RNA–Protein interactions for RNA: ENST00000556938.1

SLC38A6-220, Transcript of solute carrier family 38 member 6, humanhuman

TSL 4

Gene SLC38A6, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-220ENST00000556938 RBM27Q9P2N5 1060 aaKnown RBP10.33□□□□□ -0.76
SLC38A6-220ENST00000556938 HDGFP51858 240 aaKnown RBP10.32□□□□□ -0.76
SLC38A6-220ENST00000556938 TRIM67Q6ZTA4 783 aa10.32□□□□□ -0.76
SLC38A6-220ENST00000556938 GGCXP38435 758 aa10.3□□□□□ -0.76
SLC38A6-220ENST00000556938 SWT1Q5T5J6 900 aaKnown RBP10.3□□□□□ -0.76
SLC38A6-220ENST00000556938 FCHSD2O94868 740 aa10.29□□□□□ -0.76
SLC38A6-220ENST00000556938 EMID1Q96A84 441 aaPredicted RBP10.29□□□□□ -0.76
SLC38A6-220ENST00000556938 ZPR1O75312 459 aa10.28□□□□□ -0.76
SLC38A6-220ENST00000556938 TMUB1Q9BVT8 246 aa10.28□□□□□ -0.76
SLC38A6-220ENST00000556938 POTECB2RU33 542 aa10.25□□□□□ -0.77
SLC38A6-220ENST00000556938 RNF223E7ERA6 249 aa10.25□□□□□ -0.77
SLC38A6-220ENST00000556938 GPR37O15354 613 aa10.25□□□□□ -0.77
SLC38A6-220ENST00000556938 MYT1Q01538 1121 aa10.25□□□□□ -0.77
SLC38A6-220ENST00000556938 SLF2Q8IX21 1173 aa10.25□□□□□ -0.77
SLC38A6-220ENST00000556938 SLC19A1P41440 591 aa10.24□□□□□ -0.77
SLC38A6-220ENST00000556938 FAM161AQ3B820 660 aa10.24□□□□□ -0.77
SLC38A6-220ENST00000556938 NECTIN2Q92692 538 aa10.24□□□□□ -0.77
SLC38A6-220ENST00000556938 EYA1Q99502 592 aa10.23□□□□□ -0.77
SLC38A6-220ENST00000556938 FECHP22830 423 aa10.22□□□□□ -0.77
SLC38A6-220ENST00000556938 HIC1Q14526 733 aa10.22□□□□□ -0.77
SLC38A6-220ENST00000556938 PKDCCQ504Y2 493 aa10.22□□□□□ -0.77
SLC38A6-220ENST00000556938 GPIHBP1Q8IV16 184 aa10.22□□□□□ -0.77
SLC38A6-220ENST00000556938 ADGRG1Q9Y653 693 aa10.22□□□□□ -0.77
SLC38A6-220ENST00000556938 BLOC1S3Q6QNY0 202 aa10.21□□□□□ -0.77
SLC38A6-220ENST00000556938 PCDHB3Q9Y5E6 796 aa10.21□□□□□ -0.77
SLC38A6-220ENST00000556938 TULP1O00294 542 aaPredicted RBP10.2□□□□□ -0.78
SLC38A6-220ENST00000556938 GNPATO15228 680 aa10.2□□□□□ -0.78
SLC38A6-220ENST00000556938 TLL1O43897 1013 aa10.2□□□□□ -0.78
SLC38A6-220ENST00000556938 SPRYD7Q5W111 196 aa10.2□□□□□ -0.78
SLC38A6-220ENST00000556938 PPEF1O14829 653 aaPredicted RBP10.18□□□□□ -0.78
SLC38A6-220ENST00000556938 DGAT1O75907 488 aa10.18□□□□□ -0.78
SLC38A6-220ENST00000556938 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.18□□□□□ -0.78
SLC38A6-220ENST00000556938 SLC24A1O60721 1099 aa10.17□□□□□ -0.78
SLC38A6-220ENST00000556938 ZNF598Q86UK7 904 aaKnown RBP10.17□□□□□ -0.78
SLC38A6-220ENST00000556938 RBM46Q8TBY0 533 aaKnown RBP10.17□□□□□ -0.78
SLC38A6-220ENST00000556938 PRR20EP86478 221 aa10.16□□□□□ -0.78
SLC38A6-220ENST00000556938 PRR20CP86479 221 aa10.16□□□□□ -0.78
SLC38A6-220ENST00000556938 PRR20DP86480 221 aa10.16□□□□□ -0.78
SLC38A6-220ENST00000556938 PRR20BP86481 221 aa10.16□□□□□ -0.78
SLC38A6-220ENST00000556938 PRR20AP86496 221 aa10.16□□□□□ -0.78
SLC38A6-220ENST00000556938 LIAT1Q6ZQX7 453 aa10.16□□□□□ -0.78
SLC38A6-220ENST00000556938 PRR14Q9BWN1 585 aa10.15□□□□□ -0.78
SLC38A6-220ENST00000556938 RCCD1A6NED2 376 aa10.14□□□□□ -0.79
SLC38A6-220ENST00000556938 FAM187AA6NFU0 413 aa10.14□□□□□ -0.79
SLC38A6-220ENST00000556938 TNFRSF10AO00220 468 aa10.14□□□□□ -0.79
SLC38A6-220ENST00000556938 S1PR4O95977 384 aa10.14□□□□□ -0.79
SLC38A6-220ENST00000556938 ZNF697Q5TEC3 545 aa10.14□□□□□ -0.79
SLC38A6-220ENST00000556938 ANKLE1Q8NAG6 615 aa10.14□□□□□ -0.79
SLC38A6-220ENST00000556938 GDF9O60383 454 aa10.13□□□□□ -0.79
SLC38A6-220ENST00000556938 DNAJB2P25686 324 aa10.13□□□□□ -0.79
SLC38A6-220ENST00000556938 SLC4A3P48751 1232 aa10.13□□□□□ -0.79
SLC38A6-220ENST00000556938 PXYLP1Q8TE99 480 aa10.13□□□□□ -0.79
SLC38A6-220ENST00000556938 OATP04181 439 aa10.12□□□□□ -0.79
SLC38A6-220ENST00000556938 LMOD2Q6P5Q4 547 aa10.12□□□□□ -0.79
SLC38A6-220ENST00000556938 ST8SIA5O15466 376 aa10.11□□□□□ -0.79
SLC38A6-220ENST00000556938 METTL3Q86U44 580 aaKnown RBP10.11□□□□□ -0.79
SLC38A6-220ENST00000556938 TMEM134Q9H6X4 195 aa10.11□□□□□ -0.79
SLC38A6-220ENST00000556938 LCE2AQ5TA79 106 aaPredicted RBP10.1□□□□□ -0.79
SLC38A6-220ENST00000556938 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.08□□□□□ -0.8
SLC38A6-220ENST00000556938 PLA2G2CQ5R387 149 aa10.08□□□□□ -0.8
SLC38A6-220ENST00000556938 TREML4Q6UXN2 200 aa10.08□□□□□ -0.8
SLC38A6-220ENST00000556938 NLRP7Q8WX94 980 aa10.08□□□□□ -0.8
SLC38A6-220ENST00000556938 AAASQ9NRG9 546 aa10.08□□□□□ -0.8
SLC38A6-220ENST00000556938 PHOX2BQ99453 314 aa10.07□□□□□ -0.8
SLC38A6-220ENST00000556938 ACTN4O43707 911 aaKnown RBP10.06□□□□□ -0.8
SLC38A6-220ENST00000556938 MAP2K5Q13163 448 aa10.05□□□□□ -0.8
SLC38A6-220ENST00000556938 ADH1BP00325 375 aa10.04□□□□□ -0.8
SLC38A6-220ENST00000556938 CFHP08603 1231 aa10.04□□□□□ -0.8
SLC38A6-220ENST00000556938 IRF6O14896 467 aa10.03□□□□□ -0.8
SLC38A6-220ENST00000556938 KMT5BQ4FZB7 885 aa10.03□□□□□ -0.8
SLC38A6-220ENST00000556938 SLC10A3P09131 477 aa10.02□□□□□ -0.81
SLC38A6-220ENST00000556938 ZC3H15Q8WU90 426 aaKnown RBP10.02□□□□□ -0.81
SLC38A6-220ENST00000556938 PKD2L1Q9P0L9 805 aa10.02□□□□□ -0.81
SLC38A6-220ENST00000556938 MINK1Q8N4C8 1332 aaPredicted RBP10.02□□□□□ -0.81
SLC38A6-220ENST00000556938 SLC6A16Q9GZN6 736 aa10.01□□□□□ -0.81
SLC38A6-220ENST00000556938 DACH1Q9UI36 760 aa10.01□□□□□ -0.81
SLC38A6-220ENST00000556938 FOXC1Q12948 553 aa10□□□□□ -0.81
SLC38A6-220ENST00000556938 CCDC102AQ96A19 550 aa10□□□□□ -0.81
SLC38A6-220ENST00000556938 DAXXQ9UER7 740 aaPredicted RBP10□□□□□ -0.81
SLC38A6-220ENST00000556938 NR1I2O75469 434 aa9.98□□□□□ -0.81
SLC38A6-220ENST00000556938 ZMYND10O75800 440 aa9.98□□□□□ -0.81
SLC38A6-220ENST00000556938 BARGINQ6ZT62 677 aa9.98□□□□□ -0.81
SLC38A6-220ENST00000556938 SCUBE3Q8IX30 993 aa9.96□□□□□ -0.82
SLC38A6-220ENST00000556938 KRI1Q8N9T8 703 aaKnown RBP9.96□□□□□ -0.82
SLC38A6-220ENST00000556938 DDX11L8A8MPP1 907 aa9.95□□□□□ -0.82
SLC38A6-220ENST00000556938 PUS10Q3MIT2 529 aaKnown RBP9.95□□□□□ -0.82
SLC38A6-220ENST00000556938 CRIPAKQ8N1N5 446 aa9.95□□□□□ -0.82
SLC38A6-220ENST00000556938 GMPR2Q9P2T1 348 aaKnown RBP9.95□□□□□ -0.82
SLC38A6-220ENST00000556938 MDM2Q00987 491 aaPredicted RBP9.94□□□□□ -0.82
SLC38A6-220ENST00000556938 RDH13Q8NBN7 331 aa9.94□□□□□ -0.82
SLC38A6-220ENST00000556938 WFS1O76024 890 aa9.93□□□□□ -0.82
SLC38A6-220ENST00000556938 BCANQ96GW7 911 aa9.93□□□□□ -0.82
SLC38A6-220ENST00000556938 AVPP01185 164 aa9.92□□□□□ -0.82
SLC38A6-220ENST00000556938 RSPH4AQ5TD94 716 aa9.92□□□□□ -0.82
SLC38A6-220ENST00000556938 SPSB2Q99619 263 aa9.92□□□□□ -0.82
SLC38A6-220ENST00000556938 TOR4AQ9NXH8 423 aa9.92□□□□□ -0.82
SLC38A6-220ENST00000556938 C11orf95C9JLR9 678 aaPredicted RBP9.9□□□□□ -0.82
SLC38A6-220ENST00000556938 SULF1Q8IWU6 871 aa9.9□□□□□ -0.82
SLC38A6-220ENST00000556938 AXIN1O15169 862 aa9.89□□□□□ -0.83
SLC38A6-220ENST00000556938 NFX1Q12986 1120 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms