RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 HDGFP51858 240 aaKnown RBP16.06■□□□□ 0.16
SPTLC2-205ENST00000556607 XIRP1Q702N8 1843 aaKnown RBP16.03■□□□□ 0.16
SPTLC2-205ENST00000556607 TMEM131LA2VDJ0 1609 aa16.03■□□□□ 0.16
SPTLC2-205ENST00000556607 NUTM2DQ5VT03 806 aaPredicted RBP16.02■□□□□ 0.16
SPTLC2-205ENST00000556607 RIMS2Q9UQ26 1411 aa16.02■□□□□ 0.15
SPTLC2-205ENST00000556607 KCNA6P17658 529 aa16.01■□□□□ 0.15
SPTLC2-205ENST00000556607 ILDR2Q71H61 639 aa16.01■□□□□ 0.15
SPTLC2-205ENST00000556607 PROSER2Q86WR7 435 aaPredicted RBP16.01■□□□□ 0.15
SPTLC2-205ENST00000556607 RBM33Q96EV2 1170 aaKnown RBP16■□□□□ 0.15
SPTLC2-205ENST00000556607 ALKQ9UM73 1620 aa16■□□□□ 0.15
SPTLC2-205ENST00000556607 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.99■□□□□ 0.15
SPTLC2-205ENST00000556607 RRBP1Q9P2E9 1410 aaKnown RBP15.99■□□□□ 0.15
SPTLC2-205ENST00000556607 SPHKAPQ2M3C7 1700 aa15.98■□□□□ 0.15
SPTLC2-205ENST00000556607 PLEKHG1Q9ULL1 1385 aa15.98■□□□□ 0.15
SPTLC2-205ENST00000556607 ZFYVE9O95405 1425 aa15.97■□□□□ 0.15
SPTLC2-205ENST00000556607 TRIM52Q96A61 297 aa15.97■□□□□ 0.15
SPTLC2-205ENST00000556607 TMEM94Q12767 1356 aa15.97■□□□□ 0.15
SPTLC2-205ENST00000556607 ZNF326Q5BKZ1 582 aaKnown RBP15.96■□□□□ 0.15
SPTLC2-205ENST00000556607 CHD2O14647 1828 aaKnown RBP15.95■□□□□ 0.14
SPTLC2-205ENST00000556607 MED1Q15648 1581 aaPredicted RBP15.94■□□□□ 0.14
SPTLC2-205ENST00000556607 NWD1Q149M9 1564 aa15.93■□□□□ 0.14
SPTLC2-205ENST00000556607 C14orf37Q86TY3 774 aa15.93■□□□□ 0.14
SPTLC2-205ENST00000556607 PHF23Q9BUL5 403 aaPredicted RBP15.93■□□□□ 0.14
SPTLC2-205ENST00000556607 NAIPQ13075 1403 aa15.93■□□□□ 0.14
SPTLC2-205ENST00000556607 NKTRP30414 1462 aaKnown RBP15.92■□□□□ 0.14
SPTLC2-205ENST00000556607 MSH6P52701 1360 aa15.92■□□□□ 0.14
SPTLC2-205ENST00000556607 TBX22Q9Y458 520 aa15.92■□□□□ 0.14
SPTLC2-205ENST00000556607 KIF1BO60333 1816 aa15.91■□□□□ 0.14
SPTLC2-205ENST00000556607 ROBO1Q9Y6N7 1651 aa15.89■□□□□ 0.13
SPTLC2-205ENST00000556607 DIP2AQ14689 1571 aa15.88■□□□□ 0.13
SPTLC2-205ENST00000556607 SOCS7O14512 581 aa15.88■□□□□ 0.13
SPTLC2-205ENST00000556607 CLTCL1P53675 1640 aa15.87■□□□□ 0.13
SPTLC2-205ENST00000556607 ADAMTS13Q76LX8 1427 aa15.87■□□□□ 0.13
SPTLC2-205ENST00000556607 SLC4A1APQ9BWU0 796 aaKnown RBP15.87■□□□□ 0.13
SPTLC2-205ENST00000556607 TRPM2O94759 1503 aa15.87■□□□□ 0.13
SPTLC2-205ENST00000556607 HFM1A2PYH4 1435 aa15.86■□□□□ 0.13
SPTLC2-205ENST00000556607 FAM135BQ49AJ0 1406 aa15.86■□□□□ 0.13
SPTLC2-205ENST00000556607 SLAIN2Q9P270 581 aa15.85■□□□□ 0.13
SPTLC2-205ENST00000556607 AMOTL2Q9Y2J4 779 aa15.85■□□□□ 0.13
SPTLC2-205ENST00000556607 PIK3R4Q99570 1358 aa15.84■□□□□ 0.13
SPTLC2-205ENST00000556607 PHLPP1O60346 1717 aa15.82■□□□□ 0.12
SPTLC2-205ENST00000556607 ATF3P18847 181 aa15.82■□□□□ 0.12
SPTLC2-205ENST00000556607 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.82■□□□□ 0.12
SPTLC2-205ENST00000556607 NRXN3Q9Y4C0 1643 aa15.81■□□□□ 0.12
SPTLC2-205ENST00000556607 NEXMIFQ5QGS0 1516 aa15.8■□□□□ 0.12
SPTLC2-205ENST00000556607 NCOA3Q9Y6Q9 1424 aa15.8■□□□□ 0.12
SPTLC2-205ENST00000556607 SETBP1Q9Y6X0 1596 aa15.79■□□□□ 0.12
SPTLC2-205ENST00000556607 PTPRUQ92729 1446 aa15.79■□□□□ 0.12
SPTLC2-205ENST00000556607 FOXD1Q16676 465 aa15.79■□□□□ 0.12
SPTLC2-205ENST00000556607 CADPS2Q86UW7 1296 aa15.79■□□□□ 0.12
SPTLC2-205ENST00000556607 C19orf44Q9H6X5 657 aa15.79■□□□□ 0.12
SPTLC2-205ENST00000556607 VGFO15240 615 aaPredicted RBP15.77■□□□□ 0.12
SPTLC2-205ENST00000556607 METP08581 1390 aa15.76■□□□□ 0.11
SPTLC2-205ENST00000556607 XRN1Q8IZH2 1706 aaKnown RBP15.76■□□□□ 0.11
SPTLC2-205ENST00000556607 MPHOSPH9Q99550 1183 aa15.74■□□□□ 0.11
SPTLC2-205ENST00000556607 PPLO60437 1756 aa15.74■□□□□ 0.11
SPTLC2-205ENST00000556607 RGL3Q3MIN7 710 aa15.73■□□□□ 0.11
SPTLC2-205ENST00000556607 RPGRIP1LQ68CZ1 1315 aa15.72■□□□□ 0.11
SPTLC2-205ENST00000556607 CCDC144AA2RUR9 1427 aa15.72■□□□□ 0.11
SPTLC2-205ENST00000556607 JCADQ9P266 1359 aa15.71■□□□□ 0.11
SPTLC2-205ENST00000556607 COL16A1Q07092 1604 aaPredicted RBP15.7■□□□□ 0.1
SPTLC2-205ENST00000556607 NALCNQ8IZF0 1738 aa15.69■□□□□ 0.1
SPTLC2-205ENST00000556607 MEX3CQ5U5Q3 659 aaKnown RBP15.69■□□□□ 0.1
SPTLC2-205ENST00000556607 DCCP43146 1447 aa15.68■□□□□ 0.1
SPTLC2-205ENST00000556607 SETD1AO15047 1707 aaKnown RBP15.68■□□□□ 0.1
SPTLC2-205ENST00000556607 BRINP3Q76B58 766 aa15.68■□□□□ 0.1
SPTLC2-205ENST00000556607 RGS17Q9UGC6 210 aaPredicted RBP15.68■□□□□ 0.1
SPTLC2-205ENST00000556607 SETD5Q9C0A6 1442 aa15.68■□□□□ 0.1
SPTLC2-205ENST00000556607 AHDC1Q5TGY3 1603 aaPredicted RBP15.67■□□□□ 0.1
SPTLC2-205ENST00000556607 ACIN1Q9UKV3 1341 aaKnown RBP15.67■□□□□ 0.1
SPTLC2-205ENST00000556607 ADGRL3Q9HAR2 1447 aa15.66■□□□□ 0.1
SPTLC2-205ENST00000556607 MST1RQ04912 1400 aa15.65■□□□□ 0.1
SPTLC2-205ENST00000556607 ASXL1Q8IXJ9 1541 aa15.64■□□□□ 0.09
SPTLC2-205ENST00000556607 NUTM2BA6NNL0 878 aaPredicted RBP15.64■□□□□ 0.09
SPTLC2-205ENST00000556607 NUTM2EB1AL46 878 aaPredicted RBP15.64■□□□□ 0.09
SPTLC2-205ENST00000556607 NUTM2AQ8IVF1 878 aaPredicted RBP15.64■□□□□ 0.09
SPTLC2-205ENST00000556607 SPATA31A6Q5VVP1 1343 aa15.64■□□□□ 0.09
SPTLC2-205ENST00000556607 ADGRF5Q8IZF2 1346 aa15.64■□□□□ 0.09
SPTLC2-205ENST00000556607 SHPRHQ149N8 1683 aa15.63■□□□□ 0.09
SPTLC2-205ENST00000556607 IFT172Q9UG01 1749 aa15.63■□□□□ 0.09
SPTLC2-205ENST00000556607 POTEAQ6S8J7 498 aa15.63■□□□□ 0.09
SPTLC2-205ENST00000556607 STK26Q9P289 416 aa15.63■□□□□ 0.09
SPTLC2-205ENST00000556607 ROBO2Q9HCK4 1378 aa15.62■□□□□ 0.09
SPTLC2-205ENST00000556607 PTCH1Q13635 1447 aa15.62■□□□□ 0.09
SPTLC2-205ENST00000556607 DDX17Q92841 729 aaKnown RBP15.62■□□□□ 0.09
SPTLC2-205ENST00000556607 ANKRD30BQ9BXX2 1392 aa15.62■□□□□ 0.09
SPTLC2-205ENST00000556607 RAB3GAP2Q9H2M9 1393 aa15.62■□□□□ 0.09
SPTLC2-205ENST00000556607 NHSL1Q5SYE7 1610 aa15.61■□□□□ 0.09
SPTLC2-205ENST00000556607 LRRC59Q96AG4 307 aaKnown RBP15.6■□□□□ 0.09
SPTLC2-205ENST00000556607 SPATA31E1Q6ZUB1 1445 aa15.6■□□□□ 0.09
SPTLC2-205ENST00000556607 C1orf167Q5SNV9 1468 aa15.59■□□□□ 0.09
SPTLC2-205ENST00000556607 LRP6O75581 1613 aa15.59■□□□□ 0.09
SPTLC2-205ENST00000556607 TMEM132EQ6IEE7 984 aa15.58■□□□□ 0.08
SPTLC2-205ENST00000556607 ORAI2Q96SN7 254 aa15.58■□□□□ 0.08
SPTLC2-205ENST00000556607 ZNF772Q68DY9 489 aaPredicted RBP15.56■□□□□ 0.08
SPTLC2-205ENST00000556607 WAPLQ7Z5K2 1190 aa15.56■□□□□ 0.08
SPTLC2-205ENST00000556607 NUTM2FA1L443 756 aa15.55■□□□□ 0.08
SPTLC2-205ENST00000556607 ESCO1Q5FWF5 840 aa15.55■□□□□ 0.08
SPTLC2-205ENST00000556607 PIK3C2GO75747 1445 aa15.54■□□□□ 0.08
SPTLC2-205ENST00000556607 KNDC1Q76NI1 1749 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms