 280 aaKnown RBP14.71□□□□□ -0.05
SRP54-213ENST00000556994 CLTCL1P53675 1640 aa14.71□□□□□ -0.05
SRP54-213ENST00000556994 USP19O94966 1318 aa14.71□□□□□ -0.06
SRP54-213ENST00000556994 NPC1L1Q9UHC9 1359 aa14.71□□□□□ -0.06
SRP54-213ENST00000556994 TRPM2O94759 1503 aa14.7□□□□□ -0.06
SRP54-213ENST00000556994 WWC1Q8IX03 1113 aa14.7□□□□□ -0.06
SRP54-213ENST00000556994 ADGRF5Q8IZF2 1346 aa14.7□□□□□ -0.06
SRP54-213ENST00000556994 CENPJQ9HC77 1338 aaPredicted RBP14.7□□□□□ -0.06
SRP54-213ENST00000556994 ABCC2Q92887 1545 aa14.7□□□□□ -0.06
SRP54-213ENST00000556994 CLUAP1Q96AJ1 413 aa14.69□□□□□ -0.06
SRP54-213ENST00000556994 CEP152O94986 1710 aa14.69□□□□□ -0.06
SRP54-213ENST00000556994 PTPRTO14522 1441 aa14.68□□□□□ -0.06
SRP54-213ENST00000556994 KIF3BO15066 747 aa14.68□□□□□ -0.06
SRP54-213ENST00000556994 TNNQ9UQP3 1299 aa14.68□□□□□ -0.06
SRP54-213ENST00000556994 KDM5AP29375 1690 aaKnown RBP14.68□□□□□ -0.06
SRP54-213ENST00000556994 ABCC1P33527 1531 aa14.68□□□□□ -0.06
SRP54-213ENST00000556994 ERVK-7P63135 1459 aa14.68□□□□□ -0.06
SRP54-213ENST00000556994 CGNL1Q0VF96 1302 aa14.68□□□□□ -0.06
SRP54-213ENST00000556994 PDE3AQ14432 1141 aa14.67□□□□□ -0.06
SRP54-213ENST00000556994 STAC3Q96MF2 364 aa14.67□□□□□ -0.06
SRP54-213ENST00000556994 BCL2L13Q9BXK5 485 aa14.67□□□□□ -0.06
SRP54-213ENST00000556994 UGGT1Q9NYU2 1555 aa14.66□□□□□ -0.06
SRP54-213ENST00000556994 SLKQ9H2G2 1235 aaPredicted RBP14.66□□□□□ -0.06
SRP54-213ENST00000556994 RLBP1P12271 317 aa14.64□□□□□ -0.07
SRP54-213ENST00000556994 MORC1Q86VD1 984 aa14.64□□□□□ -0.07
SRP54-213ENST00000556994 PCDHB15Q9Y5E8 787 aa14.64□□□□□ -0.07
SRP54-213ENST00000556994 RARSP54136 660 aaKnown RBP14.63□□□□□ -0.07
SRP54-213ENST00000556994 TCP11L2Q8N4U5 519 aa14.63□□□□□ -0.07
SRP54-213ENST00000556994 SLC12A5Q9H2X9 1139 aa14.63□□□□□ -0.07
SRP54-213ENST00000556994 MAPK8IP3Q9UPT6 1336 aa14.63□□□□□ -0.07
SRP54-213ENST00000556994 CHGAP10645 457 aaKnown RBP14.63□□□□□ -0.07
SRP54-213ENST00000556994 TRAK1Q9UPV9 953 aa14.63□□□□□ -0.07
SRP54-213ENST00000556994 ZCCHC11Q5TAX3 1644 aaKnown RBP14.63□□□□□ -0.07
SRP54-213ENST00000556994 KANK1Q14678 1352 aa14.62□□□□□ -0.07
SRP54-213ENST00000556994 ZFYVE16Q7Z3T8 1539 aa14.62□□□□□ -0.07
SRP54-213ENST00000556994 POGKQ9P215 609 aa14.61□□□□□ -0.07
SRP54-213ENST00000556994 POLR3AO14802 1390 aaPredicted RBP14.61□□□□□ -0.07
SRP54-213ENST00000556994 RUNDC1Q96C34 613 aa14.6□□□□□ -0.07
SRP54-213ENST00000556994 ABCA6Q8N139 1617 aa14.6□□□□□ -0.07
SRP54-213ENST00000556994 RTEL1-TNFRSF6BF6WH68 1400 aa14.6□□□□□ -0.07
SRP54-213ENST00000556994 NSD3Q9BZ95 1437 aa14.6□□□□□ -0.07
SRP54-213ENST00000556994 NGEFQ8N5V2 710 aa14.6□□□□□ -0.07
SRP54-213ENST00000556994 TET3O43151 1660 aa14.6□□□□□ -0.07
SRP54-213ENST00000556994 VIRMAQ69YN4 1812 aaKnown RBP14.59□□□□□ -0.07
SRP54-213ENST00000556994 BECN1Q14457 450 aa14.59□□□□□ -0.07
SRP54-213ENST00000556994 PDZRN3Q9UPQ7 1066 aa14.59□□□□□ -0.07
SRP54-213ENST00000556994 MAP3K4Q9Y6R4 1608 aa14.59□□□□□ -0.07
SRP54-213ENST00000556994 SLC24A1O60721 1099 aa14.59□□□□□ -0.07
SRP54-213ENST00000556994 MTHFSP49914 203 aa14.58□□□□□ -0.08
SRP54-213ENST00000556994 TMEM132EQ6IEE7 984 aa14.58□□□□□ -0.08
SRP54-213ENST00000556994 SPRYD3Q8NCJ5 442 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms