RNA–Protein interactions for RNA: ENST00000556674.1

TGFB3-206, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-206ENST00000556674 EID1Q9Y6B2 187 aa24.24■■□□□ 1.47
TGFB3-206ENST00000556674 PIK3C2BO00750 1634 aa24.24■■□□□ 1.47
TGFB3-206ENST00000556674 E9PCH4 1651 aa24.24■■□□□ 1.47
TGFB3-206ENST00000556674 ACIN1Q9UKV3 1341 aaKnown RBP24.23■■□□□ 1.47
TGFB3-206ENST00000556674 TMEM94Q12767 1356 aa24.23■■□□□ 1.47
TGFB3-206ENST00000556674 ROBO1Q9Y6N7 1651 aa24.23■■□□□ 1.47
TGFB3-206ENST00000556674 STAG3Q9UJ98 1225 aa24.22■■□□□ 1.47
TGFB3-206ENST00000556674 IDI1Q13907 227 aa24.21■■□□□ 1.47
TGFB3-206ENST00000556674 SETD1AO15047 1707 aaKnown RBP24.2■■□□□ 1.46
TGFB3-206ENST00000556674 TMEM2Q9UHN6 1383 aa24.19■■□□□ 1.46
TGFB3-206ENST00000556674 ADGRB3O60242 1522 aa24.19■■□□□ 1.46
TGFB3-206ENST00000556674 RBM33Q96EV2 1170 aaKnown RBP24.18■■□□□ 1.46
TGFB3-206ENST00000556674 KCNA6P17658 529 aa24.16■■□□□ 1.46
TGFB3-206ENST00000556674 PROSER2Q86WR7 435 aaPredicted RBP24.14■■□□□ 1.45
TGFB3-206ENST00000556674 TRIM52Q96A61 297 aa24.13■■□□□ 1.45
TGFB3-206ENST00000556674 SLC26A8Q96RN1 970 aa24.13■■□□□ 1.45
TGFB3-206ENST00000556674 SPHKAPQ2M3C7 1700 aa24.11■■□□□ 1.45
TGFB3-206ENST00000556674 HDGFP51858 240 aaKnown RBP24.1■■□□□ 1.45
TGFB3-206ENST00000556674 TMEM131LA2VDJ0 1609 aa24.09■■□□□ 1.45
TGFB3-206ENST00000556674 PHLPP1O60346 1717 aa24.08■■□□□ 1.45
TGFB3-206ENST00000556674 SETD5Q9C0A6 1442 aa24.07■■□□□ 1.44
TGFB3-206ENST00000556674 NWD1Q149M9 1564 aa24.07■■□□□ 1.44
TGFB3-206ENST00000556674 NKTRP30414 1462 aaKnown RBP24.07■■□□□ 1.44
TGFB3-206ENST00000556674 JCADQ9P266 1359 aa24.06■■□□□ 1.44
TGFB3-206ENST00000556674 SLC4A1APQ9BWU0 796 aaKnown RBP24.06■■□□□ 1.44
TGFB3-206ENST00000556674 TRPM2O94759 1503 aa24.05■■□□□ 1.44
TGFB3-206ENST00000556674 MSH6P52701 1360 aa24.05■■□□□ 1.44
TGFB3-206ENST00000556674 SLAIN2Q9P270 581 aa24.05■■□□□ 1.44
TGFB3-206ENST00000556674 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.02■■□□□ 1.44
TGFB3-206ENST00000556674 ZFYVE9O95405 1425 aa24.01■■□□□ 1.43
TGFB3-206ENST00000556674 CHGAP10645 457 aaKnown RBP24.01■■□□□ 1.43
TGFB3-206ENST00000556674 MYO5BQ9ULV0 1848 aa24■■□□□ 1.43
TGFB3-206ENST00000556674 RIMS2Q9UQ26 1411 aa24■■□□□ 1.43
TGFB3-206ENST00000556674 COL16A1Q07092 1604 aaPredicted RBP23.99■■□□□ 1.43
TGFB3-206ENST00000556674 UPF1Q92900 1129 aaKnown RBP eCLIP23.99■■□□□ 1.43
TGFB3-206ENST00000556674 LRP6O75581 1613 aa23.99■■□□□ 1.43
TGFB3-206ENST00000556674 BCANQ96GW7 911 aa23.98■■□□□ 1.43
TGFB3-206ENST00000556674 PPP1R15AO75807 674 aaPredicted RBP23.97■■□□□ 1.43
TGFB3-206ENST00000556674 PLEKHG1Q9ULL1 1385 aa23.96■■□□□ 1.43
TGFB3-206ENST00000556674 CLTCL1P53675 1640 aa23.95■■□□□ 1.43
TGFB3-206ENST00000556674 RAB3GAP2Q9H2M9 1393 aa23.95■■□□□ 1.42
TGFB3-206ENST00000556674 HRCP23327 699 aa23.95■■□□□ 1.42
TGFB3-206ENST00000556674 MPHOSPH9Q99550 1183 aa23.95■■□□□ 1.42
TGFB3-206ENST00000556674 KIF1BO60333 1816 aa23.94■■□□□ 1.42
TGFB3-206ENST00000556674 SPATA31A6Q5VVP1 1343 aa23.93■■□□□ 1.42
TGFB3-206ENST00000556674 MEX3CQ5U5Q3 659 aaKnown RBP23.93■■□□□ 1.42
TGFB3-206ENST00000556674 ZNF772Q68DY9 489 aaPredicted RBP23.93■■□□□ 1.42
TGFB3-206ENST00000556674 CHD2O14647 1828 aaKnown RBP23.92■■□□□ 1.42
TGFB3-206ENST00000556674 DIP2AQ14689 1571 aa23.88■■□□□ 1.41
TGFB3-206ENST00000556674 ZNF326Q5BKZ1 582 aaKnown RBP23.88■■□□□ 1.41
TGFB3-206ENST00000556674 CCDC144AA2RUR9 1427 aa23.87■■□□□ 1.41
TGFB3-206ENST00000556674 SHPRHQ149N8 1683 aa23.86■■□□□ 1.41
TGFB3-206ENST00000556674 AHDC1Q5TGY3 1603 aaPredicted RBP23.85■■□□□ 1.41
TGFB3-206ENST00000556674 C14orf37Q86TY3 774 aa23.85■■□□□ 1.41
TGFB3-206ENST00000556674 TBX22Q9Y458 520 aa23.85■■□□□ 1.41
TGFB3-206ENST00000556674 NCOA3Q9Y6Q9 1424 aa23.84■■□□□ 1.41
TGFB3-206ENST00000556674 RXRBP28702 533 aa23.84■■□□□ 1.41
TGFB3-206ENST00000556674 RPGRIP1LQ68CZ1 1315 aa23.84■■□□□ 1.41
TGFB3-206ENST00000556674 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.82■■□□□ 1.4
TGFB3-206ENST00000556674 PIK3R4Q99570 1358 aa23.82■■□□□ 1.4
TGFB3-206ENST00000556674 FOXD1Q16676 465 aa23.82■■□□□ 1.4
TGFB3-206ENST00000556674 NEXMIFQ5QGS0 1516 aa23.82■■□□□ 1.4
TGFB3-206ENST00000556674 CADPS2Q86UW7 1296 aa23.81■■□□□ 1.4
TGFB3-206ENST00000556674 SETBP1Q9Y6X0 1596 aa23.81■■□□□ 1.4
TGFB3-206ENST00000556674 ADAMTS13Q76LX8 1427 aa23.8■■□□□ 1.4
TGFB3-206ENST00000556674 VGFO15240 615 aaPredicted RBP23.79■■□□□ 1.4
TGFB3-206ENST00000556674 NUTM2DQ5VT03 806 aaPredicted RBP23.79■■□□□ 1.4
TGFB3-206ENST00000556674 C19orf44Q9H6X5 657 aa23.79■■□□□ 1.4
TGFB3-206ENST00000556674 CDK12Q9NYV4 1490 aaPredicted RBP23.79■■□□□ 1.4
TGFB3-206ENST00000556674 NUTM2BA6NNL0 878 aaPredicted RBP23.78■■□□□ 1.4
TGFB3-206ENST00000556674 NUTM2EB1AL46 878 aaPredicted RBP23.78■■□□□ 1.4
TGFB3-206ENST00000556674 ATF3P18847 181 aa23.78■■□□□ 1.4
TGFB3-206ENST00000556674 NUTM2AQ8IVF1 878 aaPredicted RBP23.78■■□□□ 1.4
TGFB3-206ENST00000556674 BRINP3Q76B58 766 aa23.75■■□□□ 1.39
TGFB3-206ENST00000556674 AFF2P51816 1311 aa23.74■■□□□ 1.39
TGFB3-206ENST00000556674 SPATA31E1Q6ZUB1 1445 aa23.73■■□□□ 1.39
TGFB3-206ENST00000556674 NRXN3Q9Y4C0 1643 aa23.73■■□□□ 1.39
TGFB3-206ENST00000556674 PPLO60437 1756 aa23.73■■□□□ 1.39
TGFB3-206ENST00000556674 ANKRD30BQ9BXX2 1392 aa23.71■■□□□ 1.39
TGFB3-206ENST00000556674 ASXL1Q8IXJ9 1541 aa23.68■■□□□ 1.38
TGFB3-206ENST00000556674 RGS12O14924 1447 aa23.67■■□□□ 1.38
TGFB3-206ENST00000556674 AMOTL2Q9Y2J4 779 aa23.67■■□□□ 1.38
TGFB3-206ENST00000556674 PTPRUQ92729 1446 aa23.67■■□□□ 1.38
TGFB3-206ENST00000556674 IFT172Q9UG01 1749 aa23.65■■□□□ 1.38
TGFB3-206ENST00000556674 RGL3Q3MIN7 710 aa23.65■■□□□ 1.38
TGFB3-206ENST00000556674 DCCP43146 1447 aa23.64■■□□□ 1.37
TGFB3-206ENST00000556674 NHSL1Q5SYE7 1610 aa23.63■■□□□ 1.37
TGFB3-206ENST00000556674 XRN1Q8IZH2 1706 aaKnown RBP23.63■■□□□ 1.37
TGFB3-206ENST00000556674 C8orf37Q96NL8 207 aa23.63■■□□□ 1.37
TGFB3-206ENST00000556674 QTRT2Q9H974 415 aaKnown RBP23.63■■□□□ 1.37
TGFB3-206ENST00000556674 RBM6P78332 1123 aaKnown RBP23.62■■□□□ 1.37
TGFB3-206ENST00000556674 MST1RQ04912 1400 aa23.61■■□□□ 1.37
TGFB3-206ENST00000556674 METP08581 1390 aa23.61■■□□□ 1.37
TGFB3-206ENST00000556674 LRRC59Q96AG4 307 aaKnown RBP23.6■■□□□ 1.37
TGFB3-206ENST00000556674 TRIM26Q12899 539 aaPredicted RBP23.59■■□□□ 1.37
TGFB3-206ENST00000556674 MYOM2P54296 1465 aa23.59■■□□□ 1.37
TGFB3-206ENST00000556674 PNPLA6Q8IY17 1366 aa23.58■■□□□ 1.37
TGFB3-206ENST00000556674 DDX17Q92841 729 aaKnown RBP23.58■■□□□ 1.37
TGFB3-206ENST00000556674 STAC3Q96MF2 364 aa23.58■■□□□ 1.37
TGFB3-206ENST00000556674 PRAG1Q86YV5 1406 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms